Factsheet for Zm00001d050970_P003

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d004066_P001
Zm00001d017177_P007
Zm00001d018341_P007
Zm00001d028789_P001
Zm00001d045076_P001
Zm00001d045330_P001
Zm00001d051052_P001
Zm00001d052062_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G24740.1	Zm00001d004066_P001	AT4G31580.1	10593939
AT4G24740.1	Zm00001d017177_P007	AT4G31580.1	10593939
AT4G24740.1	Zm00001d018341_P007	AT4G31580.1	10593939
AT4G24740.1	Zm00001d028789_P001	AT4G31580.1	10593939
AT4G24740.1	Zm00001d045076_P001	AT4G31580.1	10593939
AT4G24740.1	Zm00001d045330_P001	AT4G31580.1	10593939
AT4G24740.1	Zm00001d051052_P001	AT4G31580.1	10593939
AT4G24740.1	Zm00001d052062_P002	AT4G31580.1	10593939

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG30551	Sorghum	cytosol	93.72	93.72
Zm00001d017096_P005	Maize	cytosol	91.48	91.69
Os12t0460800-03	Rice	cytosol	36.77	87.23
TraesCS6A01G210100.1	Wheat	cytosol	80.72	83.72
TraesCS6D01G193300.1	Wheat	cytosol	80.49	83.49
TraesCS6B01G238900.1	Wheat	cytosol	80.49	83.49
GSMUA_Achr8P28600_001	Banana	cytosol	39.69	81.94
HORVU6Hr1G053760.52	Barley	cytosol	76.46	78.21
VIT_17s0000g09500.t01	Wine grape	nucleus	71.97	73.79
PGSC0003DMT400046853	Potato	cytosol	71.08	73.38
KRH57157	Soybean	cytosol	69.96	72.56
KRH63654	Soybean	nucleus	68.61	72.0
KRH54290	Soybean	cytosol, nucleus	68.16	71.53
Solyc03g112050.2.1	Tomato	cytosol	61.66	70.88
VIT_01s0137g00580.t01	Wine grape	nucleus	67.94	70.14
AT4G24740.1	Thale cress	nucleus	66.59	69.56
GSMUA_Achr3P17160_001	Banana	cytosol	68.16	67.71
Solyc05g013770.2.1	Tomato	nucleus	64.8	67.05
PGSC0003DMT400030615	Potato	nucleus	64.35	66.9
KRH03872	Soybean	nucleus	70.4	66.53
Zm00001d005361_P007	Maize	cytosol, plastid	61.88	65.4
Zm00001d042938_P003	Maize	cytosol	65.7	65.4
Zm00001d044338_P003	Maize	mitochondrion	51.79	58.93
Zm00001d011258_P001	Maize	cytosol, nucleus, plasma membrane	45.74	51.52
CDY34307	Canola	plastid	66.82	40.99
CDY03422	Canola	plastid	66.59	40.85
Bra013829.1-P	Field mustard	nucleus	63.9	39.8
Zm00001d006308_P001	Maize	plastid	24.22	25.47
Zm00001d013273_P003	Maize	nucleus	24.44	19.33
Zm00001d034010_P002	Maize	mitochondrion, nucleus	24.66	17.38
Zm00001d010578_P003	Maize	cytosol, plastid	26.01	16.41
Zm00001d042979_P007	Maize	nucleus	25.78	15.5
Zm00001d021342_P017	Maize	cytosol	25.34	15.48
Zm00001d006355_P011	Maize	cytosol	25.78	14.58
Zm00001d012452_P004	Maize	nucleus	23.77	13.61
Zm00001d002418_P030	Maize	nucleus, plastid	24.89	12.1
Zm00001d031231_P057	Maize	nucleus	25.56	11.78
Zm00001d017754_P031	Maize	nucleus, plastid	24.44	11.58
Zm00001d013405_P004	Maize	nucleus	28.7	11.39
Zm00001d026246_P001	Maize	cytosol	23.09	11.22
Zm00001d041183_P004	Maize	nucleus	26.23	11.2
Zm00001d033798_P030	Maize	mitochondrion	28.48	10.97
CDY03423	Canola	cytosol, peroxisome, plastid	1.79	2.56
Bra013830.1-P	Field mustard	plastid	0.45	0.68

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.2	Gene3D:3.30.200.20	UniProt:A0A1D6Q466	ProteinID:AQK53386.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24058	PANTHER:PTHR24058:SF99	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI00084459D9	EnsemblPlantsGene:Zm00001d050970	EnsemblPlants:Zm00001d050970_P003	EnsemblPlants:Zm00001d050970_T003	:

Description

Serine/threonine-protein kinase AFC2

Coordinates

chr4:-:134314763..134318362

Molecular Weight (calculated)

51029.6 Da

IEP (calculated)

8.452

GRAVY (calculated)

-0.388

Length

446 amino acids

Sequence
(BLAST)

001: MECVTDMPLA TLDSRPRKRQ RLGWDVVPAE MYQVTRPRLG WDVGPAEMNQ FALCGQEVVN AFSAAVLGLS SGCVSSQVNQ EQPHDGSPPL REDDKNGHYV
101: FAVGDNLTSR YKINAKMGEG TFGQVLECWD KETKEMVAIK IIRGIKKYRD AAMIEIGMLE KLGKYGESRS SCVQIRNWFD YRNHICIVFE RLGPSLYDFL
201: RKNNYRSFPI ALVREFAKQL LECIAFMHEL RLIHTDLKPE NILLVSPEYI KVPDYKVSSQ SPKEGSYYKQ LPKSSAIKVI DFGSTTYDQH DQSYVVSTRH
301: YRAPEVILGH GWSYPCDIWS VGCILVELCT GEALFQTHEN LEHLAMMERV LGPLPYHMLK RADRHSDKYI RKGRLNWPEG CTSRESMKAV MKLSRLQNLV
401: MQNVDQAAGD FIGLLQGLLK YDPASRLTAR EALRHPFFTE GFGRRR

Best Arabidopsis Sequence Match ( AT4G24740.1 )
(BLAST)

001: MEMERVHEFP HTHMDRRPRK RARLGWDVLP QATKAQVGMF CGQEIGNISS FASSGAPSDN SSSLCVKGVA RNGSPPWRED DKDGHYIFEL GDDLTPRYKI
101: YSKMGEGTFG QVLECWDRER KEMVAVKIVR GVKKYREAAM IEIEMLQQLG KHDKGGNRCV QIRNWFDYRN HICIVFEKLG SSLYDFLRKN NYRSFPIDLV
201: REIGWQLLEC VAFMHDLRMI HTDLKPENIL LVSSDYVKIP EYKGSRLQRD VCYKRVPKSS AIKVIDFGST TYERQDQTYI VSTRHYRAPE VILGLGWSYP
301: CDVWSVGCII VELCTGEALF QTHENLEHLA MMERVLGPFP QQMLKKVDRH SEKYVRRGRL DWPDGATSRD SLKAVLKLPR LQNLIMQHVD HSAGELINMV
401: QGLLRFDPSE RITAREALRH PFFARRR

Arabidopsis Description

AFC2At4g24740 [Source:UniProtKB/TrEMBL;Acc:Q1EBU3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.