Factsheet for GSMUA_Achr1P12470_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
cytosol 1
nucleus 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os12t0640800-01	Rice	mitochondrion	18.54	88.55
GSMUA_Achr1P22430_001	Banana	mitochondrion	56.46	59.53
TraesCS5B01G001400.1	Wheat	nucleus	46.13	52.36
TraesCS5A01G000100.1	Wheat	nucleus	45.94	52.31
TraesCS4D01G044600.1	Wheat	nucleus	30.63	52.2
KXG24155	Sorghum	nucleus	46.03	52.2
TraesCS4D01G044900.2	Wheat	nucleus	30.17	52.15
TraesCS4B01G044900.1	Wheat	nucleus	30.35	51.97
TraesCS5D01G000600.1	Wheat	nucleus	45.48	51.95
AT3G53640.1	Thale cress	cytosol	30.72	51.87
TraesCS4A01G269100.1	Wheat	nucleus	29.7	51.11
Zm00001d031231_P057	Maize	nucleus	44.19	49.48
HORVU5Hr1G000200.27	Barley	cytosol, nucleus	42.44	48.37
OQU80322	Sorghum	nucleus	27.12	47.88
Zm00001d041183_P004	Maize	nucleus	45.66	47.37
PGSC0003DMT400053226	Potato	mitochondrion	36.25	47.01
Solyc05g009540.2.1	Tomato	nucleus	43.36	46.77
VIT_01s0011g03350.t01	Wine grape	nucleus	46.49	46.24
KRG90793	Soybean	nucleus	41.7	45.7
KRH35970	Soybean	nucleus	41.79	45.44
AT1G13350.3	Thale cress	nucleus	34.5	44.84
AT3G25840.1	Thale cress	nucleus	38.38	44.49
PGSC0003DMT400033770	Potato	mitochondrion	42.44	44.36
HORVU4Hr1G007330.12	Barley	nucleus, plastid	27.21	43.26
CDY13591	Canola	nucleus	35.33	43.23
Bra025165.1-P	Field mustard	nucleus	35.89	43.17
Bra017346.1-P	Field mustard	nucleus	35.42	43.15
CDX83561	Canola	nucleus	35.42	42.57
HORVU5Hr1G000140.1	Barley	mitochondrion	19.74	37.68
Os03t0710100-01	Rice	nucleus	27.49	37.53
KRH75392	Soybean	nucleus	27.95	35.31
GSMUA_Achr11P...	Banana	cytosol	8.39	31.49
GSMUA_Achr4P11760_001	Banana	cytosol	10.24	30.0
CDY04183	Canola	cytosol, nucleus, plasma membrane	36.16	29.65
GSMUA_Achr8P28600_001	Banana	cytosol	5.81	29.17
GSMUA_Achr11P...	Banana	cytosol	9.04	28.91
GSMUA_Achr5P29170_001	Banana	nucleus	10.98	27.29
CDY39184	Canola	nucleus	34.41	27.29
GSMUA_Achr8P26710_001	Banana	cytosol	10.98	26.86
GSMUA_Achr5P11070_001	Banana	cytosol	10.15	26.83
GSMUA_Achr9P03190_001	Banana	nucleus	10.7	26.61
GSMUA_Achr1P02800_001	Banana	cytosol	10.15	26.57
GSMUA_Achr2P11360_001	Banana	cytosol	10.42	25.57
GSMUA_Achr3P17160_001	Banana	cytosol	10.33	24.94
GSMUA_Achr8P04590_001	Banana	nucleus	10.98	24.9
GSMUA_Achr8P04030_001	Banana	mitochondrion	10.52	24.78
GSMUA_Achr4P18950_001	Banana	nucleus	12.36	19.09
GSMUA_Achr10P...	Banana	nucleus	10.33	17.39
GSMUA_AchrUn_...	Banana	nucleus	11.35	17.28
GSMUA_Achr3P02060_001	Banana	nucleus	13.19	14.39
GSMUA_Achr2P21700_001	Banana	nucleus	14.39	14.04
GSMUA_Achr11P...	Banana	nucleus	13.47	13.31
GSMUA_Achr8P14500_001	Banana	nucleus	11.35	12.76
GSMUA_Achr7P11320_001	Banana	nucleus	14.02	11.82
GSMUA_Achr11P...	Banana	nucleus	2.86	4.98

Protein Annotations

Gene3D:1.10.510.10	MapMan:16.4.6.8	MapMan:18.4.3.3	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr1G12470_001	EnsemblPlants:GSMUA_Achr1P12470_001	EnsemblPlants:GSMUA_Achr1T12470_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0RZA5
PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF317	InterPro:Prot_kinase_dom
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00029578B2	SEG:seg	:

