Factsheet for GSMUA_Achr11P26590_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr4P09230_001
GSMUA_Achr8P24800_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G24740.1	GSMUA_Achr4P09230_001	AT4G31580.1	10593939
AT4G24740.1	GSMUA_Achr8P24800_001	AT4G31580.1	10593939

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P28600_001	Banana	cytosol	49.56	77.78
KRH54290	Soybean	cytosol, nucleus	83.19	66.35
VIT_17s0000g09500.t01	Wine grape	nucleus	84.66	65.98
KRH63654	Soybean	nucleus	82.6	65.88
VIT_01s0137g00580.t01	Wine grape	nucleus	83.48	65.51
KRH57157	Soybean	cytosol	82.6	65.12
PGSC0003DMT400046853	Potato	cytosol	82.89	65.05
PGSC0003DMT400030615	Potato	nucleus	81.42	64.34
Solyc05g013770.2.1	Tomato	nucleus	81.12	63.81
TraesCS5D01G378900.2	Wheat	cytosol, mitochondrion	79.06	63.21
TraesCS5B01G371800.1	Wheat	cytosol	79.06	63.21
TraesCS5A01G369500.2	Wheat	cytosol	79.06	63.21
HORVU5Hr1G091970.12	Barley	cytosol, mitochondrion	78.76	62.97
KXG35096	Sorghum	cytosol	78.47	62.74
AT4G24740.1	Thale cress	nucleus	78.47	62.3
GSMUA_Achr9P03190_001	Banana	nucleus	79.94	62.16
Solyc03g112050.2.1	Tomato	cytosol	69.91	61.08
GSMUA_Achr5P29170_001	Banana	nucleus	78.47	61.01
Zm00001d005361_P007	Maize	cytosol, plastid	75.81	60.9
KRH03872	Soybean	nucleus	83.78	60.17
GSMUA_Achr3P17160_001	Banana	cytosol	77.88	58.8
GSMUA_Achr8P04030_001	Banana	mitochondrion	72.57	53.48
CDY34307	Canola	plastid	78.76	36.73
CDY03422	Canola	plastid	78.47	36.59
Bra013829.1-P	Field mustard	nucleus	75.22	35.61
GSMUA_Achr11P...	Banana	cytosol	24.78	29.07
GSMUA_Achr4P11760_001	Banana	cytosol	29.5	27.03
GSMUA_Achr5P11070_001	Banana	cytosol	29.79	24.63
GSMUA_Achr2P11360_001	Banana	cytosol	30.97	23.76
GSMUA_Achr1P02800_001	Banana	cytosol	28.91	23.67
GSMUA_Achr8P26710_001	Banana	cytosol	30.38	23.25
GSMUA_Achr8P04590_001	Banana	nucleus	31.56	22.38
GSMUA_AchrUn_...	Banana	nucleus	30.68	14.61
GSMUA_Achr4P18950_001	Banana	nucleus	27.14	13.11
GSMUA_Achr10P...	Banana	nucleus	22.12	11.65
GSMUA_Achr8P14500_001	Banana	nucleus	30.97	10.89
GSMUA_Achr3P02060_001	Banana	nucleus	29.79	10.16
GSMUA_Achr1P22430_001	Banana	mitochondrion	29.2	9.63
GSMUA_Achr2P21700_001	Banana	nucleus	30.09	9.18
GSMUA_Achr11P...	Banana	nucleus	29.5	9.12
GSMUA_Achr1P12470_001	Banana	nucleus	28.91	9.04
GSMUA_Achr7P11320_001	Banana	nucleus	29.79	7.85
GSMUA_Achr11P...	Banana	nucleus	7.08	3.85
CDY03423	Canola	cytosol, peroxisome, plastid	1.47	1.6
Bra013830.1-P	Field mustard	plastid	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.2	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr11G26590_001	EnsemblPlants:GSMUA_Achr11P26590_001	EnsemblPlants:GSMUA_Achr11T26590_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0RVN9
PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24058	PANTHER:PTHR24058:SF52
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000295BC8E

Description

Serine/threonine-protein kinase AFC2 [Source:GMGC_GENE;Acc:GSMUA_Achr11G26590_001]

Coordinates

chr11:+:25376637..25379621

Molecular Weight (calculated)

39376.8 Da

IEP (calculated)

9.196

GRAVY (calculated)

-0.388

Length

339 amino acids

Sequence
(BLAST)

001: MFAVGENLTS RYKIYSKIGE GTFGQVLECW DREKKEMVAI KIVRSIKKYR EAAMIEVDVL QHLGKHDKTG NRCVQIRNWF DYRNHICIVF EKLGPSLYDF
101: LRKNAYRPFP IDLVREIGRQ LLESVAFMHD LHLIHTDLKP ENILFVSPEY IKVSEYKDGS FSKRLPKSSA IKLIDLGSAT YDRKDHTYIV STRHYRAPEV
201: ILGLGWSYPC DMWSVGCILV ELCSGEALFQ THENLEHMAM MERVLGPLPQ NMLKRADRHA EKYVRRGRLN WPEGAASRES IKAVQKLPRL QNIVMQHVDH
301: SAGDAIDLLQ GLLRYEPSER MTALEALGHP FFTKNRHRY

Best Arabidopsis Sequence Match ( AT4G24740.7 )
(BLAST)

001: MFCGQEIGNI SSFASSGAPS DNSSSLCVKG VARNGSPPWR EDDKDGHYIF ELGDDLTPRY KIYSKMGEGT FGQVLECWDR ERKEMVAVKI VRGVKKYREA
101: AMIEIEMLQQ LGKHDKGGNR CVQIRNWFDY RNHICIVFEK LGSSLYDFLR KNNYRSFPID LVREIGWQLL ECVAFMHDLR MIHTDLKPEN ILLVSSDYVK
201: IPEYKGSRLQ RDVCYKRVPK SSAIKVIDFG STTYERQDQT YIVSTRHYRA PEVILGLGWS YPCDVWSVGC IIVELCTGEA LFQTHENLEH LAMMERVLGP
301: FPQQMLKKVD RHSEKYVRRG RLDWPDGATS RDSLKAVLKL PRLQNLIMQH VDHSAGELIN MVQGLLRFDP SERITAREAL RHPFFARRR

Arabidopsis Description

AFC2At4g24740 [Source:UniProtKB/TrEMBL;Acc:Q1EBU3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.