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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • plastid 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX92157 Canola nucleus 93.42 95.79
Bra022240.1-P Field mustard nucleus 94.56 95.38
PGSC0003DMT400079686 Potato cytosol 24.62 89.58
PGSC0003DMT400069308 Potato golgi, vacuole 29.01 83.52
AT3G17750.1 Thale cress nucleus 83.02 76.45
Os03t0719500-02 Rice cytosol, nucleus 39.89 62.2
CDX72990 Canola nucleus 55.06 54.33
KRH60590 Soybean nucleus 56.87 54.23
CDX96477 Canola nucleus 55.25 53.71
GSMUA_Achr3P02060_001 Banana nucleus 50.29 53.02
KRH38978 Soybean nucleus 58.87 52.69
KRH09504 Soybean nucleus 59.16 52.59
GSMUA_Achr2P21700_001 Banana nucleus 55.53 52.39
Solyc03g098150.2.1 Tomato nucleus 57.73 51.93
CDY11106 Canola nucleus 55.82 51.14
KXG37702 Sorghum nucleus 53.72 51.14
HORVU4Hr1G008530.1 Barley nucleus 53.72 51.09
TraesCS4B01G051900.1 Wheat nucleus 53.63 50.81
KRH41895 Soybean nucleus 54.2 50.8
TraesCS4A01G263100.1 Wheat nucleus 53.44 50.68
TraesCS4D01G052100.1 Wheat nucleus 53.53 50.63
GSMUA_Achr11P... Banana nucleus 52.29 49.95
CDX68227 Canola nucleus 56.39 49.66
Zm00001d013405_P004 Maize nucleus 52.48 48.93
Zm00001d033798_P030 Maize mitochondrion 53.53 48.45
Solyc06g072340.2.1 Tomato nucleus 55.44 47.98
CDX93215 Canola cytosol 26.14 47.82
CDY07061 Canola cytosol 25.95 47.39
CDX74804 Canola cytosol 26.24 46.85
CDY65761 Canola nucleus 26.05 46.59
GSMUA_Achr7P11320_001 Banana nucleus 53.24 43.39
PGSC0003DMT400079685 Potato nucleus 29.58 35.51
VIT_01s0011g01590.t01 Wine grape mitochondrion 59.35 34.33
CDX75268 Canola nucleus 10.97 28.89
CDX76200 Canola endoplasmic reticulum, plasma membrane, plastid 3.72 28.47
CDX68873 Canola nucleus 10.78 28.32
CDY50618 Canola cytosol 10.69 26.17
CDY24345 Canola cytosol 10.59 25.4
CDY06452 Canola plasma membrane 12.79 25.24
CDX78188 Canola cytosol 10.88 25.05
CDX75507 Canola nucleus 10.5 24.77
CDX72542 Canola nucleus 10.4 24.77
CDX73543 Canola nucleus 10.88 24.73
CDY40627 Canola nucleus 10.31 24.49
CDX69144 Canola nucleus 10.21 24.26
CDY07839 Canola mitochondrion 6.2 22.18
CDY26961 Canola nucleus 10.69 20.86
CDX92332 Canola nucleus 10.59 20.71
CDY09171 Canola nucleus 9.73 20.56
CDX78145 Canola nucleus 10.21 19.56
CDX73580 Canola nucleus 10.4 17.19
CDY34307 Canola plastid 11.64 16.78
CDY03422 Canola plastid 11.64 16.78
CDY13591 Canola nucleus 14.03 16.59
CDX83561 Canola nucleus 14.12 16.41
CDX74622 Canola nucleus 13.36 15.49
CDY37643 Canola nucleus 13.45 15.46
CDY38548 Canola nucleus 13.26 14.8
CDY52749 Canola nucleus 10.69 13.79
CDY07581 Canola nucleus 10.59 13.23
CDY04183 Canola cytosol, nucleus, plasma membrane 13.93 11.04
CDY39184 Canola nucleus 13.17 10.1
CDY03423 Canola cytosol, peroxisome, plastid 0.38 1.28
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.3.3Gene3D:3.30.200.20GO:A0A078E213EnsemblPlants:CDX95825ProteinID:CDX95825
ProteinID:CDX95825.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488
GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00101771001InterPro:IPR000719InterPro:Kinase-like_dom_sf
