Factsheet for TraesCS4D01G044600.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
plastid 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G044900.1	Wheat	nucleus	96.07	96.52
TraesCS4D01G044900.2	Wheat	nucleus	91.35	92.66
TraesCS4A01G269100.1	Wheat	nucleus	90.41	91.27
HORVU4Hr1G007330.12	Barley	nucleus, plastid	82.7	77.13
AT3G53640.1	Thale cress	cytosol	45.75	45.33
OQU80322	Sorghum	nucleus	40.25	41.69
TraesCS5D01G000600.1	Wheat	nucleus	55.82	37.41
AT1G13350.3	Thale cress	nucleus	47.48	36.21
PGSC0003DMT400053226	Potato	mitochondrion	46.86	35.65
Bra025165.1-P	Field mustard	nucleus	48.58	34.3
CDY13591	Canola	nucleus	47.64	34.2
CDX83561	Canola	nucleus	48.11	33.92
Bra017346.1-P	Field mustard	nucleus	47.33	33.82
AT3G25840.1	Thale cress	nucleus	49.53	33.69
Solyc05g009540.2.1	Tomato	nucleus	52.04	32.94
KRG90793	Soybean	nucleus	50.94	32.76
KRH35970	Soybean	nucleus	51.26	32.7
Os03t0710100-01	Rice	nucleus	40.09	32.12
PGSC0003DMT400033770	Potato	mitochondrion	51.89	31.82
GSMUA_Achr1P22430_001	Banana	mitochondrion	50.31	31.13
VIT_01s0011g03350.t01	Wine grape	nucleus	52.52	30.64
GSMUA_Achr1P12470_001	Banana	nucleus	52.2	30.63
TraesCS3D01G214800.2	Wheat	cytosol	18.08	29.64
TraesCS6D01G193300.1	Wheat	cytosol	18.24	26.98
TraesCS5D01G378900.2	Wheat	cytosol, mitochondrion	17.61	26.42
TraesCS6D01G223400.1	Wheat	nucleus	17.92	26.27
CDY04183	Canola	cytosol, nucleus, plasma membrane	49.06	23.6
TraesCS5D01G359900.2	Wheat	cytosol	14.94	22.46
KRH75392	Soybean	nucleus	30.03	22.26
CDY39184	Canola	nucleus	47.01	21.87
TraesCS1D01G290600.1	Wheat	cytosol	19.5	17.51
TraesCS5D01G397000.1	Wheat	nucleus	15.25	17.26
TraesCS3D01G345700.2	Wheat	nucleus	19.34	16.99
TraesCS2D01G246700.1	Wheat	nucleus	14.78	13.54
TraesCS6D01G244300.3	Wheat	nucleus, plastid	18.71	12.67
TraesCS2D01G433100.1	Wheat	nucleus	17.45	11.97
TraesCS4D01G052100.1	Wheat	nucleus	20.28	11.64

Protein Annotations

Gene3D:1.10.510.10	MapMan:16.4.6.8	MapMan:18.4.3.3	Gene3D:3.30.200.20	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24056	PANTHER:PTHR24056:SF317	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:TraesCS4D01G044600	EnsemblPlants:TraesCS4D01G044600.1	TIGR:cd14135	SEG:seg	:	:

Description

No Description!

Coordinates

chr4D:+:20405623..20409524

Molecular Weight (calculated)

71040.6 Da

IEP (calculated)

8.478

GRAVY (calculated)

-0.632

Length

636 amino acids

Sequence
(BLAST)

001: MGSGEGPVSP RSTSRRHRRS HGDGADEASS PKRQKRCHHR HHHRHYGHGH GDRGDQEAGS RSRMSGAKPG EGEVEDGQIV DDAAAAASRG PDADFGKAGS
101: VFGGLAPAPG CDDKFDANKK CREANHRKRS EEIKEQSCKE EDQSDFEHFA KQEEDDLKKT KEEARKRMDA ILEKHRQRQF QKEHQGPVPF HDSTEVTSLD
201: RDAATTEVKD ANSVTVIVNE KSYTLGMTPP IQPNISINLG ISGDQWTACV SGFQEGIPKG DRSSVILCDD IFGASPIRVQ KLGNLDGMHV RKNSLHDNWD
301: DEHGYYKYHL GEVLDGHYRI TAGSGKGVFS TVVQAKDLKA GKNDPEEVAI KIICNEKERY KSGKREVSVL EKLSSADRED KRHCVRFISS FMYRDHLCLV
401: LESLHMNLRE VIKKFGRDIG LKLTAVRTYS KQLFIALKHL KDCSILHCDI KPDNILVNGS RNLLKLCDFG SALPAGINVI TPVLVSRFYR APEIILGLPY
501: DHSLDMWSVG CCLYELYTGK ILFPGGTNNG MLWLHMELKG PFPKKMLRKG AFTTQHFDQD LNFHATDENL MMKKAVNKLC MNVKPKGVGA KISSFAGEDP
601: KMLSSFKDLL EKIFVLDPQK RLTVSQALSH PFITGK

Best Arabidopsis Sequence Match ( AT3G25840.1 )
(BLAST)

001: MANDKQIESH HRKHHRSSSS SDDTEKASKR HKHRHHKHHH HRHRHHRDKK RENEIPSAGD ETEILDVTPA APIVVSNGCE EEDVEEGEIL EEDGIGDVLM
101: KTADSDGESG EIKFEDNNLP PLGEKGRQGE EKSSNGVLTR ESEREDKRWD KEAGGPSERV SKLSYDNGRS SFSPSNSRQS NEGRARSRSK SHDRERETSR
201: SRFAEDEFSD RGRHHDSSRD YHHDRVDSVR TEERYHRRGR YEENDRQYSR EVLERDRSKE RDMDREGSIR DRDSEGSKRR DKDSDRRRER EREKRREIES
301: DRERRKEKER ERSIDRDRRK EREGDYLRDR ANERGRSRDR TRYNSRERKR EKEREGEKDW ERGRETQKDR EKYISSDVDY GEMRHKQSRN TRYDAVDDLE
401: MRKPNSLKAH NSKGDKLEET WANDERSRNE DGQDDNDEGL TWKSPEEEEE ELLNRIKEES RKRMEAILEK HKRKPEQQNE LLTQDNGKDI VPETGAPVST
501: SPAVVIAANV GQAKTNLDFD TVAAKAPLIA GGPPTMSGIS DSEKNQAQAG LGEGSPKSER SADMFHDDIF GESPAGIRKV GGKGDGVPMV RSGLHDNWDD
601: AEGYYSYQFG ELLDGRYEVI ATHGKGVFST VVRAKDLKAG PAEPEEVAIK IIRNNETMHK AGKIEVQILK KLAGADREDR RHCVRFLSSF KYRNHLCLVF
701: ESLHLNLREV LKKFGRNIGL QLSAVRAYSK QLFIALKHLK NCGVLHCDIK PDNMLVNEGK NVLKLCDFGN AMFAGKNEVT PYLVSRFYRS PEIILGLTYD
801: HPLDIWSVGC CLYELYSGKV LFPGATNNDM LRLHMELKGP FPKKMLRKGA FIDQHFDHDL NFYATEEDTV SGKLIKRMIV NVKPKDFGSI IKGYPGEDPK
901: ILAHFRDLLD KMFILDPERR LTVSQALAHP FITGK

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8RWN3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.