Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG30263 | Sorghum | mitochondrion | 80.66 | 71.06 |
| Os02t0506100-00 | Rice | plastid | 37.23 | 46.79 |
| TraesCS7B01G035800.1 | Wheat | nucleus | 41.79 | 39.62 |
| TraesCS7D01G134000.1 | Wheat | nucleus | 41.61 | 39.38 |
| TraesCS7A01G134600.1 | Wheat | nucleus | 41.42 | 39.21 |
| Zm00001d003996_P001 | Maize | nucleus | 37.59 | 36.2 |
| Zm00001d025208_P002 | Maize | nucleus | 38.69 | 36.18 |
| Solyc06g074190.2.1 | Tomato | nucleus | 23.54 | 23.8 |
| VIT_06s0080g00930.t01 | Wine grape | plastid | 28.1 | 23.62 |
| PGSC0003DMT400067737 | Potato | nucleus | 24.27 | 23.29 |
| PGSC0003DMT400015076 | Potato | nucleus | 23.91 | 23.02 |
| Bra001412.1-P | Field mustard | nucleus | 13.87 | 21.9 |
| GSMUA_Achr6P16290_001 | Banana | nucleus | 24.64 | 21.88 |
| CDX70996 | Canola | nucleus | 18.61 | 21.47 |
| Solyc11g068720.1.1 | Tomato | nucleus | 24.82 | 21.45 |
| Bra006620.1-P | Field mustard | nucleus | 17.34 | 21.06 |
| KRH30384 | Soybean | plastid | 25.36 | 21.0 |
| CDX88802 | Canola | nucleus | 17.88 | 20.94 |
| Bra002404.1-P | Field mustard | nucleus | 18.43 | 20.87 |
| CDX92367 | Canola | mitochondrion, plastid | 18.25 | 20.83 |
| AT5G22310.1 | Thale cress | nucleus | 18.25 | 20.79 |
| KRH25284 | Soybean | plastid | 25.0 | 20.79 |
| Solyc10g083190.1.1 | Tomato | plastid | 25.0 | 20.73 |
| PGSC0003DMT400072353 | Potato | plastid | 24.45 | 20.46 |
| Bra034827.1-P | Field mustard | plastid | 22.81 | 20.36 |
| CDY01038 | Canola | plastid | 22.63 | 20.33 |
| CDY08511 | Canola | plastid | 22.81 | 20.33 |
| AT3G11590.1 | Thale cress | plastid | 22.81 | 20.1 |
| VIT_08s0007g02790.t01 | Wine grape | plastid | 24.09 | 20.06 |
| KRH67971 | Soybean | plastid | 24.09 | 20.0 |
| CDY67997 | Canola | mitochondrion, plastid | 17.15 | 19.96 |
| KRG96225 | Soybean | nucleus | 23.72 | 19.85 |
| CDX73866 | Canola | cytosol | 13.32 | 19.78 |
| CDY56601 | Canola | cytosol, golgi, plastid | 13.14 | 19.51 |
| Zm00001d018609_P001 | Maize | mitochondrion, plastid | 20.07 | 18.71 |
| Zm00001d012593_P001 | Maize | plastid | 19.34 | 17.7 |
| GSMUA_Achr6P08260_001 | Banana | nucleus | 18.07 | 17.28 |
| Zm00001d043218_P001 | Maize | plastid | 19.89 | 16.2 |
| Zm00001d026344_P001 | Maize | plastid | 20.26 | 16.16 |
| Zm00001d038595_P001 | Maize | nucleus, plastid | 19.34 | 15.73 |
| Zm00001d002252_P001 | Maize | plastid | 18.98 | 15.16 |
| Zm00001d053356_P002 | Maize | nucleus | 15.51 | 13.41 |
| Zm00001d037050_P001 | Maize | nucleus | 15.51 | 12.84 |
