Factsheet for Zm00001d011258_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, nucleus, plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d006417_P002
Zm00001d011004_P008
Zm00001d011005_P005
Zm00001d021532_P001
Zm00001d028579_P027
Zm00001d035551_P007
Zm00001d035552_P001
Zm00001d037543_P001
Zm00001d047831_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G32660.1	Zm00001d006417_P002	AT1G30860.1	21798944
AT4G32660.1	Zm00001d021532_P001	AT1G30860.1	21798944
AT4G32660.1	Zm00001d028579_P027	AT2G29210.1	21798944
AT4G32660.1	Zm00001d047831_P001	AT2G29210.1	21798944
AT4G32660.1	Zm00001d011004_P008	AT2G37340.1	21798944
AT4G32660.1	Zm00001d011005_P005	AT2G37340.1	21798944
AT4G32660.1	Zm00001d035551_P007	AT2G37340.1	21798944
AT4G32660.1	Zm00001d035552_P001	AT2G37340.1	21798944
AT4G32660.1	Zm00001d037543_P001	AT2G37340.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d044338_P003	Maize	mitochondrion	74.75	75.51
EES00987	Sorghum	mitochondrion	72.22	74.09
TraesCS3D01G214800.2	Wheat	cytosol	70.45	71.91
TraesCS3A01G212200.2	Wheat	cytosol	70.45	71.91
TraesCS3B01G242600.2	Wheat	cytosol	70.45	71.91
Os01t0590900-01	Rice	nucleus	68.43	69.85
HORVU3Hr1G051340.19	Barley	golgi, plasma membrane, plastid	69.7	65.71
KRH61991	Soybean	cytosol	49.75	60.24
KRH52649	Soybean	nucleus	58.84	57.82
VIT_04s0008g04220.t01	Wine grape	nucleus	57.83	56.97
GSMUA_Achr8P04030_001	Banana	mitochondrion	62.12	53.48
AT4G32660.1	Thale cress	nucleus	53.54	53.0
Bra011368.1-P	Field mustard	nucleus	52.78	52.51
CDX75268	Canola	nucleus	52.78	52.51
CDX68873	Canola	nucleus	52.78	52.38
Zm00001d042938_P003	Maize	cytosol	54.04	47.77
Zm00001d005361_P007	Maize	cytosol, plastid	49.75	46.68
Zm00001d017096_P005	Maize	cytosol	51.77	46.07
Zm00001d050970_P003	Maize	cytosol	51.52	45.74
KRG94066	Soybean	cytosol	12.37	37.12
Zm00001d006308_P001	Maize	plastid	23.23	21.7
Zm00001d013273_P003	Maize	nucleus	24.24	17.02
Zm00001d034010_P002	Maize	mitochondrion, nucleus	24.49	15.32
Zm00001d021342_P017	Maize	cytosol	23.23	12.6
Zm00001d010578_P003	Maize	cytosol, plastid	22.22	12.45
Zm00001d042979_P007	Maize	nucleus	23.23	12.4
Zm00001d006355_P011	Maize	cytosol	23.99	12.04
Zm00001d012452_P004	Maize	nucleus	20.96	10.65
Zm00001d002418_P030	Maize	nucleus, plastid	23.48	10.14
Zm00001d031231_P057	Maize	nucleus	23.99	9.81
Zm00001d017754_P031	Maize	nucleus, plastid	23.23	9.78
Zm00001d026246_P001	Maize	cytosol	21.46	9.26
Zm00001d041183_P004	Maize	nucleus	23.74	9.0
Zm00001d013405_P004	Maize	nucleus	23.99	8.45
Zm00001d033798_P030	Maize	mitochondrion	23.48	8.03

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100193018	MapMan:18.4.3.2	Gene3D:3.30.200.20	UniProt:A0A1D6FYD4	ProteinID:AQK96371.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24058	PANTHER:PTHR24058:SF44	InterPro:Prot_kinase_dom	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000843D44D	EnsemblPlantsGene:Zm00001d011258	EnsemblPlants:Zm00001d011258_P001	EnsemblPlants:Zm00001d011258_T001
SEG:seg	:	:	:	:	:

Description

Serine/threonine-protein kinase AFC3

Coordinates

chr8:+:144732264..144736633

Molecular Weight (calculated)

45304.6 Da

IEP (calculated)

6.648

GRAVY (calculated)

-0.432

Length

396 amino acids

Sequence
(BLAST)

001: MESSRSRKRT RQAHDCAAAP PPEREVVARG GASPPWREDD RDGHFVFDLG ENLTRRYKIL SKMGEGLGFL QSVVSSSAGY LRYYSNEEGY ELDFRSIRKY
101: RDAAMIEIDV LNRLAENEKY RSLCVQIQRW FDYRNHICIV FEKLGPSLYD FLKRNRYQPF PVELVREFGR QLLESVAYMH ELRLIHTDLK PENILLVSSE
201: YIKVPSTKKN SQGEMHFKCL PKSSAIKLID FGSTAFDNRN HNSIVSTRHY RAPEIILGLG WSFPCDIWSV GCILVELCSV RSLHTLYFSS TSLVIVFLTS
301: HFLGGSIVSD TRESGTPSND GEGFGTSTRG YDTESKVVTD QDPETYEPQL QDLVSRNADH SKVALVDLLY GLLRFEPSER LTAEEALDHP FFRNPT

Best Arabidopsis Sequence Match ( AT3G53570.1 )
(BLAST)

001: MQSSVYRDKA SSIAMILETQ RNVEFPHRIV DKRPRKRPRL TWDAAPPLLP PPPPPTVFQP PLYYGPEFAS GLVPNFVYPN MFYNGLPRQG SPPWRPDDKD
101: GHYVFVVGDT LTPRYQILSK MGEGTFGQVL ECFDNKNKEV VAIKVIRSIN KYREAAMIEI DVLQRLTRHD VGGSRCVQIR NWFDYRNHIC IVFEKLGPSL
201: YDFLRKNSYR SFPIDLVREL GRQLLESVAY MHDLRLIHTD LKPENILLVS SEYIKIPDYK FLSRPTKDGS YFKNLPKSSA IKLIDFGSTT FEHQDHNYIV
301: STRHYRAPEV ILGVGWNYPC DLWSIGCILV ELCSGEALFQ THENLEHLAM MERVLGPLPP HMVLRADRRS EKYFRRGAKL DWPEGATSRD SLKAVWKLPR
401: LPNLIMQHVD HSAGDLIDLL QGLLRYDPTE RFKAREALNH PFFTRSREQS IPPFNPNPHP FLYNQKN

Arabidopsis Description

AFC1AT3G53570 protein [Source:UniProtKB/TrEMBL;Acc:B9DH08]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.