CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG95876
KRG95883
KRH12155
KRH24737
KRH29744
KRH37161
KRH42195
KRH58317
KRH67593
KRH67596

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G32660.1	KRH12155	AT1G30860.1	21798944
AT4G32660.1	KRH37161	AT1G30860.1	21798944
AT4G32660.1	KRH24737	AT2G29210.1	21798944
AT4G32660.1	KRH29744	AT2G29210.1	21798944
AT4G32660.1	KRG95876	AT2G37340.1	21798944
AT4G32660.1	KRG95883	AT2G37340.1	21798944
AT4G32660.1	KRH42195	AT2G37340.1	21798944
AT4G32660.1	KRH58317	AT2G37340.1	21798944
AT4G32660.1	KRH67593	AT2G37340.1	21798944
AT4G32660.1	KRH67596	AT2G37340.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH52649	Soybean	nucleus	84.09	27.54
VIT_04s0008g04220.t01	Wine grape	nucleus	67.42	22.14
Os01t0590900-01	Rice	nucleus	64.39	21.91
EES00987	Sorghum	mitochondrion	63.64	21.76
TraesCS3D01G214800.2	Wheat	cytosol	63.64	21.65
TraesCS3B01G242600.2	Wheat	cytosol	63.64	21.65
TraesCS3A01G212200.2	Wheat	cytosol	63.64	21.65
Zm00001d044338_P003	Maize	mitochondrion	63.64	21.43
KRG95853	Soybean	cytosol	45.45	20.91
HORVU3Hr1G051340.19	Barley	golgi, plasma membrane, plastid	64.39	20.24
AT4G32660.1	Thale cress	nucleus	59.85	19.75
Bra011368.1-P	Field mustard	nucleus	59.09	19.6
CDX75268	Canola	nucleus	59.09	19.6
CDX68873	Canola	nucleus	58.33	19.3
GSMUA_Achr8P04030_001	Banana	mitochondrion	63.64	18.26
KRH54290	Soybean	cytosol, nucleus	58.33	18.12
KRH63654	Soybean	nucleus	57.58	17.88
KRH57157	Soybean	cytosol	56.82	17.44
KRH67569	Soybean	nucleus	56.82	16.89
KRH03872	Soybean	nucleus	56.82	15.89
KRH61991	Soybean	cytosol	33.33	13.46
Zm00001d011258_P001	Maize	cytosol, nucleus, plasma membrane	37.12	12.37
KRH39422	Soybean	cytosol	22.73	6.74
KRH07798	Soybean	cytosol	21.21	6.29
KRH76530	Soybean	nucleus	21.21	6.29
KRH28929	Soybean	nucleus	21.21	6.29
KRH26554	Soybean	nucleus	24.24	5.87
KRH22757	Soybean	nucleus	24.24	5.86
KRH20002	Soybean	nucleus	22.73	5.78
KRH32624	Soybean	nucleus	23.48	5.67
KRH25147	Soybean	mitochondrion	22.73	5.42
KRH63030	Soybean	cytosol, nucleus	9.09	4.53
KRH73194	Soybean	nucleus	23.48	4.26
KRH14940	Soybean	nucleus	22.73	4.23
KRH07651	Soybean	nucleus	26.52	3.68
KRH45354	Soybean	nucleus	26.52	3.66
KRG90793	Soybean	nucleus	27.27	3.64
KRH35970	Soybean	nucleus	27.27	3.61
KRH60590	Soybean	nucleus	21.97	2.64
KRH09504	Soybean	nucleus	21.97	2.46
KRH38978	Soybean	nucleus	21.21	2.39
KRH41895	Soybean	nucleus	17.42	2.06
KRH75392	Soybean	nucleus	2.27	0.35

Protein Annotations

EMBL:ACUP02011710	EnsemblPlants:KRG94066	EnsemblPlantsGene:GLYMA_19G059500	Gene3D:1.10.510.10	InterPro:Kinase-like_dom_sf	PANTHER:PTHR24058
PANTHER:PTHR24058:SF44	ProteinID:KRG94066	ProteinID:KRG94066.1	SUPFAM:SSF56112	UniParc:UPI0006EDBB12	UniProt:A0A0R0ESA1
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr19:-:11516645..11518219

Molecular Weight (calculated)

15366.6 Da

IEP (calculated)

9.885

GRAVY (calculated)

-0.439

Length

132 amino acids

Sequence
(BLAST)

001: MLHIASHSCT TFYLKIWFQW EALFQTHENL EHLAMMERVL GPIPEHMIHR SNKRAEKYFK RGSHLKWPEG GVSRERISAV KKLGHLKDIV SRNVDSSMSS
101: LTDLLHGLLT YDPTKRLTAC QALDHPFFRN PT

Best Arabidopsis Sequence Match ( AT4G32660.1 )
(BLAST)

001: MIANGFESMD KERVRKRPRM TWDEAPAEPE AKRAVIKGHG SDGRILSPPL RDDDRDGHYV FSLRDNLTPR YKILSKMGEG TFGRVLECWD RDTKEYVAIK
101: IIRSIKKYRD AAMIEIDVLQ KLVKSDKGRT RCVQMKNWFD YRNHICIVFE KLGPSLFDFL KRNKYSAFPL ALVRDFGCQL LESVAYMHEL QLVHTDLKPE
201: NILLVSSENV KLPDNKRSAA NETHFRCLPK SSAIKLIDFG STVCDNRIHH SIVQTRHYRS PEVILGLGWS YQCDLWSIGC ILFELCTGEA LFQTHDNLEH
301: LAMMERALGP LPEHMTRKAS RGAEKYFRRG CRLNWPEGAN SRESIRAVKR LDRLKDMVSK HVDNTRSRFA DLLYGLLAYD PSERLTANEA LDHPFFKSSS

Arabidopsis Description

AFC3At4g32660 [Source:UniProtKB/TrEMBL;Acc:A1L4Y9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.