Factsheet for Os01t0590900-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

nucleus: 19621931

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0155600-01
Os03t0107500-00
Os03t0270200-01
Os03t0285900-01
Os05t0120100-01
Os05t0162600-01
Os07t0499800-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G32660.1	Os03t0107500-00	AT1G30860.1	21798944
AT4G32660.1	Os07t0499800-01	AT1G30860.1	21798944
AT4G32660.1	Os03t0270200-01	AT2G29210.1	21798944
AT4G32660.1	Os01t0155600-01	AT2G37340.1	21798944
AT4G32660.1	Os03t0285900-01	AT2G37340.1	21798944
AT4G32660.1	Os05t0120100-01	AT2G37340.1	21798944
AT4G32660.1	Os05t0162600-01	AT2G37340.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G214800.2	Wheat	cytosol	92.27	92.27
TraesCS3B01G242600.2	Wheat	cytosol	92.27	92.27
TraesCS3A01G212200.2	Wheat	cytosol	92.01	92.01
EES00987	Sorghum	mitochondrion	90.46	90.93
HORVU3Hr1G051340.19	Barley	golgi, plasma membrane, plastid	92.53	85.48
Zm00001d044338_P003	Maize	mitochondrion	85.57	84.69
KRH61991	Soybean	cytosol	63.14	74.92
VIT_04s0008g04220.t01	Wine grape	nucleus	77.58	74.88
KRH52649	Soybean	nucleus	77.06	74.19
AT4G32660.1	Thale cress	nucleus	72.16	70.0
CDX68873	Canola	nucleus	71.13	69.17
Bra011368.1-P	Field mustard	nucleus	70.88	69.1
CDX75268	Canola	nucleus	70.88	69.1
GSMUA_Achr8P04030_001	Banana	mitochondrion	81.7	68.91
Zm00001d011258_P001	Maize	cytosol, nucleus, plasma membrane	69.85	68.43
KRG94066	Soybean	cytosol	21.91	64.39
Os12t0460800-03	Rice	cytosol	30.67	63.3
Os01t0837900-01	Rice	nucleus	68.04	60.83
Os12t0640800-01	Rice	mitochondrion	17.27	29.52
Os09t0552300-01	Rice	cytosol	28.61	26.37
Os03t0748400-01	Rice	nucleus	25.26	23.96
Os05t0466900-01	Rice	cytosol, nucleus	26.03	16.69
Os03t0719500-02	Rice	cytosol, nucleus	25.52	14.73
Os01t0832900-01	Rice	nucleus	26.55	14.13
Os04t0602800-01	Rice	nucleus	29.64	12.45
Os02t0702500-01	Rice	cytosol, nucleus, plastid	28.61	11.82
Os03t0710100-01	Rice	nucleus	20.1	9.82
Os07t0472400-01	Rice	plasma membrane	13.66	9.76

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.2	Gene3D:3.30.200.20	EntrezGene:4326374	EMBL:AK066167	ProteinID:BAD52695.1
ProteinID:BAS72950.1	ProteinID:EEE54903.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0046777
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EnsemblPlantsGene:Os01g0590900	EnsemblPlants:Os01t0590900-01	PFAM:PF00069	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24058	PANTHER:PTHR24058:SF44	InterPro:Prot_kinase_dom	UniProt:Q5ZD29	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0000446AFB	RefSeq:XP_015618954.1	SEG:seg	:

Description

Similar to Serine/threonine-protein kinase AFC3. (Os01t0590900-01)

Coordinates

chr1:+:23090754..23095161

Molecular Weight (calculated)

44789.7 Da

IEP (calculated)

8.794

GRAVY (calculated)

-0.472

Length

388 amino acids

Sequence
(BLAST)

001: MESSRSRKRA RQDWDGAGAP PPPAERAVVA RGGASPPWRD DDRDGHYVFD LGENLNRRYK ILSKMGEGTF GRVLECWDRE THEYVAIKVV RSIRKYRDAA
101: MIEIDVLNRL AENERYRSLC VQIQGWFDYR NHICIVFEKL GPSLYDFLKR NRYQPFPVEL VREFGRQLLE SVAYMHELRL IHTDLKPENI LLVSSEYIRV
201: PGSKKNSQDE MHFKCLPKSS AIKLIDFGST AFDNQEHSSI VSTRHYRAPE IILGLGWSFP CDLWSVGCII VELCSGEALF QTHENLEHLA MMERVLGPLP
301: EHMIRKASSS AQKYFRRGAR LNWPEGAVSR ESIRAVKKLD RLKDLVARKA DHSRAVLADL LYGLLKFEPS ERLTAQEALD HPFFRNTT

Best Arabidopsis Sequence Match ( AT4G32660.3 )
(BLAST)

001: MDKERVRKRP RMTWDEAPAE PEAKRAVIKG HGSDGRILSP PLRDDDRDGH YVFSLRDNLT PRYKILSKMG EGTFGRVLEC WDRDTKEYVA IKIIRSIKKY
101: RDAAMIEIDV LQKLVKSDKG RTRCVQMKNW FDYRNHICIV FEKLGPSLFD FLKRNKYSAF PLALVRDFGC QLLESVAYMH ELQLVHTDLK PENILLVSSE
201: NVKLPDNKRS AANETHFRCL PKSSAIKLID FGSTVCDNRI HHSIVQTRHY RSPEVILGLG WSYQCDLWSI GCILFELCTG EALFQTHDNL EHLAMMERAL
301: GPLPEHMTRK ASRGAEKYFR RGCRLNWPEG ANSRESIRAV KRLDRLKDMV SKHVDNTRSR FADLLYGLLA YDPSERLTAN EALDHPFFKS SS

Arabidopsis Description

AFC3At4g32660 [Source:UniProtKB/TrEMBL;Acc:A1L4Y9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.