CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG95876
KRG95883
KRH12155
KRH24737
KRH29744
KRH37161
KRH42195
KRH58317
KRH67593
KRH67596

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G32660.1	KRH12155	AT1G30860.1	21798944
AT4G32660.1	KRH37161	AT1G30860.1	21798944
AT4G32660.1	KRH24737	AT2G29210.1	21798944
AT4G32660.1	KRH29744	AT2G29210.1	21798944
AT4G32660.1	KRG95876	AT2G37340.1	21798944
AT4G32660.1	KRG95883	AT2G37340.1	21798944
AT4G32660.1	KRH42195	AT2G37340.1	21798944
AT4G32660.1	KRH58317	AT2G37340.1	21798944
AT4G32660.1	KRH67593	AT2G37340.1	21798944
AT4G32660.1	KRH67596	AT2G37340.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH52649	Soybean	nucleus	93.58	75.93
VIT_04s0008g04220.t01	Wine grape	nucleus	80.43	65.42
TraesCS3D01G214800.2	Wheat	cytosol	74.92	63.14
TraesCS3B01G242600.2	Wheat	cytosol	74.92	63.14
Os01t0590900-01	Rice	nucleus	74.92	63.14
TraesCS3A01G212200.2	Wheat	cytosol	74.62	62.89
EES00987	Sorghum	mitochondrion	74.01	62.69
HORVU3Hr1G051340.19	Barley	golgi, plasma membrane, plastid	74.92	58.33
AT4G32660.1	Thale cress	nucleus	71.25	58.25
CDX68873	Canola	nucleus	69.42	56.89
Zm00001d044338_P003	Maize	mitochondrion	67.89	56.63
Bra011368.1-P	Field mustard	nucleus	68.81	56.53
CDX75268	Canola	nucleus	68.81	56.53
GSMUA_Achr8P04030_001	Banana	mitochondrion	76.76	54.57
KRH63654	Soybean	nucleus	66.06	50.82
KRH54290	Soybean	cytosol, nucleus	65.44	50.35
KRH57157	Soybean	cytosol	66.06	50.23
Zm00001d011258_P001	Maize	cytosol, nucleus, plasma membrane	60.24	49.75
KRH67569	Soybean	nucleus	66.06	48.65
KRH03872	Soybean	nucleus	65.75	45.55
KRG95853	Soybean	cytosol	37.92	43.21
KRG94066	Soybean	cytosol	13.46	33.33
KRH63030	Soybean	cytosol, nucleus	23.55	29.06
KRH07798	Soybean	cytosol	29.97	22.02
KRH39422	Soybean	cytosol	29.66	21.8
KRH28929	Soybean	nucleus	29.36	21.57
KRH76530	Soybean	nucleus	29.05	21.35
KRH26554	Soybean	nucleus	32.42	19.45
KRH22757	Soybean	nucleus	32.11	19.23
KRH32624	Soybean	nucleus	32.11	19.2
KRH20002	Soybean	nucleus	27.22	17.15
KRH25147	Soybean	mitochondrion	28.75	17.0
KRH14940	Soybean	nucleus	27.83	12.82
KRH73194	Soybean	nucleus	28.44	12.79
KRH07651	Soybean	nucleus	29.66	10.2
KRH45354	Soybean	nucleus	29.66	10.14
KRH35970	Soybean	nucleus	30.28	9.93
KRG90793	Soybean	nucleus	29.97	9.91
KRH60590	Soybean	nucleus	26.91	8.01
KRH41895	Soybean	nucleus	27.22	7.96
KRH38978	Soybean	nucleus	27.52	7.69
KRH09504	Soybean	nucleus	27.52	7.63
KRH75392	Soybean	nucleus	16.21	6.18

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.2	Gene3D:3.30.200.20	UniProt:A0A0R0K5L1	EMBL:ACUP02002206	EnsemblPlantsGene:GLYMA_04G0789001
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	EnsemblPlants:KRH61991	ProteinID:KRH61991	ProteinID:KRH61991.1
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24058	PANTHER:PTHR24058:SF44
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0006ED814F	:

Description

hypothetical protein

Coordinates

chr4:-:6617328..6620227

Molecular Weight (calculated)

38074.8 Da

IEP (calculated)

8.544

GRAVY (calculated)

-0.417

Length

327 amino acids

Sequence
(BLAST)

001: MERERTRKRP RLAWDVAPPS VSEAQRALPV PGDEEFERKH VSPPKRDDDR EGHYVFNLGE NLTPRYKILS KMGEGTFGRV LECWDRQTRE YVAIKVVRSI
101: RKYRDAAMLE IDVLQQLAKN NRGSSRCVQI RNWFDYRSHV CIVFERLGPS LFDFLKRNKY CPFPVDLVRE FGRQLLESVA YMHELRLIHT DLKPENILLV
201: SSEYVKLPSY KRVSSDETQF RCLPKSSAIK LIDFGSTTYD NQNHSSIVST RHYRAPEIIL GLGWSYPCDL WSVGCILIEL CSGEALFQTH ENLEHLAMME
301: RVLGSIPELM IRRSNFVLDT TRVAAFQ

Best Arabidopsis Sequence Match ( AT4G32660.2 )
(BLAST)

001: MIANGFESMD KERVRKRPRM TWDEAPAEPE AKRAVIKGHG SDGRILSPPL RDDDRDGHYV FSLRDNLTPR YKILSKMGEG TFGRVLECWD RDTKEYVAIK
101: IIRSIKKYRD AAMIEIDVLQ KLVKSDKGRT RCVQMKNWFD YRNHICIVFE KLGPSLFDFL KRNKYSAFPL ALVRDFGCQL LESVAYMHEL QLVHTDLKPE
201: NILLVSSENV KLPDNKRSAA NETHFRCLPK SSAIKLIDFG STVCDNRIHH SIVQTRHYRS PEVILGLGWS YQCDLWSIGC ILFELCTGEA LFQTHDNLEH
301: LAMMERALGP LPEHMTRKAS RGAEKYFRRG CRLNWPEGAN SRESIRAVKR LDRLKV

Arabidopsis Description

AFC3At4g32660 [Source:UniProtKB/TrEMBL;Acc:A1L4Y9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.