CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG95853	Soybean	cytosol	55.86	86.41
VIT_08s0040g02640.t01	Wine grape	nucleus	83.33	86.25
PGSC0003DMT400061423	Potato	nucleus	79.05	81.44
KXG33666	Sorghum	cytosol	76.13	77.88
Os01t0837900-01	Rice	nucleus	75.9	77.65
GSMUA_Achr5P29170_001	Banana	nucleus	76.13	77.52
GSMUA_Achr9P03190_001	Banana	nucleus	75.9	77.29
Bra007012.1-P	Field mustard	cytosol	76.35	76.87
HORVU6Hr1G061750.11	Barley	nucleus	74.55	76.09
TraesCS6A01G241200.1	Wheat	cytosol	74.32	76.04
TraesCS6D01G223400.1	Wheat	nucleus	74.1	75.81
TraesCS6B01G283400.1	Wheat	nucleus	73.87	75.58
Zm00001d042938_P003	Maize	cytosol	76.13	75.45
AT3G53570.1	Thale cress	cytosol	79.05	75.16
CDX73543	Canola	nucleus	77.48	74.62
CDX78188	Canola	cytosol	76.35	74.51
KRH63654	Soybean	nucleus	68.69	71.76
KRH54290	Soybean	cytosol, nucleus	68.47	71.53
KRH57157	Soybean	cytosol	69.14	71.4
KRH61991	Soybean	cytosol	48.65	66.06
KRH03872	Soybean	nucleus	70.05	65.89
CDX76200	Canola	endoplasmic reticulum, plasma membrane, plastid	20.27	65.69
KRH52649	Soybean	nucleus	58.33	64.27
KRG94066	Soybean	cytosol	16.89	56.82
CDY52749	Canola	nucleus	76.58	41.87
CDY07581	Canola	nucleus	76.35	40.41
KRH63030	Soybean	cytosol, nucleus	17.79	29.81
KRH28929	Soybean	nucleus	23.87	23.82
KRH76530	Soybean	nucleus	23.65	23.6
KRH07798	Soybean	cytosol	23.65	23.6
KRH39422	Soybean	cytosol	23.42	23.37
KRH32624	Soybean	nucleus	26.58	21.57
KRH22757	Soybean	nucleus	26.13	21.25
KRH26554	Soybean	nucleus	25.9	21.1
KRH20002	Soybean	nucleus	24.1	20.62
KRH25147	Soybean	mitochondrion	24.1	19.35
KRH14940	Soybean	nucleus	24.1	15.07
KRH73194	Soybean	nucleus	24.55	14.99
KRH07651	Soybean	nucleus	26.35	12.3
KRH35970	Soybean	nucleus	27.48	12.24
KRG90793	Soybean	nucleus	27.25	12.23
KRH45354	Soybean	nucleus	26.35	12.23
KRH60590	Soybean	nucleus	25.68	10.37
KRH09504	Soybean	nucleus	26.35	9.92
KRH38978	Soybean	nucleus	25.9	9.82
KRH41895	Soybean	nucleus	23.2	9.21
KRH75392	Soybean	nucleus	12.61	6.53

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100808061	MapMan:18.4.3.2	Gene3D:3.30.200.20	EMBL:ACUP02002068	EnsemblPlantsGene:GLYMA_03G173600
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	UniProt:I1JPE8	InterPro:IPR000719	EnsemblPlants:KRH67569	ProteinID:KRH67569
ProteinID:KRH67569.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24058
PANTHER:PTHR24058:SF44	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF101447	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI000233A90F	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:38756022..38760549

Molecular Weight (calculated)

51645.5 Da

IEP (calculated)

9.188

GRAVY (calculated)

-0.477

Length

444 amino acids

Sequence
(BLAST)

001: METQRIIEFP HRNMDKRPRK KQRLTWDMHV PPPPPPPPPL PPPKLQVLPT MYCKQEVGNG VVPNHAYPSL FYRGMPRNGS PPWRPDDKDG HYVFAVGENL
101: TPRYKILSKM GEGTFGQVLE CLDNEKEEIV AIKVVRSINK YREAARTEIE VLLRLARHDV DGAHCVQIRN WFDYRNHICI VFEKLGPSLY DFLRKNSYRS
201: FPIDLVREFG RQLLESVAFM HDLCLIHTDL KPENILLISS EFIKVPDYKF LSRNTKDGSY FKNLPKSSAI KLIDFGSTSF EHQDHSYVVS TRHYRAPEVI
301: LGLGWNYPCD LWSVGCILVE LCSGEALFQT HENLEHLAMM ERVLGPLPPH MVVRADRRAE KYFKRGTRLS WPDSSTSRES MRAVWKLPRL PNLIMQHVDH
401: SAGDLIDLLQ GLLRYDPSER LKAKEALRHP FFFTRDTKRY GYPL

Best Arabidopsis Sequence Match ( AT3G53570.1 )
(BLAST)

001: MQSSVYRDKA SSIAMILETQ RNVEFPHRIV DKRPRKRPRL TWDAAPPLLP PPPPPTVFQP PLYYGPEFAS GLVPNFVYPN MFYNGLPRQG SPPWRPDDKD
101: GHYVFVVGDT LTPRYQILSK MGEGTFGQVL ECFDNKNKEV VAIKVIRSIN KYREAAMIEI DVLQRLTRHD VGGSRCVQIR NWFDYRNHIC IVFEKLGPSL
201: YDFLRKNSYR SFPIDLVREL GRQLLESVAY MHDLRLIHTD LKPENILLVS SEYIKIPDYK FLSRPTKDGS YFKNLPKSSA IKLIDFGSTT FEHQDHNYIV
301: STRHYRAPEV ILGVGWNYPC DLWSIGCILV ELCSGEALFQ THENLEHLAM MERVLGPLPP HMVLRADRRS EKYFRRGAKL DWPEGATSRD SLKAVWKLPR
401: LPNLIMQHVD HSAGDLIDLL QGLLRYDPTE RFKAREALNH PFFTRSREQS IPPFNPNPHP FLYNQKN

Arabidopsis Description

AFC1AT3G53570 protein [Source:UniProtKB/TrEMBL;Acc:B9DH08]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.