CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY52749	Canola	nucleus	93.09	96.18
CDX73543	Canola	nucleus	50.54	91.97
CDX78188	Canola	cytosol	49.82	91.87
AT3G53570.1	Thale cress	cytosol	50.54	90.79
VIT_08s0040g02640.t01	Wine grape	nucleus	41.36	80.89
KRH67569	Soybean	nucleus	40.41	76.35
PGSC0003DMT400061423	Potato	nucleus	38.98	75.87
CDX76200	Canola	endoplasmic reticulum, plasma membrane, plastid	12.28	75.18
Os01t0837900-01	Rice	nucleus	38.86	75.12
KXG33666	Sorghum	cytosol	38.86	75.12
GSMUA_Achr5P29170_001	Banana	nucleus	38.5	74.08
TraesCS6A01G241200.1	Wheat	cytosol	38.26	73.96
GSMUA_Achr9P03190_001	Banana	nucleus	38.26	73.62
HORVU6Hr1G061750.11	Barley	nucleus	38.14	73.56
TraesCS6D01G223400.1	Wheat	nucleus	38.02	73.5
TraesCS6B01G283400.1	Wheat	nucleus	37.78	73.04
KRG95853	Soybean	cytosol	24.79	72.47
Zm00001d042938_P003	Maize	cytosol	38.38	71.88
CDX68873	Canola	nucleus	29.2	61.4
CDX75268	Canola	nucleus	29.08	61.31
CDY34307	Canola	plastid	36.23	41.82
CDY03422	Canola	plastid	36.11	41.68
CDY50618	Canola	cytosol	13.11	25.7
CDY24345	Canola	cytosol	13.23	25.4
CDX75507	Canola	nucleus	13.35	25.23
CDY40627	Canola	nucleus	13.23	25.17
CDX72542	Canola	nucleus	13.11	25.0
CDX69144	Canola	nucleus	13.11	24.94
CDY07839	Canola	mitochondrion	8.7	24.91
CDX78145	Canola	nucleus	15.73	24.13
CDY09171	Canola	nucleus	13.47	22.78
CDY26961	Canola	nucleus	14.18	22.16
CDX92332	Canola	nucleus	14.06	22.01
CDY06452	Canola	plasma membrane	13.47	21.28
CDX73580	Canola	nucleus	15.97	21.14
CDX93215	Canola	cytosol	13.11	19.2
CDY07061	Canola	cytosol	13.11	19.16
CDX74804	Canola	cytosol	12.87	18.4
CDY65761	Canola	nucleus	12.63	18.09
CDX74622	Canola	nucleus	15.61	14.49
CDY37643	Canola	nucleus	15.49	14.25
CDY38548	Canola	nucleus	15.26	13.63
CDY13591	Canola	nucleus	13.11	12.42
CDX83561	Canola	nucleus	12.87	11.97
CDX92157	Canola	nucleus	13.23	10.86
CDX72990	Canola	nucleus	13.47	10.64
CDX95825	Canola	nucleus	13.23	10.59
CDX96477	Canola	nucleus	13.47	10.48
CDY11106	Canola	nucleus	13.35	9.79
CDX68227	Canola	nucleus	13.47	9.5
CDY04183	Canola	cytosol, nucleus, plasma membrane	14.06	8.93
CDY39184	Canola	nucleus	13.47	8.27
CDY03423	Canola	cytosol, peroxisome, plastid	2.15	5.75

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.10	MapMan:18.4.3.2	Gene3D:3.30.200.20	GO:A0A078F2J3	UniProt:A0A078F2J3
EnsemblPlants:CDY07581	ProteinID:CDY07581	ProteinID:CDY07581.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00124663001	InterPro:IPR000719
InterPro:IPR011990	InterPro:IPR013026	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS50293	PANTHER:PTHR24058	PANTHER:PTHR24058:SF44	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF48452
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	UniParc:UPI0004EDDDAB
SEG:seg	:	:	:	:	:

Description

BnaC06g14830DBnaC06g14830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F2J3]

Coordinates

chrLK031979:+:844575..849151

Molecular Weight (calculated)

96696.1 Da

IEP (calculated)

9.284

GRAVY (calculated)

-0.376

Length

839 amino acids

Sequence
(BLAST)

001: MQSSVHREKA SSIAMILETR RNVEFPHRNV DKRPRKRPRL AWDAPPLPPP STVFHPPLYY GPEFAGGLVP SFGYPNMFYN GLPRQGSPPW RPDDKDGHFS
101: FVVGDTLTPR YQILSKMGEG TFGQVLECFD DKHKEAVAIK VIRSVPKYRE AAMIEIDVLQ RLARHDVGGS RCVQIRNWFD YRNHICIVFE KLGPSLYDFL
201: RKNSYRSFPI DLVRELGRQL LESVAYMHDL RLIHTDLKPE NVLLVSSEYI KIPDYKFLSR PTRDGSYFKN LPKSSAIKLI DFGSTTLEHQ DHSHIVSTRH
301: YRAPEVILGV GWNYPCDLWS IGCILVELCS GEALFQTHEN LEHLAMMERV LGPLPPQMVL RADRRSDRYF RRGAKLDWPE GATSRDSLKA VWKLPRLPNL
401: IMQHVDHSAG DLIDLLLGLL RYDPTERLKA REALNHPFFT RSREQKMKRK RERHVPCLVF FSLLLCLFLV FIFRPRPRLS FGGCLKRVIT VTLHLKVTIS
501: LTEWTRFISM MESLGRLQPF HLSFPKHPTF APFRPLIRPN SSFKHTPIKA SSSKSQNPIT PLQKSTPFRL FKSTCITLTT TAALLFVNLQ LKPAAIAAPV
601: APPPSTESKE QHVTLEEEER ALEEHLATHP PDVDSLRSLM EVKIRSRKLT EAVEVVDRLI KLEPEEPEWP VLKANIFTYS GEIDSAKASF EDILAKDPLR
701: VEAYHGLVMA YSDAGLDLNE VESRIEEAML RCKKENNHND FRDFKLLLAQ IRVIEGKHGE ALKLYRELVK EEPADFRPYL CQGVIYTLLK KKDKAEEQFD
801: KFRELVPENH PYREYFMDNL IASKLFSEKT QREMAGSAS

Best Arabidopsis Sequence Match ( AT3G53570.1 )
(BLAST)

001: MQSSVYRDKA SSIAMILETQ RNVEFPHRIV DKRPRKRPRL TWDAAPPLLP PPPPPTVFQP PLYYGPEFAS GLVPNFVYPN MFYNGLPRQG SPPWRPDDKD
101: GHYVFVVGDT LTPRYQILSK MGEGTFGQVL ECFDNKNKEV VAIKVIRSIN KYREAAMIEI DVLQRLTRHD VGGSRCVQIR NWFDYRNHIC IVFEKLGPSL
201: YDFLRKNSYR SFPIDLVREL GRQLLESVAY MHDLRLIHTD LKPENILLVS SEYIKIPDYK FLSRPTKDGS YFKNLPKSSA IKLIDFGSTT FEHQDHNYIV
301: STRHYRAPEV ILGVGWNYPC DLWSIGCILV ELCSGEALFQ THENLEHLAM MERVLGPLPP HMVLRADRRS EKYFRRGAKL DWPEGATSRD SLKAVWKLPR
401: LPNLIMQHVD HSAGDLIDLL QGLLRYDPTE RFKAREALNH PFFTRSREQS IPPFNPNPHP FLYNQKN

Arabidopsis Description

AFC1AT3G53570 protein [Source:UniProtKB/TrEMBL;Acc:B9DH08]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.