CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24345	Canola	cytosol	97.9	95.88
AT2G17530.1	Thale cress	cytosol	92.29	89.77
CDY40627	Canola	nucleus	84.81	82.31
CDX72542	Canola	nucleus	84.11	81.82
CDX75507	Canola	nucleus	83.64	80.63
CDX69144	Canola	nucleus	82.48	80.05
VIT_07s0031g02130.t01	Wine grape	cytosol	80.14	77.25
CDY07839	Canola	mitochondrion	52.8	77.13
KRH07798	Soybean	cytosol	78.5	75.51
KRH39422	Soybean	cytosol	78.27	75.28
GSMUA_Achr4P11760_001	Banana	cytosol	64.72	74.86
KRH76530	Soybean	nucleus	77.1	74.16
PGSC0003DMT400003820	Potato	cytosol	76.87	73.77
KRH28929	Soybean	nucleus	76.64	73.71
Solyc02g082550.2.1	Tomato	cytosol	76.17	73.09
PGSC0003DMT400045066	Potato	cytosol	76.4	72.99
GSMUA_Achr5P11070_001	Banana	cytosol	67.29	70.24
GSMUA_Achr2P11360_001	Banana	cytosol	71.5	69.23
EER99321	Sorghum	cytosol	66.82	67.45
HORVU5Hr1G002400.1	Barley	mitochondrion	42.06	67.42
GSMUA_Achr1P02800_001	Banana	cytosol	64.95	67.15
Zm00001d006308_P001	Maize	plastid	65.42	66.04
Os09t0552300-01	Rice	cytosol	64.72	65.8
TraesCS5A01G352900.1	Wheat	cytosol	64.72	65.02
TraesCS5D01G359900.2	Wheat	cytosol	64.25	65.01
TraesCS5B01G355100.1	Wheat	cytosol	64.02	64.47
HORVU5Hr1G087690.2	Barley	cytosol, plastid	65.19	56.36
CDY09171	Canola	nucleus	50.7	43.75
CDY26961	Canola	nucleus	54.67	43.58
CDX92332	Canola	nucleus	54.44	43.47
CDX78145	Canola	nucleus	54.44	42.6
TraesCS2D01G246700.1	Wheat	nucleus	67.99	41.93
TraesCS2B01G258500.1	Wheat	nucleus	67.76	41.79
TraesCS2A01G244200.2	Wheat	nucleus	67.76	41.79
Zm00001d021342_P017	Maize	cytosol	67.76	39.73
EER99364	Sorghum	cytosol	67.29	39.08
HORVU2Hr1G053190.2	Barley	cytosol	67.76	38.98
CDX73580	Canola	nucleus	54.67	36.91
Zm00001d006355_P011	Maize	cytosol	67.52	36.63
CDX75268	Canola	nucleus	25.7	27.64
CDX68873	Canola	nucleus	25.7	27.57
Os07t0472400-01	Rice	plasma membrane	34.35	27.07
CDX76200	Canola	endoplasmic reticulum, plasma membrane, plastid	8.18	25.55
CDX78188	Canola	cytosol	25.47	23.96
CDX73543	Canola	nucleus	25.47	23.64
CDY06452	Canola	plasma membrane	25.7	20.72
CDX93215	Canola	cytosol	25.93	19.37
CDY07061	Canola	cytosol	25.93	19.34
CDY65761	Canola	nucleus	26.17	19.11
CDX74804	Canola	cytosol	26.17	19.08
CDY03422	Canola	plastid	25.7	15.13
CDY34307	Canola	plastid	25.47	14.99
CDY52749	Canola	nucleus	25.7	13.55
CDY07581	Canola	nucleus	25.7	13.11
CDY13591	Canola	nucleus	25.47	12.3
CDX83561	Canola	nucleus	25.7	12.2
CDX74622	Canola	nucleus	25.7	12.17
CDY37643	Canola	nucleus	25.7	12.06
CDY38548	Canola	nucleus	25.7	11.71
CDX92157	Canola	nucleus	26.17	10.96
CDX72990	Canola	nucleus	26.87	10.83
CDX95825	Canola	nucleus	26.17	10.69
CDX96477	Canola	nucleus	26.87	10.67
CDY11106	Canola	nucleus	26.87	10.05
CDX68227	Canola	nucleus	27.1	9.75
CDY04183	Canola	cytosol, nucleus, plasma membrane	25.47	8.25
CDY39184	Canola	nucleus	25.23	7.9
CDY03423	Canola	cytosol, peroxisome, plastid	0.7	0.96

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.5	Gene3D:3.30.200.20	GO:A0A078INI0	UniProt:A0A078INI0	EnsemblPlants:CDY50618
ProteinID:CDY50618	ProteinID:CDY50618.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00097154001
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24055	PANTHER:PTHR24055:SF138	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EB1EE1	SEG:seg	:	:	:

Description

BnaC01g44200DBnaC01g44200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078INI0]

Coordinates

chrLK032927:-:31044..33571

Molecular Weight (calculated)

48292.8 Da

IEP (calculated)

7.694

GRAVY (calculated)

-0.450

Length

428 amino acids

Sequence
(BLAST)

001: MSCSSSSGSE EDDEGFDSYR KGGYHAVRIG DQFSGGRYIA QRKLGWGQFS TVWLAYDTHT SNYVALKIQK SAQHFSQAAL HEIELLQAAA DGDPANTKCV
101: VRLIDDFKHA GPNGQHLCMV LEFLGDSLLR LIKYNRYKAM ELNKVREICK CILTGLDYLH RELGMIHSDL KPENILLCST IDAAKDPIRS GLTPILEKPE
201: GNQNGAATMN LIEKKLKRRA RRAVAKISGR RVSIVGLSET PTKTVRSLDG IDMRCKVVDF GNACWADNKF AEEIQTRQYR APEVILQSGY SFSVDMWSFA
301: CTAFELATGD MLFAPKDGNG YGEDEDHLAL MMELLGKIPR KIATGGARSK DYFDRHGDLK RIRRLKYWPL DRLLTDKYKL PEAEAREFAE FLCPILAFEP
401: EKRPTAQQCL QHPWLNLRAQ NNEDQVEG

Best Arabidopsis Sequence Match ( AT2G17530.3 )
(BLAST)

001: MSCSSSSGSE EDDEGFDAYR KGGYHAVRIG DQFAGGRYIA QRKLGWGQFS TVWLAYDTRT SNYVALKIQK SALQFAQAAL HEIELLQAAA DGDPENTKCV
101: IRLIDDFKHA GPNGQHLCMV LEFLGDSLLR LIKYNRYKGM ELSKVREICK CILTGLDYLH RELGMIHSDL KPENILLCST IDPAKDPIRS GLTPILEKPE
201: GNQNGTSTMN LIEKKLKRRA KKAAAKISGR RVSIVGLSET PKKNKRNLDG IDMRCKVVDF GNGCWADNKF AEEIQTRQYR APEVILQSGY SYSVDMWSFA
301: CTAFELATGD MLFAPKEGNG YGEDEDHLAL MMELLGKMPR KIAIGGARSK DYFDRHGDLK RIRRLKYWPL DRLLIDKYKL PEAEAREFAD FLCPIMDFAP
401: EKRPTAQQCL QHPWLNLRTQ NNEDDIEGQM SNMQIKGSCS

Arabidopsis Description

At2g17530 [Source:UniProtKB/TrEMBL;Acc:Q9SHL5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.