CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400079686	Potato	cytosol	25.2	96.18
PGSC0003DMT400069308	Potato	golgi, vacuole	29.66	89.56
KRH41895	Soybean	nucleus	85.26	83.81
Os03t0719500-02	Rice	cytosol, nucleus	45.22	73.96
KRH09504	Soybean	nucleus	78.62	73.28
KRH38978	Soybean	nucleus	77.71	72.93
KRH63030	Soybean	cytosol, nucleus	16.92	70.19
Solyc03g098150.2.1	Tomato	nucleus	71.06	67.04
GSMUA_Achr2P21700_001	Banana	nucleus	63.33	62.65
Solyc06g072340.2.1	Tomato	nucleus	68.52	62.18
CDX72990	Canola	nucleus	59.87	61.96
GSMUA_Achr3P02060_001	Banana	nucleus	55.69	61.57
CDX96477	Canola	nucleus	59.96	61.13
CDY11106	Canola	nucleus	63.51	61.01
Bra015990.1-P	Field mustard	nucleus	59.51	60.61
AT1G73450.1	Thale cress	nucleus	63.33	60.42
KXG37702	Sorghum	nucleus	60.51	60.4
AT1G73460.2	Thale cress	nucleus	63.6	59.79
HORVU4Hr1G008530.1	Barley	nucleus	59.51	59.35
TraesCS4B01G051900.1	Wheat	nucleus	59.6	59.22
TraesCS4A01G263100.1	Wheat	nucleus	59.51	59.19
TraesCS4D01G052100.1	Wheat	nucleus	59.6	59.12
CDX68227	Canola	nucleus	63.88	58.99
Bra003844.1-P	Field mustard	nucleus	63.69	58.92
CDX92157	Canola	nucleus	54.69	58.81
GSMUA_Achr11P...	Banana	nucleus	58.6	58.71
Bra022240.1-P	Field mustard	nucleus	55.41	58.61
Zm00001d013405_P004	Maize	nucleus	58.87	57.56
CDX95825	Canola	nucleus	54.23	56.87
Zm00001d033798_P030	Maize	mitochondrion	59.69	56.65
AT3G17750.1	Thale cress	nucleus	58.33	56.33
PGSC0003DMT400079685	Potato	nucleus	43.04	54.18
VIT_01s0011g01590.t01	Wine grape	mitochondrion	75.43	45.75
KRH14940	Soybean	nucleus	28.75	44.51
KRH73194	Soybean	nucleus	29.12	44.02
KRH54290	Soybean	cytosol, nucleus	10.55	27.29
KRH63654	Soybean	nucleus	10.55	27.29
KRH61991	Soybean	cytosol	8.01	26.91
KRH57157	Soybean	cytosol	10.46	26.74
KRH52649	Soybean	nucleus	9.55	26.05
KRH67569	Soybean	nucleus	10.37	25.68
KRH39422	Soybean	cytosol	10.1	24.94
KRH28929	Soybean	nucleus	10.1	24.94
KRH03872	Soybean	nucleus	10.65	24.79
KRH76530	Soybean	nucleus	9.92	24.49
KRH07798	Soybean	cytosol	9.92	24.49
KRG95853	Soybean	cytosol	5.91	22.65
KRG94066	Soybean	cytosol	2.64	21.97
KRH32624	Soybean	nucleus	10.55	21.21
KRH20002	Soybean	nucleus	9.92	21.0
KRH22757	Soybean	nucleus	10.28	20.7
KRH26554	Soybean	nucleus	10.19	20.55
KRH25147	Soybean	mitochondrion	9.1	18.08
KRH07651	Soybean	nucleus	14.83	17.14
KRH45354	Soybean	nucleus	14.83	17.03
KRH35970	Soybean	nucleus	15.01	16.55
KRG90793	Soybean	nucleus	14.65	16.28
KRH75392	Soybean	nucleus	9.19	11.77

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100797095	MapMan:18.4.3.3	Gene3D:3.30.200.20	EMBL:ACUP02003368	ncoils:Coil
EnsemblPlantsGene:GLYMA_05G248500	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	UniProt:I1K586	InterPro:IPR000719	EnsemblPlants:KRH60590
ProteinID:KRH60590	ProteinID:KRH60590.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24058	PANTHER:PTHR24058:SF23	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI000233A851	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:42156880..42168695

Molecular Weight (calculated)

123349.0 Da

IEP (calculated)

4.541

GRAVY (calculated)

-0.617

Length

1099 amino acids

Sequence
(BLAST)

