Factsheet for Zm00001d005361_P007

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

mitochondrion 3
cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d004066_P001
Zm00001d017177_P007
Zm00001d018341_P007
Zm00001d028789_P001
Zm00001d045076_P001
Zm00001d045330_P001
Zm00001d051052_P001
Zm00001d052062_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G24740.1	Zm00001d004066_P001	AT4G31580.1	10593939
AT4G24740.1	Zm00001d017177_P007	AT4G31580.1	10593939
AT4G24740.1	Zm00001d018341_P007	AT4G31580.1	10593939
AT4G24740.1	Zm00001d028789_P001	AT4G31580.1	10593939
AT4G24740.1	Zm00001d045076_P001	AT4G31580.1	10593939
AT4G24740.1	Zm00001d045330_P001	AT4G31580.1	10593939
AT4G24740.1	Zm00001d051052_P001	AT4G31580.1	10593939
AT4G24740.1	Zm00001d052062_P002	AT4G31580.1	10593939

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG35096	Sorghum	cytosol	93.6	93.16
TraesCS5A01G369500.2	Wheat	cytosol	82.7	82.31
HORVU5Hr1G091970.12	Barley	cytosol, mitochondrion	82.7	82.31
TraesCS5D01G378900.2	Wheat	cytosol, mitochondrion	82.46	82.08
TraesCS5B01G371800.1	Wheat	cytosol	82.46	82.08
GSMUA_Achr11P...	Banana	cytosol	60.9	75.81
VIT_17s0000g09500.t01	Wine grape	nucleus	72.04	69.89
KRH57157	Soybean	cytosol	68.96	67.67
KRH54290	Soybean	cytosol, nucleus	67.77	67.29
KRH63654	Soybean	nucleus	67.77	67.29
PGSC0003DMT400046853	Potato	cytosol	68.48	66.9
AT4G24740.1	Thale cress	nucleus	67.3	66.51
VIT_01s0137g00580.t01	Wine grape	nucleus	68.01	66.44
Solyc03g112050.2.1	Tomato	cytosol	60.9	66.24
PGSC0003DMT400030615	Potato	nucleus	65.4	64.34
Solyc05g013770.2.1	Tomato	nucleus	65.64	64.27
KRH03872	Soybean	nucleus	69.43	62.08
Zm00001d050970_P003	Maize	cytosol	65.4	61.88
Zm00001d042938_P003	Maize	cytosol	65.64	61.83
Zm00001d017096_P005	Maize	cytosol	64.93	61.57
Zm00001d044338_P003	Maize	mitochondrion	53.79	57.91
Zm00001d011258_P001	Maize	cytosol, nucleus, plasma membrane	46.68	49.75
CDY34307	Canola	plastid	67.3	39.06
CDY03422	Canola	plastid	67.06	38.93
Bra013829.1-P	Field mustard	nucleus	65.17	38.41
Zm00001d006308_P001	Maize	plastid	26.78	26.65
Zm00001d013273_P003	Maize	nucleus	26.07	19.5
Zm00001d034010_P002	Maize	mitochondrion, nucleus	26.54	17.69
Zm00001d010578_P003	Maize	cytosol, plastid	27.01	16.12
Zm00001d042979_P007	Maize	nucleus	28.2	16.04
Zm00001d021342_P017	Maize	cytosol	26.54	15.34
Zm00001d006355_P011	Maize	cytosol	27.01	14.45
Zm00001d012452_P004	Maize	nucleus	26.54	14.38
Zm00001d031231_P057	Maize	nucleus	27.25	11.88
Zm00001d002418_P030	Maize	nucleus, plastid	25.12	11.56
Zm00001d017754_P031	Maize	nucleus, plastid	24.64	11.05
Zm00001d013405_P004	Maize	nucleus	29.38	11.03
Zm00001d041183_P004	Maize	nucleus	27.25	11.0
Zm00001d033798_P030	Maize	mitochondrion	29.15	10.62
Zm00001d026246_P001	Maize	cytosol	22.99	10.57
CDY03423	Canola	cytosol, peroxisome, plastid	1.18	1.6
Bra013830.1-P	Field mustard	plastid	0.47	0.68

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100501620	MapMan:18.4.3.2	Gene3D:3.30.200.20	EMBL:BT085786	UniProt:C4J4N9
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	ProteinID:ONM20914.1
PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24058	PANTHER:PTHR24058:SF52	InterPro:Prot_kinase_dom
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A4C7F6	EnsemblPlantsGene:Zm00001d005361	EnsemblPlants:Zm00001d005361_P007
EnsemblPlants:Zm00001d005361_T007	:	:	:	:	:

Description

Serine/threonine-protein kinase AFC2

Coordinates

chr2:+:171059897..171064674

Molecular Weight (calculated)

47580.3 Da

IEP (calculated)

8.601

GRAVY (calculated)

-0.255

Length

422 amino acids

Sequence
(BLAST)

001: MATKYAAAAA DLVTGRPRKR ARLGWDVASA AEAQIGTFCG QEVGDVASLL LSANPSDHTC SSLLPKGVAR NASPPWREDD KDGHYVFAVG ENLASRYKIY
101: RKMGEGTFGQ VLECWDRESK EMVAIKIVRS VKKYSDAAMI EIDVLQKLAK NDAAGKHCVQ IRNWFDYRSH ICIVCEKLGP SLYDFLQKTG FHPFPIDLIR
201: RIGQQLLESV AFMHRLQLIH TDLKPENILL VSSDYVKLPD PKDGSFSRKL PKSSAIKLID FGSAAYHHQD RSYIVSTRHY RAPEVILGHG WSYPCDIWSV
301: GCILVELCSG ETLFQTHDNL EHLAMMDRVL GPLPRHMLER ADQHAEKYVR KGGLNWPQAI TTVESVRAVL KLPRLQNLVM QHVDHSAGDF IDLLKRLLAY
401: EPSGRLTAQE ALGHVFFTRY RQ

Best Arabidopsis Sequence Match ( AT3G53570.1 )
(BLAST)

001: MQSSVYRDKA SSIAMILETQ RNVEFPHRIV DKRPRKRPRL TWDAAPPLLP PPPPPTVFQP PLYYGPEFAS GLVPNFVYPN MFYNGLPRQG SPPWRPDDKD
101: GHYVFVVGDT LTPRYQILSK MGEGTFGQVL ECFDNKNKEV VAIKVIRSIN KYREAAMIEI DVLQRLTRHD VGGSRCVQIR NWFDYRNHIC IVFEKLGPSL
201: YDFLRKNSYR SFPIDLVREL GRQLLESVAY MHDLRLIHTD LKPENILLVS SEYIKIPDYK FLSRPTKDGS YFKNLPKSSA IKLIDFGSTT FEHQDHNYIV
301: STRHYRAPEV ILGVGWNYPC DLWSIGCILV ELCSGEALFQ THENLEHLAM MERVLGPLPP HMVLRADRRS EKYFRRGAKL DWPEGATSRD SLKAVWKLPR
401: LPNLIMQHVD HSAGDLIDLL QGLLRYDPTE RFKAREALNH PFFTRSREQS IPPFNPNPHP FLYNQKN

Arabidopsis Description

AFC1AT3G53570 protein [Source:UniProtKB/TrEMBL;Acc:B9DH08]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.