PFAM:PF00069ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR24058PANTHER:PTHR24058:SF23InterPro:Prot_kinase_dom
SMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0004EDEBFCSEG:seg:
Description
BnaC05g35760D
Coordinates
chrLK031891:-:515277..519762
Molecular Weight (calculated)
117216.0 Da
IEP (calculated)
4.671
GRAVY (calculated)
-0.640
Length
1048 amino acids
Sequence
(BLAST)
0001: MEEASSSSID SILEFLRKNR FMRAEAALIS ELSNNSSSSN GVKSKVFDKK QGRDKNQVSD ELVVKEIQCG SATESHHQQM NDVSVQTQST SGANNSSLWE
0101: DRFTFSESLV DTELDLPPWN HADSEVYSID PSITSFVNPR SSKPSSHDKV PRQVSQYDHG KASHSLEDDS MAAIQEGFIT TSWPRSEERT DHWKDCSVTT
0201: VYPLSKGSTS TNNLGVPVVD KRQGKKKVGA SDSKVVIKEQ DDDDVETALC LGKSHSGYEV KNLSGFAFSL AHDGAREDLP RLPHVRIKSE DKSMNYTSEE
0301: KHERDVLDEK LINTENGFLI GSYLDVPIGQ EIHSSGGRIA GGGNWLSVSQ GLAEDASDLI FGFGNGLGDL AEHSNEYWDS DEYDDDDDVG YIRQPIEDEA
0401: WFLGHEVDYP TEQEKDTEHT QDKSQTKNED DHSFAEEDSY FSGEQYVLAK GVEPVTTKEP DLVARYDGEL MDATELSLMR AEPVWQGLVT HENDLVLSNK
0501: GRGDDNGGRF CSKDIRAEDD RNAAVRSIGV GISDDVDDNG CIAPDYFPGE GSEWDLELLP HRQVGAASVK PPPGKGANMQ LKSFTNGGFS FPSPVPDGHI
0601: SHDDSTNPVW SNPAVRNESY GPKGLTESNS MVGRNGEKVE SSRSSSPSAV SHSSYTGREH CKEEDEEETS PAPEEDPGTS FEDEDAIVVQ EQVRQIKAQE
0701: QEFETFNLKI VHRKNRTGFE EDKNFHVVLN SVIAGRYHVT EHLGSAAFSK AIQAHDLHTG IDVCVKIIKN NKDFFDQSLD EIKLLKYVNQ HDPADKYHLL
0801: RLYDYFYFRE HLLIVCELLK ANLYEFQKFN RESGGEVYFT MPRLQSITIQ CLEALNFLHG LGLIHCDLKP ENILIKSYSR CEIKVIDLGS SCFETDHLCS
0901: YVQSRSYRAP EVILGLPYDK KIDIWSLGCI LAELCSGNVL FQNDSPATLL ARVIGIIGSI DQQMLAKGPD TCKYFTKTYL LYERNQESNN LEYLIPKKSS
1001: LRRRLPMGDQ GFIDFVAHLL QVDPKKRPSA SEALKHPWLT HPYEPISP
Best Arabidopsis Sequence Match ( AT3G17750.1 )
(BLAST)
0001: MEDSSSIDSI LEFLRKNHFM RAEAALISEL SKKPSSNGSL QKLNFEDNCV SKLLDKKKQG GSSQALGLHN DSHISDELVV KEIQCGAANN LHESNLMNDV
0101: SVQTQSGNAD FWEERFTFAE GFEDTELDLP PWNHTSTDIV ADSEEYSINP SKRGFVNPRS SKQSSHEKVP EPGKSNKVVV EDVFSSFEKI RTGSSSQVSQ
0201: YDHGKACQSL EVDNKVGNSA IQEGFVTTSW SRSEENIGAS PDHWKDCSVT TVFPLSKGST STKDNGVAIL DKWQGKKLVG ASDSRILIKE QEDDVATALY
0301: LGKSQSGYEH KIPSSLAFSL AHDAPREDLP RLPHVKIKSE DKLMNFTWEE KHERDILDEK LINTDNAFLL GSYLDVPIGQ EINSSGGKMA GGGNWLSVSH
0401: GIADDASDLI FGFGDGLGAL NEHSNEYWDS DEYDDDDDVG YIRQPIEDEA WFLGHEVDYP SDNEKGTEHG SVPDTQDKSQ TKNDDDHSFA EEDSYFSGEQ
0501: YVLAKGIEPV TASNDPMGLS MTETYSTTKQ ADLVARYDGQ LMDAEELSLM DTEPVWKGFV SHENDVILLK KGKVEDNSGR ICRKDIRAED DRNAAVRSIG
0601: VGMSDDVDDN GSIIPEYFPG EGSEWDLELL PYRGVGVAGV KPPPGKGASM LLKNFADGGF SFPSPVADRQ KSQDDSANPE WSNHCDAVVR NESDEPKGLI
0701: QSDSMIVSST KRCSGSSSER NLRDMDDEKV ASSRNSSPSA LSHSSDTGRE HKEEDEEETS HGPEEDPGTS FEDEDAIVVQ EQVRQIQAQE QDFETFNLKI
0801: VHRKNRTGFE EDKNFHVVLN SVIAGRYHVT EHLGSAAFSK AIQAHDLHTG IDVCVKIIKN NKDFFDQSLD EIKLLKYVNQ HDPADKYHLL RLYDYFYFRE
0901: HLLIVCELLK ANLYEFQKFN RESGGEVYFT MPRLQSITIQ CLEALNFLHG LGLIHCDLKP ENILIKSYSR CEIKVIDLGS SCFETDHLCS YVQSRSYRAP
1001: EVILGLPYDK KIDIWSLGCI LAELCTGNVL FQNDSPATLL ARVIGIIGSI DQEMLAKGRD TCKYFTKNHL LYERNQESNN LEYLIPKKSS LRRRLPMGDQ
1101: GFIDFVAYLL QVDPKKRPSA FEALKHPWLT YPYEPISA
Arabidopsis Description
AT3g17750/MIG5_4 [Source:UniProtKB/TrEMBL;Acc:Q8RX85]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.