Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G29210.1 | KRH24737 | AT2G29210.1 | 21798944 |
| AT2G29210.1 | KRH29744 | AT2G29210.1 | 21798944 |
| AT2G29210.1 | KRH10674 | AT4G33690.1 | 21798944 |
| AT2G29210.1 | KRH21674 | AT4G33690.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH24737 | Soybean | nucleus | 85.92 | 88.43 |
| GSMUA_Achr9P03820_001 | Banana | cytosol | 7.1 | 79.27 |
| VIT_06s0004g05220.t01 | Wine grape | nucleus | 47.05 | 46.75 |
| Solyc09g030390.2.1 | Tomato | nucleus | 42.03 | 41.8 |
| PGSC0003DMT400071935 | Potato | nucleus | 39.74 | 41.27 |
| CDY65665 | Canola | nucleus | 36.57 | 41.0 |
| AT2G29210.1 | Thale cress | nucleus | 38.65 | 40.32 |
| CDY45430 | Canola | nucleus | 36.14 | 39.45 |
| Bra018407.1-P | Field mustard | nucleus | 35.7 | 38.74 |
| Os03t0270200-01 | Rice | nucleus | 35.37 | 38.57 |
| KXG39705 | Sorghum | nucleus | 35.15 | 36.59 |
| Zm00001d028579_P027 | Maize | nucleus | 35.7 | 36.09 |
| HORVU4Hr1G060270.6 | Barley | nucleus | 32.21 | 35.76 |
| TraesCS4B01G209700.1 | Wheat | nucleus | 32.21 | 35.71 |
| GSMUA_Achr10P... | Banana | nucleus | 32.86 | 35.66 |
| TraesCS4D01G210400.1 | Wheat | nucleus | 32.1 | 35.59 |
| TraesCS4A01G094800.1 | Wheat | nucleus | 31.99 | 35.56 |
| Zm00001d047831_P001 | Maize | nucleus | 8.41 | 21.57 |
Protein Annotations
| Gene3D:1.20.1390.10 | EntrezGene:100790051 | MapMan:17.3.1.2.2 | EMBL:ACUP02006818 | ncoils:Coil | EnsemblPlantsGene:GLYMA_11G136000 |
| GO:GO:0006139 | GO:GO:0006397 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | UniProt:I1LJY4 |
| InterPro:IPR002483 | EnsemblPlants:KRH29744 | ProteinID:KRH29744 | ProteinID:KRH29744.1 | PFAM:PF01480 | PFscan:PS51025 |
| InterPro:PWI_dom | InterPro:PWI_dom_sf | SMART:SM00311 | SUPFAM:SSF101233 | UniParc:UPI000233C871 | SEG:seg |
Description
hypothetical protein
Coordinates
chr11:-:10337110..10343502
Molecular Weight (calculated)
106081.0 Da
IEP (calculated)
11.661
GRAVY (calculated)
-1.548
Length
916 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGGFFRGTS ADQDTRFSNK QAKLMKSQKF APELEHLVDM TKVNMEVIKP WITRRVTELL GFEDEVLINF IHGLLDAKEV NGKEVQIQIT GFMEKNTGKF
101: MKELWMLLLS AQKNASGVPQ QFLDAKEEEL LKKKAESDLI ASEIQRKTDN EDREIMEERL KKLDGGFDSK DNDTASDPTL KLRDSGYREW DGKETDKRNG
201: VRARSRLSRS PHSPAVSISP HRGSPSRSMS KSFSNSRSYS GGRHRSRSIS RSPEAQGPSL SAERIRRSPR RRSISPQRHS PRRSPHRRIP YSRRSRSPSP
301: ERRRMHSPVH RRSPSFRRRR SPSPVRRHRS PSPVRRRRSP SPVRRRRSPS PVRRRRSPSP VRRRRSPSPV RRRRSPSPVR RRRSPSPVRR RRSPSPGRRH
401: RSPSPGRCHR SPSPLGQRRS LSPRRRRSLV TRHRSPSPVR RIPPTNVQNR SDSPMQSPSH IRQRYGSRTP SLSPSPLQRR SPIPSKQRSP NISPQRSPQD
501: EQSSQSPIRC VSPSPIRKNS PRHQKSPLHS SMGRVRTESV TRQPSSPLGS AIRDKCGKAS HYKSQDSMST PEKSPIQSVS QEARSETSSE GRSPHESPMK
601: QRRDKLSNEI NTNPLKKQRT QRPSRDSPDT RDEAEETHYS RESRDPKMNS SQKISKHFPV SKRKGSPAKY RHEEFSPERV SGHPASEHHY DNNDWSKKGQ
701: EIMRDKSSGK GNEFPAQKSS MNKETFSREK PQESYAVDIK KSDVKDQSHS NYAKSSYRHH KSETTQDLVG KGDRVNHNAS HDSVSEDSGK HRREGKDRKR
801: HKRSEKKYTS SDEDYSDDSE LEDRKEAKRR RKEEKKLQKE EKRRRCEEKR RRREERRAEK LKMKSKTDDI SGDEEAKRMD YHQSDSVVTP SEQKKLEIEL
