Factsheet for VIT_06s0061g01050.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_08s0007g04220.t01	Wine grape	nucleus	77.19	75.94
GSMUA_Achr8P26710_001	Banana	cytosol	60.77	75.17
GSMUA_Achr8P04590_001	Banana	nucleus	63.69	73.01
HORVU4Hr1G018630.1	Barley	cytosol, mitochondrion, nucleus, plastid	22.99	68.85
HORVU7Hr1G058230.1	Barley	cytosol	13.69	67.57
Os03t0748400-01	Rice	nucleus	50.18	67.24
HORVU1Hr1G034750.1	Barley	cytosol	19.34	66.67
HORVU3Hr1G049750.1	Barley	mitochondrion	22.26	66.67
EER93458	Sorghum	nucleus	67.7	65.43
Zm00001d013273_P003	Maize	nucleus	67.34	65.43
TraesCS5D01G397000.1	Wheat	nucleus	66.79	65.12
TraesCS5B01G392200.1	Wheat	nucleus	66.79	65.12
TraesCS5A01G387100.1	Wheat	nucleus	66.79	65.12
HORVU5Hr1G094810.3	Barley	nucleus	66.61	65.06
HORVU6Hr1G019910.4	Barley	cytosol	18.8	64.78
HORVU2Hr1G091920.1	Barley	cytosol	33.76	61.06
HORVU1Hr1G094650.1	Barley	nucleus	32.3	60.2
HORVU3Hr1G021690.1	Barley	cytosol	27.19	60.08
HORVU7Hr1G090500.1	Barley	cytosol	32.3	59.8
HORVU3Hr1G021740.1	Barley	cytosol	27.55	58.98
HORVU4Hr1G059640.3	Barley	golgi, mitochondrion, plasma membrane	38.14	57.89
Zm00001d034010_P002	Maize	mitochondrion, nucleus	66.42	57.5
VIT_07s0031g02130.t01	Wine grape	cytosol	45.62	56.31
HORVU5Hr1G046420.1	Barley	nucleus	26.28	55.38
HORVU2Hr1G066530.1	Barley	nucleus	39.6	53.71
HORVU1Hr1G082710.1	Barley	nucleus, plastid	41.06	53.44
HORVU6Hr1G081350.5	Barley	nucleus	34.31	52.08
HORVU7Hr1G121360.1	Barley	cytosol, mitochondrion, nucleus	30.84	50.9
VIT_04s0008g04220.t01	Wine grape	nucleus	20.8	28.36
VIT_08s0040g02640.t01	Wine grape	nucleus	21.53	27.51
VIT_17s0000g09500.t01	Wine grape	nucleus	21.35	26.9
VIT_01s0137g00580.t01	Wine grape	nucleus	20.62	26.16
VIT_13s0067g00960.t01	Wine grape	cytosol	20.8	15.66
VIT_16s0039g00610.t01	Wine grape	plasma membrane, vacuole	22.08	13.31
VIT_01s0011g03350.t01	Wine grape	nucleus	21.9	11.01
VIT_01s0011g01590.t01	Wine grape	mitochondrion	20.44	6.18

Protein Annotations

EntrezGene:100260164	wikigene:100260164	MapMan:18.4.3.5	Gene3D:3.30.200.20	EMBL:AM462619	ProteinID:CAN79039
ProteinID:CAN79039.1	ProteinID:CCB44202	ProteinID:CCB44202.1	UniProt:F6GW67	EMBL:FN594957	GO:GO:0000166
GO:GO:0000245	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0006139	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0035556	GO:GO:0050684	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100260164	wikigene:LOC100260164
PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24055	PANTHER:PTHR24055:SF228
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TIGR:TC61263
UniParc:UPI0001983787	ArrayExpress:VIT_06s0061g01050	EnsemblPlantsGene:VIT_06s0061g01050	EnsemblPlants:VIT_06s0061g01050.t01	RefSeq:XP_002271598	RefSeq:XP_002271598.1
RefSeq:XP_003632258	RefSeq:XP_003632258.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6:+:18703315..18720531

Molecular Weight (calculated)

61974.1 Da

IEP (calculated)

6.790

GRAVY (calculated)

-0.699

Length

548 amino acids

Sequence
(BLAST)

001: MAEDRNGDLS EASDYTSEDE GTEDYRRGGY HAVRIGDTFK NGRYVVQAKL GWGHFSTVWL AWDTQKSKYV ALKVQKSAKH YTEAAMDEIT ILKQIAEGDP
101: DDKRCVVKLL DHFKHSGPNG QHVCMVFEYL GDNLLTLIKY ADYRGTPLHM VKEICFHILV GLDYLHHQLS IIHTDLKPEN VLLLSMIDPS KDPRKSGASL
201: ILPTSRDKIV SEPAASKDTK NMNGDLTKNQ KKKIRRKAKR AAQGCMGKEA SDDPELDAKA PDSEDSNNDA NSNGDSVEEQ QNSSVIKSSS VNTDDVKDVR
301: RENQGRRRGS RSTRQKLLAE VDLKCKLVDF GNACWTYKQF TNDIQTRQYR CPEVILGSKY STSADLWSFA CICFELVTGD VLFDPHSGDN YDRDEDHLAL
401: MMELLGMMPR KIALGGRYSR DFFNRYGDLR HIRRLRFWPL NKVLTEKYEF SEQDANDIAD FLVPILDFVP EKRPTAAQCL THPWINAGPR LREPSIASLP
501: KATDGGVSEK RERDEREAME VGVGNIAIDG PSKSDKEPQS IQKLQKQS

Best Arabidopsis Sequence Match ( AT3G44850.1 )
(BLAST)

001: MAEDKNNGRV NDESEYSSED EGTEDYKKGG YHTVRVGDTF KNGAYVIQSK LGWGHFSTVW LAWDTQESRY VALKVQKSAQ HYTEAAMDEI KILKQIAEGD
101: SGDKKCVVKL LDHFKHTGPN GKHVCMVFEY LGDNLLSVIK YSDYRGVPLH MVKELCFHIL VGLDYLHREL SIIHTDLKPE NVLLLSTIDP SRDVRRSGVP
201: LVLPITKDKI VSESAVKPET KSYTYNGDLT KNQKKKIRKK AKKVVAQDFG GEEALEESER DSNSEARING NSTVERSEGS STRLMEGEEA REKANKKNGR
301: GSRRGSRSTR QKLLSDIECK CKLVDFGNAC WTYKQFTSDI QTRQYRCPEV VLGSKYSTSA DMWSFACICF ELATGDVLFD PHSGENYDRD EDHLALMMEL
401: LGMMPRKIAL GGRYSRDFFN RQGELRHIRR LRFWPISKVL KEKYDFSEQD AKDMSDFLVT ILEFVPEKRP TAAQCLKHPW FNPGPRLLEP SLKPQQPKGE
501: EEGAANENIE KEKDEREAME AGVGNIAIDV SEPK

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FYC5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.