Factsheet for Zm00001d006308_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

plastid: 20089766
plastid: 22065420
plastid: 23198870

msms PMID: 20089766 doi

G Friso, W Majeran, M Huang, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99321	Sorghum	cytosol	95.52	95.52
Os09t0552300-01	Rice	cytosol	86.08	86.7
TraesCS5D01G359900.2	Wheat	cytosol	84.2	84.4
HORVU5Hr1G002400.1	Barley	mitochondrion	52.83	83.9
TraesCS5A01G352900.1	Wheat	cytosol	84.2	83.8
TraesCS5B01G355100.1	Wheat	cytosol	83.73	83.53
GSMUA_Achr4P11760_001	Banana	cytosol	66.98	76.76
HORVU5Hr1G087690.2	Barley	cytosol, plastid	84.2	72.12
VIT_07s0031g02130.t01	Wine grape	cytosol	70.05	66.89
Bra017716.1-P	Field mustard	nucleus	67.69	66.74
CDY50618	Canola	cytosol	66.04	65.42
CDY40627	Canola	nucleus	67.92	65.31
CDX72542	Canola	nucleus	67.69	65.23
AT2G17530.1	Thale cress	cytosol	67.22	64.77
Bra011619.1-P	Field mustard	nucleus	67.69	64.64
CDX69144	Canola	nucleus	67.22	64.63
CDX75507	Canola	nucleus	67.45	64.41
Bra002070.1-P	Field mustard	cytosol	66.04	64.07
CDY24345	Canola	cytosol	66.04	64.07
KRH07798	Soybean	cytosol	66.75	63.6
KRH39422	Soybean	cytosol	66.27	63.15
KRH76530	Soybean	nucleus	66.27	63.15
Solyc02g082550.2.1	Tomato	cytosol	66.27	63.0
PGSC0003DMT400045066	Potato	cytosol	66.51	62.95
PGSC0003DMT400003820	Potato	cytosol	66.04	62.78
Bra028159.1-P	Field mustard	cytosol	54.48	62.77
KRH28929	Soybean	nucleus	65.8	62.7
AT4G35500.2	Thale cress	cytosol	64.62	62.41
CDY07839	Canola	mitochondrion	41.75	60.41
Zm00001d013273_P003	Maize	nucleus	57.08	42.91
Zm00001d034010_P002	Maize	mitochondrion, nucleus	57.55	38.55
Zm00001d021342_P017	Maize	cytosol	64.86	37.67
Zm00001d006355_P011	Maize	cytosol	64.15	34.47
Zm00001d005361_P007	Maize	cytosol, plastid	26.65	26.78
Zm00001d044338_P003	Maize	mitochondrion	24.06	26.02
Zm00001d017096_P005	Maize	cytosol	25.94	24.72
Zm00001d042938_P003	Maize	cytosol	25.94	24.55
Zm00001d050970_P003	Maize	cytosol	25.47	24.22
Zm00001d011258_P001	Maize	cytosol, nucleus, plasma membrane	21.7	23.23
Zm00001d010578_P003	Maize	cytosol, plastid	28.07	16.83
Zm00001d042979_P007	Maize	nucleus	28.77	16.44
Zm00001d012452_P004	Maize	nucleus	27.83	15.15
Zm00001d002418_P030	Maize	nucleus, plastid	24.53	11.34
Zm00001d031231_P057	Maize	nucleus	24.76	10.85
Zm00001d017754_P031	Maize	nucleus, plastid	23.82	10.73
Zm00001d013405_P004	Maize	nucleus	28.07	10.59
Zm00001d026246_P001	Maize	cytosol	22.41	10.35
Zm00001d041183_P004	Maize	nucleus	25.0	10.14
Zm00001d033798_P030	Maize	mitochondrion	27.59	10.1

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100274474	MapMan:18.4.3.5	Gene3D:3.30.200.20	UniProt:B4G1A4	EMBL:BT043142
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
ProteinID:ONM23369.1	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24055
PANTHER:PTHR24055:SF138	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI00017B8137	EnsemblPlantsGene:Zm00001d006308	EnsemblPlants:Zm00001d006308_P001	EnsemblPlants:Zm00001d006308_T001	SEG:seg	:

Description

Protein kinase superfamily protein

Coordinates

chr2:-:204222180..204225586

Molecular Weight (calculated)

47371.7 Da

IEP (calculated)

8.595

GRAVY (calculated)

-0.345

Length

424 amino acids

Sequence
(BLAST)

001: MASLFGNGGY IYSSGSEGED EDEGTEGYRK GGYHAARPGD RFAGGRFVAQ RKIGWGNFST VWLAYDTLHS RFVALKIQKS ARDYAHAALH EIELLSAVAK
101: GDPTNSKCVL RLLDHFKHAG PNGQHVCLVT EFLGDSLLRL IRYNRNKGIG LSRVKEICRS VMVGLDYLHS ELGIIHTDLK PENVLLESTI NPAKDPVRSG
201: FTPILDRPVG NQYGGTVISF SEKMLKMRAR RAVAKISQRR VSLGGVGAEL EKERCLDGIS LKCKIVDFGN ACWADQQHAG EIQTRQYRAP EVIIGSGYSY
301: SADIWSFACI AFELATGDLL FAPMNRQGCS EDEDHLALMM ETLGKMPRKI ASSGTRSKDY FDRYGDLKRV RRLKFWPLDR VLVERYSFSE PDAKGFADFL
401: RPMLDFAPED RPSAAQCLKH SWLN

Best Arabidopsis Sequence Match ( AT2G17530.1 )
(BLAST)

001: MSCSSSSGSE EDDEGFDAYR KGGYHAVRIG DQFAGGRYIA QRKLGWGQFS TVWLAYDTRT SNYVALKIQK SALQFAQAAL HEIELLQAAA DGDPENTKCV
101: IRLIDDFKHA GPNGQHLCMV LEFLGDSLLR LIKYNRYKGM ELSKVREICK CILTGLDYLH RELGMIHSDL KPENILLCST IDPAKDPIRS GLTPILEKPE
201: GNQNGTSTMN LIEKKLKRRA KKAAAKISGR RVSIVGLSET PKKNKRNLDG IDMRCKVVDF GNGCWADNKF AEEIQTRQYR APEVILQSGY SYSVDMWSFA
301: CTAFELATGD MLFAPKEGNG YGEDEDHLAL MMELLGKMPR KIAIGGARSK DYFDRHGDLK RIRRLKYWPL DRLLIDKYKL PEAEAREFAD FLCPIMDFAP
401: EKRPTAQQCL QHPWLNLRTQ NNEDDIEGQM SNMQIKGSCS

Arabidopsis Description

At2g17530 [Source:UniProtKB/TrEMBL;Acc:Q9SHL5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.