Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G29210.1 | KXG39705 | AT2G29210.1 | 21798944 |
| AT2G29210.1 | EER96069 | AT4G33690.1 | 21798944 |
| AT2G29210.1 | EER97413 | AT4G33690.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P03820_001 | Banana | cytosol | 7.61 | 81.71 |
| Zm00001d028579_P027 | Maize | nucleus | 82.61 | 80.24 |
| Os03t0270200-01 | Rice | nucleus | 64.09 | 67.14 |
| TraesCS4A01G094800.1 | Wheat | nucleus | 54.55 | 58.25 |
| TraesCS4D01G210400.1 | Wheat | nucleus | 54.66 | 58.23 |
| TraesCS4B01G209700.1 | Wheat | nucleus | 54.32 | 57.87 |
| HORVU4Hr1G060270.6 | Barley | nucleus | 54.2 | 57.82 |
| Zm00001d047831_P001 | Maize | nucleus | 20.8 | 51.26 |
| VIT_06s0004g05220.t01 | Wine grape | nucleus | 38.07 | 36.33 |
| GSMUA_Achr10P... | Banana | nucleus | 34.77 | 36.26 |
| CDY45430 | Canola | nucleus | 34.2 | 35.88 |
| AT2G29210.1 | Thale cress | nucleus | 35.34 | 35.42 |
| CDY65665 | Canola | nucleus | 32.84 | 35.37 |
| Bra018407.1-P | Field mustard | nucleus | 33.75 | 35.19 |
| KRH29744 | Soybean | nucleus | 36.59 | 35.15 |
| KRH24737 | Soybean | nucleus | 35.34 | 34.94 |
| PGSC0003DMT400071935 | Potato | nucleus | 34.77 | 34.69 |
| Solyc09g030390.2.1 | Tomato | nucleus | 35.8 | 34.2 |
Protein Annotations
| Gene3D:1.20.1390.10 | MapMan:17.3.1.2.2 | UniProt:A0A1B6QP73 | ncoils:Coil | GO:GO:0006139 | GO:GO:0006397 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | InterPro:IPR002483 | EnsemblPlants:KXG39705 | ProteinID:KXG39705 |
| ProteinID:KXG39705.1 | ProteinID:OQU92852.1 | PFAM:PF01480 | PFscan:PS51025 | PANTHER:PTHR23148 | InterPro:PWI_dom |
| InterPro:PWI_dom_sf | SMART:SM00311 | EnsemblPlantsGene:SORBI_3001G423700 | SUPFAM:SSF101233 | UniParc:UPI00081ADE35 | SEG:seg |
Description
hypothetical protein
Coordinates
chr1:+:70398858..70406291
Molecular Weight (calculated)
100852.0 Da
IEP (calculated)
11.900
GRAVY (calculated)
-1.677
Length
880 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGGFFRGTS ADQDTRFSNK QAKLLKTQKF APELDHLVDM SKVKMDVMKP WIAKRVTELL GFEDEVLINF IYGLLEEKEA DGKKIQIQLT GFMEKNTVKF
101: MKELWSLLLS AQQNASGVPQ QFLDEKEAEI QQKKAEDDRI AQEIQKKREK EAKDSELEKN KMTDGDAGNS RSFGDPVGSA LNSTNFNADE EKDNDFKRSL
201: RPKNRGSRRS RSISLSPRGR QRSISPRNNS RSPPRRSRSI DRHRRSSRRS PSPRHSVSPR RHSPRTTTSI SRRRSPYSRR GSPSLSRYPS PSSRRRSPRR
301: RKSPSSGPER SLSPRHRRSP ARAPRRSPSP TSRRSPVRRR FSPGRRPSPS PARRRPRSPS PGRRRPRSPS PGRRRPRSPS PRRRRLRSPS PGWRRPRSPS
401: PGRRRPRSPS PGRRRPRSPS PGRRRPRSPS PGRRRPWSRS PIRRRSPSPK RRRRSPSSPK TRSANRRSSP QGRRSITPKT SRSPDRSRRS LSRDIEKETN
501: GIPSIKDRDV HPRGQEQKSD DADRDVARIG GRHSPDSEHR LSKSLRSPNY EERNSKRDSS FKNSGKHIPS QGSADTSGDE EGSRARENAR KANSARRKTK
601: DFSAGLELKK VGAGDSSPRE KSPFSLRQSG KGVQKKHPDQ LSESSEDELV GTGIKRQTDS PEDSHGKQCS PTRIENDATY SKDGRNSEHV MRGLRDDSDD
701: AIDAKKYLSK VNEDSQLEDG SPLKKTKKRT YGNSHNDSGS SGSEERDKHR SHSEKRRHKK AHKHKKQYDD SSESDSEPDG KEAKKRRKEE KRLRKEERRR
801: RREERYRRRA ERHASKQKLK NTDTAAVPSD SEKDRDSDSD VAVRKRGSHA GREESDQKKL EIELREKALE TLRAKKAINN
