Factsheet for GSMUA_Achr8P04030_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 6
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr4P33210_001
GSMUA_Achr6P15450_001
GSMUA_Achr7P00390_001
GSMUA_Achr9P03820_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G32660.1	GSMUA_Achr4P33210_001	AT1G30860.1	21798944
AT4G32660.1	GSMUA_Achr7P00390_001	AT1G30860.1	21798944
AT4G32660.1	GSMUA_Achr10P...	AT2G29210.1	21798944
AT4G32660.1	GSMUA_Achr9P03820_001	AT2G29210.1	21798944
AT4G32660.1	GSMUA_Achr10P...	AT2G37340.1	21798944
AT4G32660.1	GSMUA_Achr6P15450_001	AT2G37340.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES00987	Sorghum	mitochondrion	69.78	83.16
Os01t0590900-01	Rice	nucleus	68.91	81.7
TraesCS3D01G214800.2	Wheat	cytosol	68.48	81.19
TraesCS3B01G242600.2	Wheat	cytosol	68.48	81.19
TraesCS3A01G212200.2	Wheat	cytosol	68.26	80.93
HORVU3Hr1G051340.19	Barley	golgi, plasma membrane, plastid	71.96	78.81
VIT_04s0008g04220.t01	Wine grape	nucleus	67.61	77.36
Zm00001d044338_P003	Maize	mitochondrion	65.43	76.79
KRH61991	Soybean	cytosol	54.57	76.76
KRH52649	Soybean	nucleus	66.74	76.18
GSMUA_Achr11P...	Banana	cytosol	53.48	72.57
AT4G32660.1	Thale cress	nucleus	61.09	70.25
Bra011368.1-P	Field mustard	nucleus	60.43	69.85
CDX75268	Canola	nucleus	60.43	69.85
CDX68873	Canola	nucleus	60.22	69.42
GSMUA_Achr8P28600_001	Banana	cytosol	30.65	65.28
KRG94066	Soybean	cytosol	18.26	63.64
GSMUA_Achr5P29170_001	Banana	nucleus	60.22	63.53
GSMUA_Achr9P03190_001	Banana	nucleus	59.35	62.61
Zm00001d011258_P001	Maize	cytosol, nucleus, plasma membrane	53.48	62.12
GSMUA_Achr3P17160_001	Banana	cytosol	53.7	55.01
GSMUA_Achr11P...	Banana	cytosol	20.22	32.18
GSMUA_Achr4P11760_001	Banana	cytosol	22.61	28.11
GSMUA_Achr8P26710_001	Banana	cytosol	24.78	25.73
GSMUA_Achr5P11070_001	Banana	cytosol	22.83	25.61
GSMUA_Achr1P02800_001	Banana	cytosol	21.96	24.4
GSMUA_Achr8P04590_001	Banana	nucleus	25.22	24.27
GSMUA_Achr2P11360_001	Banana	cytosol	23.26	24.21
GSMUA_AchrUn_...	Banana	nucleus	23.91	15.45
GSMUA_Achr4P18950_001	Banana	nucleus	22.83	14.96
GSMUA_Achr10P...	Banana	nucleus	17.83	12.73
GSMUA_Achr8P14500_001	Banana	nucleus	25.43	12.14
GSMUA_Achr1P22430_001	Banana	mitochondrion	24.57	10.99
GSMUA_Achr3P02060_001	Banana	nucleus	23.48	10.87
GSMUA_Achr1P12470_001	Banana	nucleus	24.78	10.52
GSMUA_Achr2P21700_001	Banana	nucleus	24.57	10.17
GSMUA_Achr11P...	Banana	nucleus	23.26	9.75
GSMUA_Achr7P11320_001	Banana	nucleus	24.78	8.86
GSMUA_Achr11P...	Banana	nucleus	5.22	3.85

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.2	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0046777	EnsemblPlantsGene:GSMUA_Achr8G04030_001	EnsemblPlants:GSMUA_Achr8P04030_001	EnsemblPlants:GSMUA_Achr8T04030_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
UniProt:M0TMF6	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24058	PANTHER:PTHR24058:SF44
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000296839A	:

Description

Serine/threonine-protein kinase AFC3 [Source:GMGC_GENE;Acc:GSMUA_Achr8G04030_001]

Coordinates

chr8:-:2752314..2758789

Molecular Weight (calculated)

53455.3 Da

IEP (calculated)

8.932

GRAVY (calculated)

-0.445

Length

460 amino acids

Sequence
(BLAST)

001: MTHRSRRICW LTHPRSTGPR CLLRFGDSLR PSISRFGESI CFVAEKEEGE EIESLRVFVR YIGKVWALDS MEIVRTRKRP RLAWDVAPPE RREAVRDEAA
101: PPRRGVSPPW REDDREGHYV FDLGENLTPR YKILSKMGEG TFGRVLECWD REAHEYVAVK VVRSISKYRS AAMIEIDVLN LLAKHDKDGS RCVQIRRWFD
201: YRNHICIVFE KLGPSLYDFL KRNKYCPFPV ELVREFGRQL LESVAYMHDL RLIHTDLKPE NILLVSSEYV KVPSNKKNAQ DEMYFRCLPK SSSIKLIDFG
301: SAAFENQDHS SIVSTRHYRA PEIILGLGWN YPCDVWSVGC ILVELCSGEA LFQTHENLEH LAMMERVLGP LPERMIRKAS SSASKYFRRG SRLNWPEGAV
401: SRESIRAVRK LDRLKDMISS HVDYSRASLN DLLYGLLKFE PSERLTAREA LNHPFFENPT

Best Arabidopsis Sequence Match ( AT4G32660.1 )
(BLAST)

001: MIANGFESMD KERVRKRPRM TWDEAPAEPE AKRAVIKGHG SDGRILSPPL RDDDRDGHYV FSLRDNLTPR YKILSKMGEG TFGRVLECWD RDTKEYVAIK
101: IIRSIKKYRD AAMIEIDVLQ KLVKSDKGRT RCVQMKNWFD YRNHICIVFE KLGPSLFDFL KRNKYSAFPL ALVRDFGCQL LESVAYMHEL QLVHTDLKPE
201: NILLVSSENV KLPDNKRSAA NETHFRCLPK SSAIKLIDFG STVCDNRIHH SIVQTRHYRS PEVILGLGWS YQCDLWSIGC ILFELCTGEA LFQTHDNLEH
301: LAMMERALGP LPEHMTRKAS RGAEKYFRRG CRLNWPEGAN SRESIRAVKR LDRLKDMVSK HVDNTRSRFA DLLYGLLAYD PSERLTANEA LDHPFFKSSS

Arabidopsis Description

AFC3At4g32660 [Source:UniProtKB/TrEMBL;Acc:A1L4Y9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.