901: RNKALESLKA KKGMNN
101: MKELWMLLLS AQKNASGVPQ QFLDAKEEEL LKKKAESDLI ASEIQRKTDN EDREIMEERL KKLDGGFDSK DNDTASDPTL KLRDSGYREW DGKETDKRNG
201: VRARSRLSRS PHSPAVSISP HRGSPSRSMS KSFSNSRSYS GGRHRSRSIS RSPEAQGPSL SAERIRRSPR RRSISPQRHS PRRSPHRRIP YSRRSRSPSP
301: ERRRMHSPVH RRSPSFRRRR SPSPVRRHRS PSPVRRRRSP SPVRRRRSPS PVRRRRSPSP VRRRRSPSPV RRRRSPSPVR RRRSPSPVRR RRSPSPGRRH
401: RSPSPGRCHR SPSPLGQRRS LSPRRRRSLV TRHRSPSPVR RIPPTNVQNR SDSPMQSPSH IRQRYGSRTP SLSPSPLQRR SPIPSKQRSP NISPQRSPQD
501: EQSSQSPIRC VSPSPIRKNS PRHQKSPLHS SMGRVRTESV TRQPSSPLGS AIRDKCGKAS HYKSQDSMST PEKSPIQSVS QEARSETSSE GRSPHESPMK
601: QRRDKLSNEI NTNPLKKQRT QRPSRDSPDT RDEAEETHYS RESRDPKMNS SQKISKHFPV SKRKGSPAKY RHEEFSPERV SGHPASEHHY DNNDWSKKGQ
701: EIMRDKSSGK GNEFPAQKSS MNKETFSREK PQESYAVDIK KSDVKDQSHS NYAKSSYRHH KSETTQDLVG KGDRVNHNAS HDSVSEDSGK HRREGKDRKR
801: HKRSEKKYTS SDEDYSDDSE LEDRKEAKRR RKEEKKLQKE EKRRRCEEKR RRREERRAEK LKMKSKTDDI SGDEEAKRMD YHQSDSVVTP SEQKKLEIEL
901: RNKALESLKA KKGMNN
001: MSGGFFRGTS AEQDTRFSNK QAKLMKSQKF APELENLVDI TKVKMDVMKP WIATRVTELL GIEDEVLINF IYGLLDGKVV NGKEIQITLT GFMEKNTGKF
101: MKELWTLLLS AQNNPSGVPQ QFLDARAAET KKKQEEANEI MKKREGDKKN IEHDILRKID SGVEHKETNG MDAKPSRDRP EDGRRADEKN GVKERRRDLI
201: PPRRGDASRS PLRGSRSRSI SKTNSGSKSY SGERKSRSTS QSSDASISPR KRRLSNSRRR SRSRSVRRSL SPRRRRIHSP FRSRSRSPIR RHRRPTHEGR
301: RQSPAPSRRR RSPSPPARRR RSPSPPARRR RSPSPPARRH RSPTPPARQR RSPSPPARRH RSPPPARRRR SPSPPARRRR SPSPPARRRR SPSPLYRRNR
401: SPSPLYRRNR SRSPLAKRGR SDSPGRSPSP VARLRDPTGA RLPSPSIEQR LPSPPVAQRL PSPPPRRAGL PSPPPAQRLP SPPPRRAGLP SPMRIGGSHA
501: ANHLESPSPS SLSPPGRKKV LPSPPVRRRR SLTPDEERVS LSQGGRHTSP SHIKQDGSMS PVRGRGKSSP SSRHQKARSP VRRRSPTPVN RRSRRSSSAS
601: RSPDRRRRRS PSSSRSPSRS RSPPVLHRSP SPRGRKHQRE RRSPGRLSEE QDRVQNSKLL KRTSVPDTDK RKQLPEKLLE VGRVEHYKEQ ERKSDKLSEK
701: RSVHRHHGSQ MSPVENSEGR SRPVSSKVKD SEQVEKEDNS DLDANLSCDS KDTIRHQIKD KNRRKNKRSS REEVSSDDNG SSDSDVDDRK EAKRRRKEEK
801: KTRKEEKKRR REERHRKREE RRGGKEKHKK QELSDTSEGE VEARPKIKKG EESDPKRLEI ELRNKALESL KAKKGISH
101: MKELWTLLLS AQNNPSGVPQ QFLDARAAET KKKQEEANEI MKKREGDKKN IEHDILRKID SGVEHKETNG MDAKPSRDRP EDGRRADEKN GVKERRRDLI
201: PPRRGDASRS PLRGSRSRSI SKTNSGSKSY SGERKSRSTS QSSDASISPR KRRLSNSRRR SRSRSVRRSL SPRRRRIHSP FRSRSRSPIR RHRRPTHEGR
301: RQSPAPSRRR RSPSPPARRR RSPSPPARRR RSPSPPARRH RSPTPPARQR RSPSPPARRH RSPPPARRRR SPSPPARRRR SPSPPARRRR SPSPLYRRNR
401: SPSPLYRRNR SRSPLAKRGR SDSPGRSPSP VARLRDPTGA RLPSPSIEQR LPSPPVAQRL PSPPPRRAGL PSPPPAQRLP SPPPRRAGLP SPMRIGGSHA
501: ANHLESPSPS SLSPPGRKKV LPSPPVRRRR SLTPDEERVS LSQGGRHTSP SHIKQDGSMS PVRGRGKSSP SSRHQKARSP VRRRSPTPVN RRSRRSSSAS
601: RSPDRRRRRS PSSSRSPSRS RSPPVLHRSP SPRGRKHQRE RRSPGRLSEE QDRVQNSKLL KRTSVPDTDK RKQLPEKLLE VGRVEHYKEQ ERKSDKLSEK
701: RSVHRHHGSQ MSPVENSEGR SRPVSSKVKD SEQVEKEDNS DLDANLSCDS KDTIRHQIKD KNRRKNKRSS REEVSSDDNG SSDSDVDDRK EAKRRRKEEK
801: KTRKEEKKRR REERHRKREE RRGGKEKHKK QELSDTSEGE VEARPKIKKG EESDPKRLEI ELRNKALESL KAKKGISH
Arabidopsis Description
At2g29210/F16P2.41 [Source:UniProtKB/TrEMBL;Acc:Q8L7W3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.