0001: MADSVDVILD FLRRNRFTRA EAALLTEINN LPDLNANPQG LELIVKEIEC GNGNAHLQAT SAPSILFSNT SEEDFLYSRN FNPSTVPVKP SVSQTNEAVD
0101: VIAANTNSKS WSVEENAVSM WPASSSKTSV VQSKQPMELD RQLKFNTPSL KVNFTDYPWS RTDDNMNSSS DSAKDCSVKT IFPFSKGDMS SSFGAVTYSD
0201: KKEEKKKVEI SDTRTSSIKE QVGELGRPIY LVKTPGSSEQ KIIGSLSFPL LPENQKEEFP SLPPVKLKSD DKPLVVNWEE KFERDGPTSK LPGADSTLLI
0301: GSYLDVPIGQ EINPSGMRRA TGGSWLSVSQ GIAEDTSDLV SGFATVGDGL SESIDYPNEY WDSDEYDDDE DVGYMRQPIE DEAWFLAHEI DYPSDNEKGT
0401: GHGSVPDPQE RGPAKDEDDD QSFAEEDSYF SGERYLQENN VVPVTTTDDP IGVTLTEYGR TNDNDLMAQY DGQLMDEEEL NLMCAEPVWR GFVPQTNELI
0501: MLGDGRVLND NLRSRLEDIN MDDDQHGSVR SIGVGINSDA ADIGSEVRES LVGGSSEGDL EYFHDRDAGL GGSRHSHHDL DKKSTNKSNK NKNNEKSESN
0601: KYVIGCDKDA PLQMKTHGDG NFSFPLSLKD GQMIQASTNK SLWSNNGNAD DADDCLSAIV ETDDMLALWR RKSSDSSPVK SSRDENNANF VRSTNSSPTT
0701: VSNYGYSERE HVKVEEDEKT GIAREDDLGA SLEDEEVAAV QEQVRQIKAQ EEEFETFNLK IVHRKNRTGF EEDKNFHVVL NSVIAGRYHV TEYLGSAAFS
0801: KAIQAHDLHT GMDVCVKIIK NNKDFFDQSL DEIKLLKYVN KHDPADKYHI LRLYDYFYYR EHLLIVCELL KANLYEFHKF NRESGGEVYF TMPRLQSITI
0901: QCLEALQFLH SLGLIHCDLK PENILVKSYS RCEVKVIDLG SSCFETDHLC SYVQSRSYRA PEVILGLPYD KKIDIWSLGC ILAELCTGNV LFQNDSPATL
1001: LARVIGIIDP IDQSMLAKGR DTYKYFTKNH MLYERNQETN RLEYLVPKKT SLRHRLPMGD QGFIDFVAHL LEVNPKKRPS ASEALKHPWL SYPYEPISS

Best Arabidopsis Sequence Match ( AT1G73450.1 )
(BLAST)

0001: MADQSSVDGI LEFLRNNRFS NAEEALRNEL SNRSDINGFL QKLMLEEKDS SKDSNERANG KELRRSGSRD SEVSKELVVK EVDCGTSTTG SVIKWENGAA
0101: AENPSKKETF VPSEMSFTFS KNSGDAAAPP DAHSYEFTSG NGTLEPYGNI DDNSSSSLVD SYAIEQLADI DKKIVETGED IVFFGNKSTL LSGNSSKGNS
0201: GSKIKKPNEI DQLGEIFGKH DSYKGSVLLR TEDVIDTSEN WKERSVKTLF QSSRGDASNS YNLVSSSDKR EGKKKAEISD VRVAIKEQES EVARALFFGK
0301: SQSTFDDKNI SSLGFPLVFD TRKEEFPRLP PVKLKSEDNP LSLHCEEKFE RDGSGPRLIN DDEALLIGSY LDVPIGQEIS SSGGKKSGGG NWLSVSQGIA
0401: DLVSGFATIG DGLSESVDYR NEYWDSDEYE DDGDIGYVRQ PIEDETWFLA HEIDYPSDHE KGTTRGSPDH HDRDANKDED DQSYAEDESY LSGERYLQSK
0501: DAEPISSEND RRLTVSEIYP ACKKNDLLAQ YDGQLMDEDL LNSMRTEPVW QGFVAQSNEL VMLGDKKGIN VHRKSHLDDV YVEDDQHDSV RSIGVGINSD
0601: AADFGSEVRD SLAGGSSEGD FEYSRDHDPV ASRFKQLYSE SDKKHIDGQN KNKQKASKND SGGSFHVKIQ TDGDFSFGSS QKDGQLMHAE SSKSLWSGNR
0701: ETVTRDRNTE LLSASTATDD MVATWRQKSS DSSSSRSSVK ENNATSIKSV NSSPSSLSNY ARGERKHAEK ENDSSEREDG HATALDDEEA VAVQEQVRQI
0801: KAQEEEFETF DLKIVHRKNR TGFEEEKNFN VVLNSVIAGR YHVTEYLGSA AFSKAIQAHD LQTGMDVCIK IIKNNKDFFD QSLDEIKLLK YVNKHDPADK
0901: YHLLRLYDYF YYREHLLIVC ELLKANLYEF HKFNRESGGE VYFTMPRLQS ITIQCLESLQ FLHGLGLIHC DLKPENILVK SYSRCEIKVI DLGSSCFETD
1001: HLCSYVQSRS YRAPEVILGL PYDKKIDVWS LGCILAELCT GNVLFQNDSP ASLLARVMGI VGSFDNEMLT KGRDSHKYFT KNRMLYERNQ ESNRLEYLIP
1101: KRTSLRHRLP MGDQGFTDFV AHLLEINPKK RPSAAEALKH PWLSYPYEPI SA

Arabidopsis Description

Protein kinase superfamily protein [Source:TAIR;Acc:AT1G73450]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.