Factsheet for Zm00001d044338_P003

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 1
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d006417_P002
Zm00001d011004_P008
Zm00001d011005_P005
Zm00001d021532_P001
Zm00001d028579_P027
Zm00001d035551_P007
Zm00001d035552_P001
Zm00001d037543_P001
Zm00001d047831_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G32660.1	Zm00001d006417_P002	AT1G30860.1	21798944
AT4G32660.1	Zm00001d021532_P001	AT1G30860.1	21798944
AT4G32660.1	Zm00001d028579_P027	AT2G29210.1	21798944
AT4G32660.1	Zm00001d047831_P001	AT2G29210.1	21798944
AT4G32660.1	Zm00001d011004_P008	AT2G37340.1	21798944
AT4G32660.1	Zm00001d011005_P005	AT2G37340.1	21798944
AT4G32660.1	Zm00001d035551_P007	AT2G37340.1	21798944
AT4G32660.1	Zm00001d035552_P001	AT2G37340.1	21798944
AT4G32660.1	Zm00001d037543_P001	AT2G37340.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES00987	Sorghum	mitochondrion	88.78	90.16
TraesCS3D01G214800.2	Wheat	cytosol	85.71	86.6
TraesCS3B01G242600.2	Wheat	cytosol	85.71	86.6
TraesCS3A01G212200.2	Wheat	cytosol	85.71	86.6
Os01t0590900-01	Rice	nucleus	84.69	85.57
HORVU3Hr1G051340.19	Barley	golgi, plasma membrane, plastid	84.95	79.29
Zm00001d011258_P001	Maize	cytosol, nucleus, plasma membrane	75.51	74.75
VIT_04s0008g04220.t01	Wine grape	nucleus	70.92	69.15
KRH61991	Soybean	cytosol	56.63	67.89
KRH52649	Soybean	nucleus	69.64	67.74
GSMUA_Achr8P04030_001	Banana	mitochondrion	76.79	65.43
KRG94066	Soybean	cytosol	21.43	63.64
AT4G32660.1	Thale cress	nucleus	64.8	63.5
CDX75268	Canola	nucleus	64.03	63.07
Bra011368.1-P	Field mustard	nucleus	64.03	63.07
CDX68873	Canola	nucleus	64.03	62.91
Zm00001d042938_P003	Maize	cytosol	63.01	55.13
Zm00001d005361_P007	Maize	cytosol, plastid	57.91	53.79
Zm00001d017096_P005	Maize	cytosol	59.44	52.36
Zm00001d050970_P003	Maize	cytosol	58.93	51.79
Zm00001d006308_P001	Maize	plastid	26.02	24.06
Zm00001d013273_P003	Maize	nucleus	27.55	19.15
Zm00001d034010_P002	Maize	mitochondrion, nucleus	28.32	17.54
Zm00001d010578_P003	Maize	cytosol, plastid	25.0	13.86
Zm00001d021342_P017	Maize	cytosol	25.77	13.84
Zm00001d042979_P007	Maize	nucleus	25.51	13.48
Zm00001d006355_P011	Maize	cytosol	26.53	13.18
Zm00001d012452_P004	Maize	nucleus	23.47	11.81
Zm00001d031231_P057	Maize	nucleus	27.04	10.95
Zm00001d017754_P031	Maize	nucleus, plastid	24.74	10.31
Zm00001d002418_P030	Maize	nucleus, plastid	23.98	10.25
Zm00001d041183_P004	Maize	nucleus	27.04	10.14
Zm00001d026246_P001	Maize	cytosol	22.19	9.48
Zm00001d013405_P004	Maize	nucleus	25.51	8.9
Zm00001d033798_P030	Maize	mitochondrion	25.26	8.55

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100194024	MapMan:18.4.3.2	Gene3D:3.30.200.20	UniProt:A0A1D6NL08	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	ProteinID:ONM40929.1	PFAM:PF00069
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24058	PANTHER:PTHR24058:SF44	InterPro:Prot_kinase_dom	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000843EB17	EnsemblPlantsGene:Zm00001d044338	EnsemblPlants:Zm00001d044338_P003	EnsemblPlants:Zm00001d044338_T003

Description

Serine/threonine-protein kinase AFC3

Coordinates

chr3:+:225447318..225452147

Molecular Weight (calculated)

45309.0 Da

IEP (calculated)

8.444

GRAVY (calculated)

-0.512

Length

392 amino acids

Sequence
(BLAST)

001: MESSQSRKRT RQAYDCAAAL PPEREVVARG GASPPWREDD RDGHYVFDLG ENLTRRYKIL SKMGEGSGFL QSVVSSSGGY PRYYSNEEGY ELGFRSIRKY
101: RDAAMIEIDV LNRLAENEKY RSLCVQIQRW FDYRNHICIV FEKLGPSLYD FLKRNRYRPF PVELVREFGR QLLESVAYMH DLRLIHTDLK PENILLVSSE
201: YIKVPSTKKN SQDEMHFKCL PQSSAIKLID FGSTAFDNQD HNSIVSTRHY RAPEIILGLG WSFPCDIWSV GCILVELCSG EALFQTHENL EHLAMMERVL
301: GPLPEHMIRK SSSSAQKYFR RATRLNWPEG AVSRESIRAV KKLDRLKDLV SRNAGHSKAE LADLLYSILR FEPSERLTAQ EALEHPFFRN PT

Best Arabidopsis Sequence Match ( AT4G32660.1 )
(BLAST)

001: MIANGFESMD KERVRKRPRM TWDEAPAEPE AKRAVIKGHG SDGRILSPPL RDDDRDGHYV FSLRDNLTPR YKILSKMGEG TFGRVLECWD RDTKEYVAIK
101: IIRSIKKYRD AAMIEIDVLQ KLVKSDKGRT RCVQMKNWFD YRNHICIVFE KLGPSLFDFL KRNKYSAFPL ALVRDFGCQL LESVAYMHEL QLVHTDLKPE
201: NILLVSSENV KLPDNKRSAA NETHFRCLPK SSAIKLIDFG STVCDNRIHH SIVQTRHYRS PEVILGLGWS YQCDLWSIGC ILFELCTGEA LFQTHDNLEH
301: LAMMERALGP LPEHMTRKAS RGAEKYFRRG CRLNWPEGAN SRESIRAVKR LDRLKDMVSK HVDNTRSRFA DLLYGLLAYD PSERLTANEA LDHPFFKSSS

Arabidopsis Description

AFC3At4g32660 [Source:UniProtKB/TrEMBL;Acc:A1L4Y9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.