101: MKELWSLLLS AQQNASGVPQ QFLDEKEAEI QQKKAEDDRI AQEIQKKREK EAKDSELEKN KMTDGDAGNS RSFGDPVGSA LNSTNFNADE EKDNDFKRSL
201: RPKNRGSRRS RSISLSPRGR QRSISPRNNS RSPPRRSRSI DRHRRSSRRS PSPRHSVSPR RHSPRTTTSI SRRRSPYSRR GSPSLSRYPS PSSRRRSPRR
301: RKSPSSGPER SLSPRHRRSP ARAPRRSPSP TSRRSPVRRR FSPGRRPSPS PARRRPRSPS PGRRRPRSPS PGRRRPRSPS PRRRRLRSPS PGWRRPRSPS
401: PGRRRPRSPS PGRRRPRSPS PGRRRPRSPS PGRRRPWSRS PIRRRSPSPK RRRRSPSSPK TRSANRRSSP QGRRSITPKT SRSPDRSRRS LSRDIEKETN
501: GIPSIKDRDV HPRGQEQKSD DADRDVARIG GRHSPDSEHR LSKSLRSPNY EERNSKRDSS FKNSGKHIPS QGSADTSGDE EGSRARENAR KANSARRKTK
601: DFSAGLELKK VGAGDSSPRE KSPFSLRQSG KGVQKKHPDQ LSESSEDELV GTGIKRQTDS PEDSHGKQCS PTRIENDATY SKDGRNSEHV MRGLRDDSDD
701: AIDAKKYLSK VNEDSQLEDG SPLKKTKKRT YGNSHNDSGS SGSEERDKHR SHSEKRRHKK AHKHKKQYDD SSESDSEPDG KEAKKRRKEE KRLRKEERRR
801: RREERYRRRA ERHASKQKLK NTDTAAVPSD SEKDRDSDSD VAVRKRGSHA GREESDQKKL EIELREKALE TLRAKKAINN
001: MSGGFFRGTS AEQDTRFSNK QAKLMKSQKF APELENLVDI TKVKMDVMKP WIATRVTELL GIEDEVLINF IYGLLDGKVV NGKEIQITLT GFMEKNTGKF
101: MKELWTLLLS AQNNPSGVPQ QFLDARAAET KKKQEEANEI MKKREGDKKN IEHDILRKID SGVEHKETNG MDAKPSRDRP EDGRRADEKN GVKERRRDLI
201: PPRRGDASRS PLRGSRSRSI SKTNSGSKSY SGERKSRSTS QSSDASISPR KRRLSNSRRR SRSRSVRRSL SPRRRRIHSP FRSRSRSPIR RHRRPTHEGR
301: RQSPAPSRRR RSPSPPARRR RSPSPPARRR RSPSPPARRH RSPTPPARQR RSPSPPARRH RSPPPARRRR SPSPPARRRR SPSPPARRRR SPSPLYRRNR
401: SPSPLYRRNR SRSPLAKRGR SDSPGRSPSP VARLRDPTGA RLPSPSIEQR LPSPPVAQRL PSPPPRRAGL PSPPPAQRLP SPPPRRAGLP SPMRIGGSHA
501: ANHLESPSPS SLSPPGRKKV LPSPPVRRRR SLTPDEERVS LSQGGRHTSP SHIKQDGSMS PVRGRGKSSP SSRHQKARSP VRRRSPTPVN RRSRRSSSAS
601: RSPDRRRRRS PSSSRSPSRS RSPPVLHRSP SPRGRKHQRE RRSPGRLSEE QDRVQNSKLL KRTSVPDTDK RKQLPEKLLE VGRVEHYKEQ ERKSDKLSEK
701: RSVHRHHGSQ MSPVENSEGR SRPVSSKVKD SEQVEKEDNS DLDANLSCDS KDTIRHQIKD KNRRKNKRSS REEVSSDDNG SSDSDVDDRK EAKRRRKEEK
801: KTRKEEKKRR REERHRKREE RRGGKEKHKK QELSDTSEGE VEARPKIKKG EESDPKRLEI ELRNKALESL KAKKGISH
101: MKELWTLLLS AQNNPSGVPQ QFLDARAAET KKKQEEANEI MKKREGDKKN IEHDILRKID SGVEHKETNG MDAKPSRDRP EDGRRADEKN GVKERRRDLI
201: PPRRGDASRS PLRGSRSRSI SKTNSGSKSY SGERKSRSTS QSSDASISPR KRRLSNSRRR SRSRSVRRSL SPRRRRIHSP FRSRSRSPIR RHRRPTHEGR
301: RQSPAPSRRR RSPSPPARRR RSPSPPARRR RSPSPPARRH RSPTPPARQR RSPSPPARRH RSPPPARRRR SPSPPARRRR SPSPPARRRR SPSPLYRRNR
401: SPSPLYRRNR SRSPLAKRGR SDSPGRSPSP VARLRDPTGA RLPSPSIEQR LPSPPVAQRL PSPPPRRAGL PSPPPAQRLP SPPPRRAGLP SPMRIGGSHA
501: ANHLESPSPS SLSPPGRKKV LPSPPVRRRR SLTPDEERVS LSQGGRHTSP SHIKQDGSMS PVRGRGKSSP SSRHQKARSP VRRRSPTPVN RRSRRSSSAS
601: RSPDRRRRRS PSSSRSPSRS RSPPVLHRSP SPRGRKHQRE RRSPGRLSEE QDRVQNSKLL KRTSVPDTDK RKQLPEKLLE VGRVEHYKEQ ERKSDKLSEK
701: RSVHRHHGSQ MSPVENSEGR SRPVSSKVKD SEQVEKEDNS DLDANLSCDS KDTIRHQIKD KNRRKNKRSS REEVSSDDNG SSDSDVDDRK EAKRRRKEEK
801: KTRKEEKKRR REERHRKREE RRGGKEKHKK QELSDTSEGE VEARPKIKKG EESDPKRLEI ELRNKALESL KAKKGISH
Arabidopsis Description
At2g29210/F16P2.41 [Source:UniProtKB/TrEMBL;Acc:Q8L7W3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.