Factsheet for GSMUA_Achr8P04590_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P26710_001	Banana	cytosol	83.26	89.84
HORVU4Hr1G018630.1	Barley	cytosol, mitochondrion, nucleus, plastid	26.36	68.85
HORVU6Hr1G019910.4	Barley	cytosol	22.8	68.55
HORVU3Hr1G049750.1	Barley	mitochondrion	25.94	67.76
Zm00001d013273_P003	Maize	nucleus	78.87	66.84
EER93458	Sorghum	nucleus	77.82	65.61
TraesCS5B01G392200.1	Wheat	nucleus	76.78	65.3
TraesCS5D01G397000.1	Wheat	nucleus	76.57	65.12
TraesCS5A01G387100.1	Wheat	nucleus	76.36	64.95
HORVU5Hr1G094810.3	Barley	nucleus	75.73	64.53
VIT_08s0007g04220.t01	Wine grape	nucleus	74.48	63.91
VIT_06s0061g01050.t01	Wine grape	nucleus	73.01	63.69
Os03t0748400-01	Rice	nucleus	54.39	63.57
HORVU1Hr1G034750.1	Barley	cytosol	20.71	62.26
KRH26554	Soybean	nucleus	69.87	61.28
HORVU7Hr1G058230.1	Barley	cytosol	14.23	61.26
AT3G53030.1	Thale cress	nucleus	67.78	61.25
GSMUA_Achr4P11760_001	Banana	cytosol	47.28	61.08
KRH32624	Soybean	nucleus	69.67	60.88
KRH22757	Soybean	nucleus	69.46	60.81
Solyc10g085720.1.1	Tomato	nucleus	66.53	60.8
Bra020218.1-P	Field mustard	nucleus	66.11	60.19
AT3G44850.1	Thale cress	nucleus	66.53	59.55
KRH20002	Soybean	nucleus	64.44	59.34
CDY09171	Canola	nucleus	61.51	59.27
CDX78145	Canola	nucleus	67.78	59.23
Solyc06g074700.2.1	Tomato	nucleus	67.99	58.77
Zm00001d034010_P002	Maize	mitochondrion, nucleus	77.62	58.61
CDX92332	Canola	nucleus	65.69	58.58
Bra002433.1-P	Field mustard	nucleus	65.69	58.58
CDY26961	Canola	nucleus	65.48	58.29
Solyc09g008790.2.1	Tomato	cytosol	67.36	58.12
Solyc11g066650.1.1	Tomato	nucleus	70.29	58.03
AT5G22840.1	Thale cress	nucleus	65.27	57.99
HORVU2Hr1G091920.1	Barley	cytosol	36.61	57.76
HORVU7Hr1G090500.1	Barley	cytosol	35.36	57.09
GSMUA_Achr5P11070_001	Banana	cytosol	48.74	56.83
HORVU1Hr1G094650.1	Barley	nucleus	34.94	56.8
HORVU4Hr1G059640.3	Barley	golgi, mitochondrion, plasma membrane	41.84	55.4
HORVU3Hr1G021690.1	Barley	cytosol	28.66	55.24
GSMUA_Achr1P02800_001	Banana	cytosol	47.7	55.07
HORVU3Hr1G021740.1	Barley	cytosol	29.29	54.69
GSMUA_Achr2P11360_001	Banana	cytosol	50.21	54.3
HORVU2Hr1G066530.1	Barley	nucleus	44.77	52.97
Bra006970.1-P	Field mustard	nucleus	67.99	52.67
HORVU1Hr1G082710.1	Barley	nucleus, plastid	46.03	52.26
KRH25147	Soybean	mitochondrion	59.83	51.72
CDX73580	Canola	nucleus	68.2	51.42
HORVU7Hr1G121360.1	Barley	cytosol, mitochondrion, nucleus	35.36	50.9
HORVU6Hr1G081350.5	Barley	nucleus	37.03	49.03
HORVU5Hr1G046420.1	Barley	nucleus	26.36	48.46
GSMUA_Achr11P...	Banana	cytosol	19.25	31.83
GSMUA_Achr11P...	Banana	cytosol	22.38	31.56
GSMUA_Achr8P28600_001	Banana	cytosol	13.6	30.09
GSMUA_Achr5P29170_001	Banana	nucleus	24.27	26.61
GSMUA_Achr9P03190_001	Banana	nucleus	23.85	26.15
GSMUA_Achr8P04030_001	Banana	mitochondrion	24.27	25.22
GSMUA_Achr3P17160_001	Banana	cytosol	23.01	24.5
GSMUA_AchrUn_...	Banana	nucleus	24.9	16.71
GSMUA_Achr4P18950_001	Banana	nucleus	23.85	16.24
GSMUA_Achr10P...	Banana	nucleus	19.04	14.13
GSMUA_Achr8P14500_001	Banana	nucleus	26.15	12.97
GSMUA_Achr1P22430_001	Banana	mitochondrion	24.48	11.38
GSMUA_Achr3P02060_001	Banana	nucleus	23.22	11.17
GSMUA_Achr1P12470_001	Banana	nucleus	24.9	10.98
GSMUA_Achr11P...	Banana	nucleus	23.22	10.12
GSMUA_Achr2P21700_001	Banana	nucleus	23.22	9.99
GSMUA_Achr7P11320_001	Banana	nucleus	23.85	8.86
GSMUA_Achr11P...	Banana	nucleus	6.9	5.3
PGSC0003DMT400068117	Potato	nucleus	2.09	2.37

