Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Solyc10g085720.1.1 | Tomato | nucleus | 94.48 | 94.84 |
PGSC0003DMT400006951 | Potato | mitochondrion, nucleus | 78.1 | 74.95 |
VIT_08s0007g04220.t01 | Wine grape | nucleus | 72.38 | 68.22 |
KRH20002 | Soybean | nucleus | 66.29 | 67.05 |
KRH32624 | Soybean | nucleus | 69.52 | 66.73 |
AT3G53030.1 | Thale cress | nucleus | 66.86 | 66.35 |
PGSC0003DMT400018439 | Potato | nucleus | 66.86 | 64.29 |
CDX78145 | Canola | nucleus | 66.29 | 63.62 |
Bra006970.1-P | Field mustard | nucleus | 66.67 | 56.73 |
CDX73580 | Canola | nucleus | 66.67 | 55.2 |
PGSC0003DMT400003820 | Potato | cytosol | 46.1 | 54.26 |
PGSC0003DMT400045066 | Potato | cytosol | 46.29 | 54.24 |
PGSC0003DMT400079686 | Potato | cytosol | 17.14 | 31.25 |
PGSC0003DMT400069308 | Potato | golgi, vacuole | 19.43 | 28.02 |
PGSC0003DMT400061423 | Potato | nucleus | 22.48 | 27.38 |
PGSC0003DMT400030615 | Potato | nucleus | 21.9 | 26.81 |
PGSC0003DMT400046853 | Potato | cytosol | 20.95 | 25.46 |
PGSC0003DMT400043636 | Potato | cytosol | 20.57 | 16.51 |
PGSC0003DMT400053226 | Potato | mitochondrion | 20.95 | 13.16 |
PGSC0003DMT400033770 | Potato | mitochondrion | 23.05 | 11.67 |
PGSC0003DMT400069307 | Potato | nucleus | 2.29 | 1.37 |
PGSC0003DMT400079685 | Potato | nucleus | 2.1 | 1.26 |
PGSC0003DMT400068117 | Potato | nucleus | 0.19 | 0.24 |
Protein Annotations
EntrezGene:102588730 | MapMan:18.4.3.5 | Gene3D:3.30.200.20 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 |
GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 |
InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | UniProt:M1AFG6 | PFAM:PF00069 | EnsemblPlantsGene:PGSC0003DMG400008395 | PGSC:PGSC0003DMG400008395 |
EnsemblPlants:PGSC0003DMT400021639 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24055 | PANTHER:PTHR24055:SF228 |
InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI00029482B5 |
RefSeq:XP_015164578.1 | SEG:seg | : | : | : | : |
Description
Srpk [Source:PGSC_GENE;Acc:PGSC0003DMG400008395]
Coordinates
chr10:-:53110142..53115123
Molecular Weight (calculated)
59228.2 Da
IEP (calculated)
6.466
GRAVY (calculated)
-0.546
Length
525 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGFAEDQRL KEEEEMIEES SDDCTSEDEG TDDYRRGGYH AVRIGDTFKG GRYVVQSKLG WGHFSTVWLS WDTLMSQFVA LKVQKSAQHY TEAALDEITI
