Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
endoplasmic reticulum: 28499913 nucleus: 28499913 |
msms PMID:
21132161
doi
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID:
28499913
doi
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH20002 | Soybean | nucleus | 89.21 | 94.03 |
| VIT_08s0007g04220.t01 | Wine grape | nucleus | 79.34 | 77.92 |
| GSMUA_Achr8P26710_001 | Banana | cytosol | 58.5 | 72.23 |
| AT3G53030.1 | Thale cress | nucleus | 69.1 | 71.46 |
| PGSC0003DMT400006951 | Potato | mitochondrion, nucleus | 70.93 | 70.93 |
| KRH26554 | Soybean | nucleus | 70.38 | 70.64 |
| KRH22757 | Soybean | nucleus | 70.02 | 70.15 |
| Solyc10g085720.1.1 | Tomato | nucleus | 66.73 | 69.79 |
| GSMUA_Achr8P04590_001 | Banana | nucleus | 60.88 | 69.67 |
| PGSC0003DMT400021639 | Potato | nucleus | 66.73 | 69.52 |
| HORVU4Hr1G018630.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 23.22 | 69.4 |
| Solyc09g008790.2.1 | Tomato | cytosol | 70.02 | 69.13 |
| HORVU3Hr1G049750.1 | Barley | mitochondrion | 22.67 | 67.76 |
| CDX78145 | Canola | nucleus | 67.64 | 67.64 |
| HORVU7Hr1G058230.1 | Barley | cytosol | 13.53 | 66.67 |
| HORVU6Hr1G019910.4 | Barley | cytosol | 19.2 | 66.04 |
| Os03t0748400-01 | Rice | nucleus | 48.63 | 65.04 |
| HORVU1Hr1G034750.1 | Barley | cytosol | 18.65 | 64.15 |
| Zm00001d013273_P003 | Maize | nucleus | 64.9 | 62.94 |
| TraesCS5B01G392200.1 | Wheat | nucleus | 64.53 | 62.81 |
| EER93458 | Sorghum | nucleus | 65.08 | 62.79 |
| TraesCS5D01G397000.1 | Wheat | nucleus | 64.35 | 62.63 |
| TraesCS5A01G387100.1 | Wheat | nucleus | 64.17 | 62.46 |
| HORVU5Hr1G094810.3 | Barley | nucleus | 63.62 | 62.03 |
| KRH25147 | Soybean | mitochondrion | 62.52 | 61.84 |
| Bra006970.1-P | Field mustard | nucleus | 67.64 | 59.97 |
| HORVU2Hr1G091920.1 | Barley | cytosol | 33.09 | 59.74 |
| HORVU3Hr1G021690.1 | Barley | cytosol | 26.69 | 58.87 |
| HORVU1Hr1G094650.1 | Barley | nucleus | 31.63 | 58.84 |
| CDX73580 | Canola | nucleus | 68.19 | 58.83 |
| HORVU7Hr1G090500.1 | Barley | cytosol | 31.63 | 58.45 |
| HORVU4Hr1G059640.3 | Barley | golgi, mitochondrion, plasma membrane | 37.84 | 57.34 |
| HORVU3Hr1G021740.1 | Barley | cytosol | 26.14 | 55.86 |
| Zm00001d034010_P002 | Maize | mitochondrion, nucleus | 64.35 | 55.61 |
| KRH39422 | Soybean | cytosol | 44.79 | 55.06 |
| KRH07798 | Soybean | cytosol | 44.61 | 54.83 |
