CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
plasma membrane 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH73194	Soybean	nucleus	93.8	91.61
KRH63030	Soybean	cytosol, nucleus	33.66	90.19
AT2G40120.1	Thale cress	cytosol	53.1	66.14
CDX93215	Canola	cytosol	52.11	64.57
CDX74804	Canola	cytosol	53.38	64.57
CDY65761	Canola	nucleus	53.1	64.33
Bra004984.1-P	Field mustard	cytosol	53.1	64.12
CDY07061	Canola	cytosol	51.55	63.76
VIT_13s0067g00960.t01	Wine grape	cytosol	63.24	61.68
Bra017026.1-P	Field mustard	cytosol	47.46	60.61
Solyc06g051510.2.1	Tomato	cytosol	44.08	60.31
PGSC0003DMT400043636	Potato	cytosol	54.37	59.02
Os05t0466900-01	Rice	cytosol, nucleus	41.69	48.93
EES01706	Sorghum	nucleus	47.61	46.88
OQU78157	Sorghum	nucleus, plastid	42.54	46.6
TraesCS3D01G345700.2	Wheat	nucleus	46.9	45.99
TraesCS3A01G351500.1	Wheat	nucleus	46.62	45.97
Zm00001d042979_P007	Maize	nucleus	47.89	45.82
Os01t0832900-01	Rice	nucleus	46.9	45.68
TraesCS3B01G384000.1	Wheat	nucleus	46.34	45.19
HORVU1Hr1G071160.1	Barley	nucleus	44.65	44.52
TraesCS1A01G292100.1	Wheat	cytosol	44.51	44.51
TraesCS1B01G301500.1	Wheat	cytosol	44.37	44.49
TraesCS1D01G290600.1	Wheat	cytosol	44.37	44.49
GSMUA_Achr4P18950_001	Banana	nucleus	43.94	44.44
Zm00001d010578_P003	Maize	cytosol, plastid	44.08	44.27
GSMUA_Achr10P...	Banana	nucleus	39.01	43.01
Zm00001d012452_P004	Maize	nucleus	45.21	41.21
KRH60590	Soybean	nucleus	44.51	28.75
KRH61991	Soybean	cytosol	12.82	27.83
KRH41895	Soybean	nucleus	41.97	26.65
KRH38978	Soybean	nucleus	43.94	26.64
KRH09504	Soybean	nucleus	44.08	26.55
KRH52649	Soybean	nucleus	14.93	26.3
KRH54290	Soybean	cytosol, nucleus	15.49	25.88
KRH63654	Soybean	nucleus	15.49	25.88
KRH39422	Soybean	cytosol	15.92	25.39
KRH28929	Soybean	nucleus	15.92	25.39
KRH57157	Soybean	cytosol	15.21	25.12
KRH76530	Soybean	nucleus	15.63	24.94
KRH07798	Soybean	cytosol	15.49	24.72
KRH67569	Soybean	nucleus	15.07	24.1
KRH03872	Soybean	nucleus	15.21	22.88
KRG94066	Soybean	cytosol	4.23	22.73
KRG95853	Soybean	cytosol	8.59	21.25
KRH26554	Soybean	nucleus	15.49	20.18
KRH22757	Soybean	nucleus	15.49	20.15
KRH32624	Soybean	nucleus	15.21	19.74
KRH20002	Soybean	nucleus	14.23	19.46
KRH25147	Soybean	mitochondrion	14.08	18.08
KRH45354	Soybean	nucleus	20.85	15.46
KRH07651	Soybean	nucleus	20.56	15.35
KRH35970	Soybean	nucleus	18.87	13.44
KRG90793	Soybean	nucleus	18.45	13.25
KRH75392	Soybean	nucleus	11.13	9.21

