Factsheet for TraesCS3D01G214800.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G049700.1
TraesCS1A01G108000.2
TraesCS1B01G065900.2
TraesCS1B01G130200.3
TraesCS1D01G051900.1
TraesCS1D01G111000.2
TraesCS2A01G229600.2
TraesCS2B01G251300.1
TraesCS2D01G233500.1
TraesCS3A01G308000.1
TraesCS3B01G151100.1
TraesCS3D01G134500.1
TraesCS4A01G094800.1
TraesCS4B01G209700.1
TraesCS4D01G210400.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G32660.1	TraesCS2A01G229600.2	AT1G30860.1	21798944
AT4G32660.1	TraesCS2B01G251300.1	AT1G30860.1	21798944
AT4G32660.1	TraesCS2D01G233500.1	AT1G30860.1	21798944
AT4G32660.1	TraesCS4A01G094800.1	AT2G29210.1	21798944
AT4G32660.1	TraesCS4B01G209700.1	AT2G29210.1	21798944
AT4G32660.1	TraesCS4D01G210400.1	AT2G29210.1	21798944
AT4G32660.1	TraesCS1A01G049700.1	AT2G37340.1	21798944
AT4G32660.1	TraesCS1A01G108000.2	AT2G37340.1	21798944
AT4G32660.1	TraesCS1B01G065900.2	AT2G37340.1	21798944
AT4G32660.1	TraesCS1B01G130200.3	AT2G37340.1	21798944
AT4G32660.1	TraesCS1D01G051900.1	AT2G37340.1	21798944
AT4G32660.1	TraesCS1D01G111000.2	AT2G37340.1	21798944
AT4G32660.1	TraesCS3A01G308000.1	AT2G37340.1	21798944
AT4G32660.1	TraesCS3B01G151100.1	AT2G37340.1	21798944
AT4G32660.1	TraesCS3D01G134500.1	AT2G37340.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G242600.2	Wheat	cytosol	100.0	100.0
TraesCS3A01G212200.2	Wheat	cytosol	99.48	99.48
EES00987	Sorghum	mitochondrion	92.27	92.75
Os01t0590900-01	Rice	nucleus	92.27	92.27
HORVU3Hr1G051340.19	Barley	golgi, plasma membrane, plastid	98.2	90.71
Zm00001d044338_P003	Maize	mitochondrion	86.6	85.71
KRH61991	Soybean	cytosol	63.14	74.92
VIT_04s0008g04220.t01	Wine grape	nucleus	76.29	73.63
KRH52649	Soybean	nucleus	76.29	73.45
Zm00001d011258_P001	Maize	cytosol, nucleus, plasma membrane	71.91	70.45
AT4G32660.1	Thale cress	nucleus	70.62	68.5
GSMUA_Achr8P04030_001	Banana	mitochondrion	81.19	68.48
CDX68873	Canola	nucleus	70.1	68.17
CDX75268	Canola	nucleus	69.85	68.09
Bra011368.1-P	Field mustard	nucleus	69.85	68.09
KRG94066	Soybean	cytosol	21.65	63.64
TraesCS5D01G378900.2	Wheat	cytosol, mitochondrion	67.01	61.32
TraesCS6D01G223400.1	Wheat	nucleus	66.75	59.68
TraesCS6D01G193300.1	Wheat	cytosol	64.18	57.91
TraesCS5D01G359900.2	Wheat	cytosol	29.9	27.42
TraesCS5D01G397000.1	Wheat	nucleus	31.7	21.89
TraesCS4D01G044600.1	Wheat	nucleus	29.64	18.08
TraesCS4D01G044900.2	Wheat	nucleus	28.87	17.86
TraesCS2D01G246700.1	Wheat	nucleus	28.87	16.14
TraesCS1D01G290600.1	Wheat	cytosol	27.32	14.97
TraesCS3D01G345700.2	Wheat	nucleus	27.32	14.64
TraesCS5D01G000600.1	Wheat	nucleus	30.67	12.54
TraesCS2D01G433100.1	Wheat	nucleus	28.35	11.87
TraesCS6D01G244300.3	Wheat	nucleus, plastid	28.61	11.82
TraesCS4D01G052100.1	Wheat	nucleus	27.32	9.57

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.2	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0046777	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24058	PANTHER:PTHR24058:SF52	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:TraesCS3D01G214800	EnsemblPlants:TraesCS3D01G214800.2	TIGR:cd14134	:	:	:

Description

No Description!

Coordinates

chr3D:+:290136238..290141156

Molecular Weight (calculated)

44997.0 Da

IEP (calculated)

8.796

GRAVY (calculated)

-0.496

Length

388 amino acids

Sequence
(BLAST)

001: MESSRSRKRT RQELDSAGDP PPEREVVARG GASPPWRDDD RDGHYVFDLG ENLTRRYKIL SKMGEGTFGR VLECWDRETR EYVAIKVVRS IRKYRDAAMI
101: EIDVLNRLAE NERYRSLCVQ IQRWFDYRNH ICIVFEKLGP SLYDFLKRNR YQPFPVELVR EFGRQLLESV AYMHELRLIH TDLKPENILL VSSEYIKVPS
201: SKKNSQDEIH FKCLPKSSAI KLIDFGSTAF DNQEHTSIVS TRHYRAPEII LGLGWSLPCD IWSVGCILVE LCSGEALFQT HENLEHLAMM ERVLGPVPEH
301: MIRKASSSAQ KYFRRGTRLN WPEGAVTRES IRAVRKLHRL KDLVARNADH SKASLADLLY GLLRFEPSER LTAQEALDHP FFRIPGPT

Best Arabidopsis Sequence Match ( AT4G32660.1 )
(BLAST)

001: MIANGFESMD KERVRKRPRM TWDEAPAEPE AKRAVIKGHG SDGRILSPPL RDDDRDGHYV FSLRDNLTPR YKILSKMGEG TFGRVLECWD RDTKEYVAIK
101: IIRSIKKYRD AAMIEIDVLQ KLVKSDKGRT RCVQMKNWFD YRNHICIVFE KLGPSLFDFL KRNKYSAFPL ALVRDFGCQL LESVAYMHEL QLVHTDLKPE
201: NILLVSSENV KLPDNKRSAA NETHFRCLPK SSAIKLIDFG STVCDNRIHH SIVQTRHYRS PEVILGLGWS YQCDLWSIGC ILFELCTGEA LFQTHDNLEH
301: LAMMERALGP LPEHMTRKAS RGAEKYFRRG CRLNWPEGAN SRESIRAVKR LDRLKDMVSK HVDNTRSRFA DLLYGLLAYD PSERLTANEA LDHPFFKSSS

Arabidopsis Description

AFC3At4g32660 [Source:UniProtKB/TrEMBL;Acc:A1L4Y9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.