| HORVU5Hr1G046420.1 | Barley | nucleus | 25.96 | 54.62 |
| KRH76530 | Soybean | nucleus | 43.88 | 53.93 |
| KRH28929 | Soybean | nucleus | 43.69 | 53.71 |
| HORVU1Hr1G082710.1 | Barley | nucleus, plastid | 40.95 | 53.21 |
| HORVU2Hr1G066530.1 | Barley | nucleus | 39.12 | 52.97 |
| HORVU7Hr1G121360.1 | Barley | cytosol, mitochondrion, nucleus | 30.35 | 50.0 |
| HORVU6Hr1G081350.5 | Barley | nucleus | 32.91 | 49.86 |
| KRH61991 | Soybean | cytosol | 19.2 | 32.11 |
| KRH63030 | Soybean | cytosol, nucleus | 14.99 | 30.94 |
| KRH52649 | Soybean | nucleus | 21.02 | 28.54 |
| KRH63654 | Soybean | nucleus | 21.39 | 27.53 |
| KRH54290 | Soybean | cytosol, nucleus | 21.02 | 27.06 |
| KRG95853 | Soybean | cytosol | 14.08 | 26.83 |
| KRH57157 | Soybean | cytosol | 21.02 | 26.74 |
| KRH67569 | Soybean | nucleus | 21.57 | 26.58 |
| KRH03872 | Soybean | nucleus | 21.21 | 24.58 |
| KRG94066 | Soybean | cytosol | 5.67 | 23.48 |
| KRH14940 | Soybean | nucleus | 19.74 | 15.21 |
| KRH73194 | Soybean | nucleus | 20.11 | 15.13 |
| KRH07651 | Soybean | nucleus | 24.68 | 14.2 |
| KRH45354 | Soybean | nucleus | 24.68 | 14.11 |
| KRG90793 | Soybean | nucleus | 21.57 | 11.93 |
| KRH35970 | Soybean | nucleus | 21.57 | 11.84 |
| KRH60590 | Soybean | nucleus | 21.21 | 10.55 |
| KRH38978 | Soybean | nucleus | 21.02 | 9.82 |
| KRH09504 | Soybean | nucleus | 21.02 | 9.75 |
| KRH41895 | Soybean | nucleus | 18.46 | 9.03 |
| KRH75392 | Soybean | nucleus | 10.97 | 6.99 |
Protein Annotations
| Gene3D:1.10.510.10 | EntrezGene:100803070 | MapMan:18.4.3.5 | Gene3D:3.30.200.20 | EMBL:ACUP02006142 | EnsemblPlantsGene:GLYMA_10G064600 |
| GO:GO:0000166 | GO:GO:0000245 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016301 | GO:GO:0016740 |
| GO:GO:0019538 | GO:GO:0035556 | GO:GO:0050684 | UniProt:I1L959 | InterPro:IPR000719 | EnsemblPlants:KRH32624 |
| ProteinID:KRH32624 | ProteinID:KRH32624.1 | InterPro:Kinase-like_dom_sf | PFAM:PF00069 | ScanProsite:PS00107 | ScanProsite:PS00108 |
| PFscan:PS50011 | PANTHER:PTHR24055 | PANTHER:PTHR24055:SF228 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 |
| SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI0001CABD54 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr10:-:6146718..6153486
Molecular Weight (calculated)
61506.1 Da
IEP (calculated)
7.482
GRAVY (calculated)
-0.612
Length