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100795722	MapMan:18.4.3.3	Gene3D:3.30.200.20	EMBL:ACUP02008544	EnsemblPlantsGene:GLYMA_14G058900
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	UniProt:I1M7T1	InterPro:IPR000719	EnsemblPlants:KRH14940	ProteinID:KRH14940
ProteinID:KRH14940.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24058
PANTHER:PTHR24058:SF56	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000233B6C6
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr14:+:4758268..4763122

Molecular Weight (calculated)

81521.1 Da

IEP (calculated)

4.408

GRAVY (calculated)

-0.515

Length

710 amino acids

Sequence
(BLAST)

001: MAVSNGVEAV LEFLRKNGLS EAESALRQDI IENNDLGNFD YEKFFFPMVP PPPPVRVRSF SRLSELSADG NCSKSSSDEF VSIGSPTSRV SSSEFINPYG
101: IRSSSQTQND SASSSERLSQ FGTARDYHDF EMQNEPYWYN EKDDDYFMTP SFEGPDFFAC QSEDKFVMTA ETENQHDNSL DLVYNSEEFL LKGNGNGGFM
201: DKACLYNHSS VRDGNATYSK EYCHVDNNNL FEGELEGKAE KHTVACSCEV PFCKSSPGGS CSLDPTNFGY PNLKEIHLKF GDINSFDSTS ELTVNQSFDY
301: YTKNDSSKEY NGPYDLTIKV NQKDLPNGLD TYKARDGGEL AEECQDPEIT ADGEDTTDDE LLKYTQEEEY EVFDLRIIHR KNRTGFEENK ELPIVLNTVL
401: AGRYYVTEYL GSAAFSRVVQ AHDLQTGIDV CLKIIKNDKD FFDQSLDEIK LLKLVNKHDP ADLHHFLRLY DYFYHQEHLF IVTELLQANL YEFQKFKQES
501: GGEEYFTLNR LQLITRQCLE ALQYLHSLGI VHCDLKPENI LIKSYRRCEI KVIDLGSSCF QTDNLCLYVQ SRSYRAPEVM LGLQYDEKID IWSLGCILAE
601: LCSGEVLFPN DAVVMILARM IGMFGSIDME MLVKGQETHK YFTKEYDIYY VNEETDQLEY IIPEESSLEQ HLQVTDTTFI DFVRYLLSIN PKRRPTARQA
701: LRHPWLSYVY

Best Arabidopsis Sequence Match ( AT2G40120.1 )
(BLAST)

001: MAVDVKSVLE FLRRNGLTEA ESALRDDINE KNKLASFDFE KFLFPIPTPI KITASSRPSD SGGDGSNSKS SSSDDEFVSL DSSTSGFCSS SGFVNPYGDS
101: SSSSDGQSQF GTARTYPEWS EFYLHNETED EDEFMSPAFR ESDCFILPEN AEDKFITDNQ FENSLGVYDR SSSQGSLTEA SLDYLDKPFL LDIGLEDKTD
201: ELDLKTGDQL NVTDEEVDVV HEVEDEYEVF NLRIIHWKNR TGFEENKDLP IVINTVIGGR YYITEYIGSA AFSKVVQAQD LHNGVDVCLK IIKNDKDFFD
301: QSLDEIKLLK HVNKHDPADE HHILRLYDYF YHQEHLFIVC ELLRANLYEF QKFNQESGGE PYFNLSRLQV ITRQCLDALV FLHGLGIIHC DLKPENILIK
401: SYKRCAVKII DLGSSCFRSD NLCLYVQSRS YRAPEVILGL PYDEKIDLWS LGCILAELCS GEVLFPNEAV AMILARIVAV LGPIETEMLE KGQETHKYFT
501: KEYDLYHLNE ESNEIEYIIT EESSLEEQLQ VSDELFLDFV RTLLDINPLR RPTALEALNH PWLSSSSSYN

Arabidopsis Description

Hypothetical Ser-Thr protein kinase [Source:UniProtKB/TrEMBL;Acc:Q9XEE4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.