Factsheet for PGSC0003DMT400053226

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

mitochondrion: 24351685

msms PMID: 24351685 doi

F Salvato, JF Havelund, M Chen, RS Rao, A Rogowska-Wrzesinska, ON Jensen, DR Gang, JJ Thelen, IM Møller

Department of Biochemistry and Interdisciplinary Plant Group, University of Missouri, Columbia, Missouri 65211.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os12t0640800-01	Rice	mitochondrion	21.65	79.74
Solyc05g009540.2.1	Tomato	nucleus	57.3	47.66
TraesCS4B01G044900.1	Wheat	nucleus	36.0	47.55
TraesCS4D01G044900.2	Wheat	nucleus	35.65	47.53
AT3G53640.1	Thale cress	cytosol	36.48	47.51
TraesCS4A01G269100.1	Wheat	nucleus	35.77	47.46
TraesCS4D01G044600.1	Wheat	nucleus	35.65	46.86
PGSC0003DMT400033770	Potato	mitochondrion	56.7	45.71
KRG90793	Soybean	nucleus	49.52	41.86
KXG24155	Sorghum	nucleus	47.85	41.84
Bra017346.1-P	Field mustard	nucleus	44.14	41.46
KRH35970	Soybean	nucleus	49.28	41.32
OQU80322	Sorghum	nucleus	29.9	40.72
TraesCS5A01G000100.1	Wheat	nucleus	46.29	40.65
TraesCS5D01G000600.1	Wheat	nucleus	46.05	40.57
TraesCS5B01G001400.1	Wheat	nucleus	46.29	40.52
AT3G25840.1	Thale cress	nucleus	45.22	40.43
CDX83561	Canola	nucleus	43.42	40.24
CDY13591	Canola	nucleus	42.46	40.07
Bra025165.1-P	Field mustard	nucleus	43.18	40.07
HORVU5Hr1G000200.27	Barley	cytosol, nucleus	45.57	40.06
Zm00001d031231_P057	Maize	nucleus	46.17	39.88
VIT_01s0011g03350.t01	Wine grape	nucleus	51.55	39.54
HORVU4Hr1G007330.12	Barley	nucleus, plastid	32.18	39.44
AT1G13350.3	Thale cress	nucleus	38.52	38.61
GSMUA_Achr1P22430_001	Banana	mitochondrion	46.53	37.84
Zm00001d041183_P004	Maize	nucleus	46.77	37.42
GSMUA_Achr1P12470_001	Banana	nucleus	47.01	36.25
PGSC0003DMT400079686	Potato	cytosol	11.12	32.29
KRH75392	Soybean	nucleus	30.98	30.19
PGSC0003DMT400069308	Potato	golgi, vacuole	12.68	29.12
HORVU5Hr1G000140.1	Barley	mitochondrion	19.38	28.52
PGSC0003DMT400030615	Potato	nucleus	14.47	28.21
CDY04183	Canola	cytosol, nucleus, plasma membrane	43.42	27.46
Os03t0710100-01	Rice	nucleus	26.08	27.46
PGSC0003DMT400061423	Potato	nucleus	13.88	26.91
CDY39184	Canola	nucleus	43.06	26.34
PGSC0003DMT400046853	Potato	cytosol	13.4	25.93
PGSC0003DMT400003820	Potato	cytosol	12.56	23.54
PGSC0003DMT400045066	Potato	cytosol	12.44	23.21
PGSC0003DMT400021639	Potato	nucleus	13.16	20.95
PGSC0003DMT400006951	Potato	mitochondrion, nucleus	13.28	20.29
PGSC0003DMT400018439	Potato	nucleus	12.8	19.6
PGSC0003DMT400043636	Potato	cytosol	13.64	17.43
PGSC0003DMT400079685	Potato	nucleus	4.78	4.58
PGSC0003DMT400069307	Potato	nucleus	4.43	4.22
PGSC0003DMT400068117	Potato	nucleus	0.12	0.24

Protein Annotations

Gene3D:1.10.510.10	MapMan:16.4.6.8	MapMan:18.4.3.3	Gene3D:3.30.200.20	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1BUM6	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400020660
PGSC:PGSC0003DMG400020660	EnsemblPlants:PGSC0003DMT400053226	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF317
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000294D69F	SEG:seg

Description

Protein kinase domain containing protein [Source:PGSC_GENE;Acc:PGSC0003DMG400020660]

Coordinates

chr6:+:2514794..2521127

Molecular Weight (calculated)

97339.5 Da

IEP (calculated)