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.5	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr8G04590_001	EnsemblPlants:GSMUA_Achr8P04590_001	EnsemblPlants:GSMUA_Achr8T04590_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0TML2
PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24055	PANTHER:PTHR24055:SF228
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002954EF8
SEG:seg	:	:	:	:	:

Description

SRPK4, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G04590_001]

Coordinates

chr8:+:3050047..3054715

Molecular Weight (calculated)

53711.2 Da

IEP (calculated)

5.740

GRAVY (calculated)

-0.522

Length

478 amino acids

Sequence
(BLAST)

001: MAEEDGRSES SNYTSEDEGT EDYRRGGYHA VRVGDSFKQG AYIVQAKLGW GHFSTVWLAW DTVHSRYVAL KVQKSAQHYT EAAMDEIKIL KQIAEGDADD
101: TRCVVKLLDH FKHSGPNGNH VCMVFEFLGD NLLTLIKYTD YRGIPLSKVK EICRYVLIGL DYLHRDLSII HTDLKPENIL LKSSIDPNKD PLRSGAPLIL
201: KAKNAAAATS RSAATMAGDA DGSEDNGDSR VVNDCGGSGE THNLWCKIVD FGNACWTYKQ FTNDIQTRQY RCPEVILGSK YSTSADMWSF ACICFELATG
301: DVLFDPHSGD NFDRDEDHLA LMMELLGMMP RKIALGGRYS REFFNRYGDL RHIRRLRFWP LNKVLMEKYE FSEQDANDMA DFLVPILDFI PDKRPTACQL
401: LQHPWIDAGP RTQEPSLSVS NQNQSSKHGD SEKQKVEKDE REAMAVGLGN IAIDVSSNSV KEPQPNSKPT EANVTSSR

Best Arabidopsis Sequence Match ( AT3G53030.1 )
(BLAST)

001: MEAEKWNSDG GEYTSEDEGT EDYRRGGYHA VRIGDSFKTG RYVVQSKLGW GHFSTVWLSW DTQSSRYVAL KVQKSAQHYT EAAMDEITIL QQIAEGDTDD
101: TKCVVKLLDH FKHSGPNGQH VCMVFEYLGD NLLTLIKYSD YRGLPIPMVK EICYHMLVGL DYLHKQLSII HTDLKPENVL LPSTIDPSKD PRKSGAPLVL
201: PTDKDNTVVD SNGDFVKNQK TGSHRKAKLS AQGHAENKGN TESDKVRGVG SPVNGKQCAA EKSVEEDCPS TSDAIELDGS EKGKQGGKKG SRSSRRHLVA
301: SADLKCKLVD FGNACWTYKQ FTSDIQTRQY RCPEVILGSK YSTSADLWSF ACICFELVTG DVLFDPHSGD NYDRDEDHLA LMMELLGMMP RKIALGGRYS
401: RDFFNRHGDL RHIRRLRFWP MNKVLTEKYE FSEQDANDLS DFLVSILDFV PEKRPTAAQC LLHPWINSGP RSIKPSLKDE NSDKLDTEKN KRENEEQEAV
501: EVKMGNVVIS SLDSKPGMSQ SSSTLKLAI

Arabidopsis Description

SRPK4Ser/arg-rich protein kinase 4 [Source:UniProtKB/TrEMBL;Acc:F4J982]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.