Description

serine/threonine-protein kinase PRP4, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G12470_001]

Coordinates

chr1:+:9547472..9553915

Molecular Weight (calculated)

125028.0 Da

IEP (calculated)

7.737

GRAVY (calculated)

-1.189

Length

1084 amino acids

Sequence
(BLAST)

0001: MSRKKQPKLF WYLRRRPNPN HPITTHPSPP NRTIVMASEE SPSPTSSGKH CRSADDHEAE TSSKRRKHRH RHHHRHHSRR GRESDDGAEE AARLAEAVTA
0101: SCPVPKPADE EREEGEILED DEEMANLDHT KVDGFVTDGV SDSGSGEIKP DGVDVYSNLI VPGVKDSSGK NVLVLSNKQN TLKDEKMLDL AWSCENSSLN
0201: DTAWMEVDTS DGENCVWKAE SITKSLELND NKQMQTDRND SESQVRSRSP VSKESSHAAK DRMSYDHVKK TSDSDSDKVD SKQYMESKDA NRRATDRNRS
0301: VSPKSSQERY KNTRRSPASI RYHVEDKYRD KSRPIDHRKR RSYEKVSEHS DMGDDQVGLQ ESKRDYSNRQ HKLDRCAARN RVSDIEIPNE RESSGKRRHD
0401: DRHRSQERDK ERERSSSSVR DTDKTQLDKR SHREKERSSN HSRYDRQADK HEIWDRESGK EKYSFSTRDR VRDKPRDLNR EKYVERERLR ESKHEKKRDD
0501: SDRDKNKSRD REIIAHKGKE HGDQMETDRI SSRYRHRESR HPKYDEVEHH KDKSRSEAGF KKDNSDKDTQ KSIREEEEEE DYQDKIEQQL AKQDEDDVDM
0601: IKNESRKRRQ AILEKYQQRQ LQQVESSSDG NVNESEKATS DKENLQGLLG MSVDNKVNNE ELENRDDSRN VFDVGPSFSV GKSPVQNGDL ADKKMNNVGG
0701: LGEGTPKSEI SADMFTDDMF GESPAGVCVK GKCEGPQIDR SYLHDNWDDA EGYYSYRFGE VLDGRYEVVA AHGKGVFSTV VRARDLKAGK GDPEEVAIKM
0801: IRNNDTMYKA GQDELVILKK LVGADPEDKR HCVRFLSSFK YRNHLCLVFE SLHMNLREVL KKFGRNIGLK LTAVRAYAKQ LFIALKHLRN CGVLHCDIKP
0901: DNMLVNEPKN VLKLCDFGNA MFAGKNEITP YLVSRFYRAP EIILGLPYDH PMDVWSVGCC LYELYTAKVL FPGPSNNDML RLHMELKGPF PKKMLRKGAF
1001: TDHHFDQDLN FHATEEDPVT KKPVKRLLIN IKPKDIGALM SGFSEEDPKM LSNFKDLLDR IFVLDPEKRM TVSQALSHPF ITGK

Best Arabidopsis Sequence Match ( AT3G25840.2 )
(BLAST)

001: MDREGSIRDR DSEGSKRRDK DSDRRRERER EKRREIESDR ERRKEKERER SIDRDRRKER EGDYLRDRAN ERGRSRDRTR YNSRERKREK EREGEKDWER
101: GRETQKDREK YISSDVDYGE MRHKQSRNTR YDAVDDLEMR KPNSLKAHNS KGDKLEETWA NDERSRNEDG QDDNDEGLTW KSPEEEEEEL LNRIKEESRK
201: RMEAILEKHK RKPEQQNELL TQDNGKDIVP ETGAPVSTSP AVVIAANVGQ AKTNLDFDTV AAKAPLIAGG PPTMSGISDS EKNQAQAGLG EGSPKSERSA
301: DMFHDDIFGE SPAGIRKVGG KGDGVPMVRS GLHDNWDDAE GYYSYQFGEL LDGRYEVIAT HGKGVFSTVV RAKDLKAGPA EPEEVAIKII RNNETMHKAG
401: KIEVQILKKL AGADREDRRH CVRFLSSFKY RNHLCLVFES LHLNLREVLK KFGRNIGLQL SAVRAYSKQL FIALKHLKNC GVLHCDIKPD NMLVNEGKNV
501: LKLCDFGNAM FAGKNEVTPY LVSRFYRSPE IILGLTYDHP LDIWSVGCCL YELYSGKVLF PGATNNDMLR LHMELKGPFP KKMLRKGAFI DQHFDHDLNF
601: YATEEDTVSG KLIKRMIVNV KPKDFGSIIK GYPGEDPKIL AHFRDLLDKM FILDPERRLT VSQALAHPFI TGK

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8RWN3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.