7.291

GRAVY (calculated)

-1.066

Length

836 amino acids

Sequence
(BLAST)

001: MARNCRTSDG EPQTPEEGEI IDDVPVNASY VIELDSKPRK VQVSRKHKSS KDYYASDLQV ERKPGKRHRV SSSQNEVNES HRGRWQSESI LEEYAYEMER
101: EVYTSNLDDD ITGHFRDYHH GYRESSKEHK SSYSRRMREK DRERELERER ERERGREKKR EKAQYEEQKY EREREERGRR KRDRESRGPS REDRDRYNDR
201: SSRQWKFDDL DDDGNAYHRR YETDNERDRA ANLLKFGKQK TQETESEKPK RDEVEQKDYQ EKIAFQLAQQ EEEEEDELDR IKEESRRRRQ AILEKYKNQP
301: SQKSGDNAEV HVNRSTEKHA AGDSAVPEPI DGPTNGANVH GDEPTFYSGK SPLPGGHNAD EKASGAGGLG QGTPEFSTEE LVKTLEKKIE RLQQQPQFST
401: EELVKELSKQ KENFKQHQQE HEDGVKQQFP TEELVKELAK QLEYLQQHQP EYNDQVKQQS ERSADMFCDD IFGESPAAIP KMGKGDGMPT ERNCLHDNWN
501: DLEGYYRYRF GEILDGRYEI LAAHGKGVFS TVVRAKDLKA RPGDPTEVAI KIIRNNDTMY KAGMEELVIL KKLVAADPKD KRRCVHLISS FKYRNHLCLV
601: FESLWMNLRG LQKKFGRNIG LSLDVVRLYA KQLFSALKHL KSCGVLHCDI KPDNILVNEA KDKLKLCVFG NAMFAGKNEI TPYLVSRFYR APEIILGLSY
701: DHPMDIWSVG CCLFELYAGK VLFPGRSNND MLRLHMELKG PFPKKMLRKG AFTYQHFDQD LNFLATEEDP VTKKAIRKLI VNIKPKDISS VISGDPGEEL
801: KMLAHFKDLM ERIFVLDPLR RITVSQALEH PFITKK

Best Arabidopsis Sequence Match ( AT3G25840.1 )
(BLAST)

001: MANDKQIESH HRKHHRSSSS SDDTEKASKR HKHRHHKHHH HRHRHHRDKK RENEIPSAGD ETEILDVTPA APIVVSNGCE EEDVEEGEIL EEDGIGDVLM
101: KTADSDGESG EIKFEDNNLP PLGEKGRQGE EKSSNGVLTR ESEREDKRWD KEAGGPSERV SKLSYDNGRS SFSPSNSRQS NEGRARSRSK SHDRERETSR
201: SRFAEDEFSD RGRHHDSSRD YHHDRVDSVR TEERYHRRGR YEENDRQYSR EVLERDRSKE RDMDREGSIR DRDSEGSKRR DKDSDRRRER EREKRREIES
301: DRERRKEKER ERSIDRDRRK EREGDYLRDR ANERGRSRDR TRYNSRERKR EKEREGEKDW ERGRETQKDR EKYISSDVDY GEMRHKQSRN TRYDAVDDLE
401: MRKPNSLKAH NSKGDKLEET WANDERSRNE DGQDDNDEGL TWKSPEEEEE ELLNRIKEES RKRMEAILEK HKRKPEQQNE LLTQDNGKDI VPETGAPVST
501: SPAVVIAANV GQAKTNLDFD TVAAKAPLIA GGPPTMSGIS DSEKNQAQAG LGEGSPKSER SADMFHDDIF GESPAGIRKV GGKGDGVPMV RSGLHDNWDD
601: AEGYYSYQFG ELLDGRYEVI ATHGKGVFST VVRAKDLKAG PAEPEEVAIK IIRNNETMHK AGKIEVQILK KLAGADREDR RHCVRFLSSF KYRNHLCLVF
701: ESLHLNLREV LKKFGRNIGL QLSAVRAYSK QLFIALKHLK NCGVLHCDIK PDNMLVNEGK NVLKLCDFGN AMFAGKNEVT PYLVSRFYRS PEIILGLTYD
801: HPLDIWSVGC CLYELYSGKV LFPGATNNDM LRLHMELKGP FPKKMLRKGA FIDQHFDHDL NFYATEEDTV SGKLIKRMIV NVKPKDFGSI IKGYPGEDPK
901: ILAHFRDLLD KMFILDPERR LTVSQALAHP FITGK

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8RWN3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.