101: LKQIAEGDPE GGKSVVKLLD HFKHSGPNGQ HVCMVFEYLG DNLLSLIKYT GYRGLPIHMV KELCFHVLVG LDYLHRQLSI IHTDLKPENM LLCSTIDPSK
201: DPRKSGAPLI LPSNLDKASL ESGTVKGHVT FYANLTNNQK KVRRKSKETA QDFAGNTAVE SSQSNGDLPN DHLVGSANVD RLSNSDAATA SGKESVGPKK
301: GSGSRRRKTL ESVDLKCKLV DFGNACWTYK QFTDNIQTRQ YRCPEVILGS KYSTSADLWS FACICFELAT GDVLFDPHSG DNFDRDEDHL ALMMELLGTM
401: PRKIALGGRY SREFFNRHGD LRHIRRLRFW PLDKVLVEKY EFSEQDAKDM ADFLVPILDF DPEKRPTAAQ CLLHPWINTG PRNLEPRVPD ARSKATADTV
501: NFEQIKRDKE KKETMEVRMG NMAIV
101: LKQIAEGDPE GGKSVVKLLD HFKHSGPNGQ HVCMVFEYLG DNLLSLIKYT GYRGLPIHMV KELCFHVLVG LDYLHRQLSI IHTDLKPENM LLCSTIDPSK
201: DPRKSGAPLI LPSNLDKASL ESGTVKGHVT FYANLTNNQK KVRRKSKETA QDFAGNTAVE SSQSNGDLPN DHLVGSANVD RLSNSDAATA SGKESVGPKK
301: GSGSRRRKTL ESVDLKCKLV DFGNACWTYK QFTDNIQTRQ YRCPEVILGS KYSTSADLWS FACICFELAT GDVLFDPHSG DNFDRDEDHL ALMMELLGTM
401: PRKIALGGRY SREFFNRHGD LRHIRRLRFW PLDKVLVEKY EFSEQDAKDM ADFLVPILDF DPEKRPTAAQ CLLHPWINTG PRNLEPRVPD ARSKATADTV
501: NFEQIKRDKE KKETMEVRMG NMAIV
001: MEAEKWNSDG GEYTSEDEGT EDYRRGGYHA VRIGDSFKTG RYVVQSKLGW GHFSTVWLSW DTQSSRYVAL KVQKSAQHYT EAAMDEITIL QQIAEGDTDD
101: TKCVVKLLDH FKHSGPNGQH VCMVFEYLGD NLLTLIKYSD YRGLPIPMVK EICYHMLVGL DYLHKQLSII HTDLKPENVL LPSTIDPSKD PRKSGAPLVL
201: PTDKDNTVVD SNGDFVKNQK TGSHRKAKLS AQGHAENKGN TESDKVRGVG SPVNGKQCAA EKSVEEDCPS TSDAIELDGS EKGKQGGKKG SRSSRRHLVA
301: SADLKCKLVD FGNACWTYKQ FTSDIQTRQY RCPEVILGSK YSTSADLWSF ACICFELVTG DVLFDPHSGD NYDRDEDHLA LMMELLGMMP RKIALGGRYS
401: RDFFNRHGDL RHIRRLRFWP MNKVLTEKYE FSEQDANDLS DFLVSILDFV PEKRPTAAQC LLHPWINSGP RSIKPSLKDE NSDKLDTEKN KRENEEQEAV
501: EVKMGNVVIS SLDSKPGMSQ SSSTLKLAI
101: TKCVVKLLDH FKHSGPNGQH VCMVFEYLGD NLLTLIKYSD YRGLPIPMVK EICYHMLVGL DYLHKQLSII HTDLKPENVL LPSTIDPSKD PRKSGAPLVL
201: PTDKDNTVVD SNGDFVKNQK TGSHRKAKLS AQGHAENKGN TESDKVRGVG SPVNGKQCAA EKSVEEDCPS TSDAIELDGS EKGKQGGKKG SRSSRRHLVA
301: SADLKCKLVD FGNACWTYKQ FTSDIQTRQY RCPEVILGSK YSTSADLWSF ACICFELVTG DVLFDPHSGD NYDRDEDHLA LMMELLGMMP RKIALGGRYS
401: RDFFNRHGDL RHIRRLRFWP MNKVLTEKYE FSEQDANDLS DFLVSILDFV PEKRPTAAQC LLHPWINSGP RSIKPSLKDE NSDKLDTEKN KRENEEQEAV
501: EVKMGNVVIS SLDSKPGMSQ SSSTLKLAI
Arabidopsis Description
SRPK4Ser/arg-rich protein kinase 4 [Source:UniProtKB/TrEMBL;Acc:F4J982]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.