547 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDKHQQHHQ DDSSDFTSED EGTEDYRRGG YHAVRIGDAF SAGRYVVQSK LGWGHFSTVW LAWDTKHSRY VALKVQKSAQ HYTEAAMDEI TILQQIAEGD
101: PDDKKCVVKL LDHFKHSGPN GQHVCMVFEY LGDNLLTLIK YSDYRGLPIA MVKEICFHIL AGLDYLHQQL SIIHTDLKPE NILLLSTIDP SKDPRKSGAP
201: LILPNSKDKM AMESAGMKDT KMLNGDLVKN HKKKIKRKAK QAAHGCVEKE ASEGVEGNAE TSGAVESSPN ASSAREQTSS SAGTSQLSDA DGTKLKEQGN
301: KRGSRSMRQK LLASVDLKCK LVDFGNACWT YKQFTNDIQT RQYRCPEVIL GSKYSTSADL WSFACICFEL ATGDVLFDPH SGDNFDRDED HLALMMELLG
401: MMPRKIALGG RYSRDFFNRY GDLRHIRRLR FWPLNKVLLE KYDLSEKDAN DMTDFLVPIL DFVPEKRPTA GQCLLHPWMN AGPRLLEPSV PSNHNPAAET
501: SVSDQKRKDK DEREAMETGM GNIVINSDFK PLMHSPSKKV FQGRSQK
101: PDDKKCVVKL LDHFKHSGPN GQHVCMVFEY LGDNLLTLIK YSDYRGLPIA MVKEICFHIL AGLDYLHQQL SIIHTDLKPE NILLLSTIDP SKDPRKSGAP
201: LILPNSKDKM AMESAGMKDT KMLNGDLVKN HKKKIKRKAK QAAHGCVEKE ASEGVEGNAE TSGAVESSPN ASSAREQTSS SAGTSQLSDA DGTKLKEQGN
301: KRGSRSMRQK LLASVDLKCK LVDFGNACWT YKQFTNDIQT RQYRCPEVIL GSKYSTSADL WSFACICFEL ATGDVLFDPH SGDNFDRDED HLALMMELLG
401: MMPRKIALGG RYSRDFFNRY GDLRHIRRLR FWPLNKVLLE KYDLSEKDAN DMTDFLVPIL DFVPEKRPTA GQCLLHPWMN AGPRLLEPSV PSNHNPAAET
501: SVSDQKRKDK DEREAMETGM GNIVINSDFK PLMHSPSKKV FQGRSQK
001: MEAEKWNSDG GEYTSEDEGT EDYRRGGYHA VRIGDSFKTG RYVVQSKLGW GHFSTVWLSW DTQSSRYVAL KVQKSAQHYT EAAMDEITIL QQIAEGDTDD
101: TKCVVKLLDH FKHSGPNGQH VCMVFEYLGD NLLTLIKYSD YRGLPIPMVK EICYHMLVGL DYLHKQLSII HTDLKPENVL LPSTIDPSKD PRKSGAPLVL
201: PTDKDNTVVD SNGDFVKNQK TGSHRKAKLS AQGHAENKGN TESDKVRGVG SPVNGKQCAA EKSVEEDCPS TSDAIELDGS EKGKQGGKKG SRSSRRHLVA
301: SADLKCKLVD FGNACWTYKQ FTSDIQTRQY RCPEVILGSK YSTSADLWSF ACICFELVTG DVLFDPHSGD NYDRDEDHLA LMMELLGMMP RKIALGGRYS
401: RDFFNRHGDL RHIRRLRFWP MNKVLTEKYE FSEQDANDLS DFLVSILDFV PEKRPTAAQC LLHPWINSGP RSIKPSLKDE NSDKLDTEKN KRENEEQEAV
501: EVKMGNVVIS SLDSKPGMSQ SSSTLKLAI
101: TKCVVKLLDH FKHSGPNGQH VCMVFEYLGD NLLTLIKYSD YRGLPIPMVK EICYHMLVGL DYLHKQLSII HTDLKPENVL LPSTIDPSKD PRKSGAPLVL
201: PTDKDNTVVD SNGDFVKNQK TGSHRKAKLS AQGHAENKGN TESDKVRGVG SPVNGKQCAA EKSVEEDCPS TSDAIELDGS EKGKQGGKKG SRSSRRHLVA
301: SADLKCKLVD FGNACWTYKQ FTSDIQTRQY RCPEVILGSK YSTSADLWSF ACICFELVTG DVLFDPHSGD NYDRDEDHLA LMMELLGMMP RKIALGGRYS
401: RDFFNRHGDL RHIRRLRFWP MNKVLTEKYE FSEQDANDLS DFLVSILDFV PEKRPTAAQC LLHPWINSGP RSIKPSLKDE NSDKLDTEKN KRENEEQEAV
501: EVKMGNVVIS SLDSKPGMSQ SSSTLKLAI
Arabidopsis Description
SRPK4Ser/arg-rich protein kinase 4 [Source:UniProtKB/TrEMBL;Acc:F4J982]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.