| Zm00001d000005_P002 | Maize | plastid | 15.69 | 12.48 |
Protein Annotations
| EnsemblPlants:Zm00001d000402_P001 | EnsemblPlants:Zm00001d000402_T001 | EnsemblPlantsGene:Zm00001d000402 | ncoils:Coil | PANTHER:PTHR31071 | PANTHER:PTHR31071:SF16 |
| SEG:seg | UniParc:UPI0004DE7FC0 | UniProt:A0A1X7YIP0 | MapMan:35.2 | : | : |
Description
myosin heavy chain-related
Coordinates
chrB73V4_ctg28:-:4355..7015
Molecular Weight (calculated)
60547.9 Da
IEP (calculated)
4.755
GRAVY (calculated)
-0.943
Length
548 amino acids
Sequence
(BLAST)
(BLAST)
001: MTWEPSWNNR RHHRHADFDA DVDARSAASA RNLASAFEED LEEEGDVGWD AAAKRRSCSD HRCSASVELS KLSRRKTRAF KDGDGGRSWH NGRAHGHCFS
101: DASAITSGGG GSVGGRTPAR QGDNRTEQMQ ELYNSLTASN ELVRVLANVL GPAGALNPTA ASVLAALRSE LDAARQLVKQ QRRRGVDGEE RLLRRQLAEE
201: VRAWKCRHRE KAAAAARLVA SELDGERRAR RRAERVGTKL AEALAGAEAS LRAATRELGL ERAARARLEK VCDELASRDV GGGTEAEAED DDGLRREAAA
301: TALEELERER EMLQVADELR EERVRMKLAE ARLHFEEKNA AVDRLRQELE AFLGNERREQ TPAHHEMAKE EEEEDHQLQI VLASEFGVHG IDPLVTEKSG
401: QEENAEAGDD DDDSEGSDIE LNMDGNSWSY TTTSRSRDTT AKNATSAHGS LSDRATECGA DAGAFDRRSE ATRDAPEQDW AADGCSDGGT TGRDEDEDAE
501: RYEAIKNLRE QMLTGHAFLF LSKGEADDDS DRRRRGFASH FEEDGDLW
101: DASAITSGGG GSVGGRTPAR QGDNRTEQMQ ELYNSLTASN ELVRVLANVL GPAGALNPTA ASVLAALRSE LDAARQLVKQ QRRRGVDGEE RLLRRQLAEE
201: VRAWKCRHRE KAAAAARLVA SELDGERRAR RRAERVGTKL AEALAGAEAS LRAATRELGL ERAARARLEK VCDELASRDV GGGTEAEAED DDGLRREAAA
301: TALEELERER EMLQVADELR EERVRMKLAE ARLHFEEKNA AVDRLRQELE AFLGNERREQ TPAHHEMAKE EEEEDHQLQI VLASEFGVHG IDPLVTEKSG
401: QEENAEAGDD DDDSEGSDIE LNMDGNSWSY TTTSRSRDTT AKNATSAHGS LSDRATECGA DAGAFDRRSE ATRDAPEQDW AADGCSDGGT TGRDEDEDAE
501: RYEAIKNLRE QMLTGHAFLF LSKGEADDDS DRRRRGFASH FEEDGDLW
001: MERSGTGSRQ RRASSTVQKL RLGDCNVGAR DPINSGSFMD IETRSRVETP TGSTVGVKTR LKDCSNALTT SKELLKIINR MWGQDDRPSS SMSLVSALHS
101: ELERARLQVN QLIHEHKPEN NDISYLMKRF AEEKAVWKSN EQEVVEAAIE SVAGELEVER KLRRRFESLN KKLGKELAET KSALMKAVKE IENEKRARVM
201: VEKVCDELAR DISEDKAEVE ELKRESFKVK EEVEKEREML QLADALREER VQMKLSEAKH QLEEKNAAVD KLRNQLQTYL KAKRCKEKTR EPPQTQLHNE
301: EAGDYLNHHI SFGSYNIEDG EVENGNEEGS GESDLHSIEL NIDNKSYKWP YGEENRGRKS TPRKSLSLQR SISDCVDWVV QSEKLQKSGD GGLDWGRSID
401: VEPKGYIDET QAYKPNKASS KDHHILSGSR LSNFRGGSVS KSRLSDASKG ENQNARKSRW
101: ELERARLQVN QLIHEHKPEN NDISYLMKRF AEEKAVWKSN EQEVVEAAIE SVAGELEVER KLRRRFESLN KKLGKELAET KSALMKAVKE IENEKRARVM
201: VEKVCDELAR DISEDKAEVE ELKRESFKVK EEVEKEREML QLADALREER VQMKLSEAKH QLEEKNAAVD KLRNQLQTYL KAKRCKEKTR EPPQTQLHNE
301: EAGDYLNHHI SFGSYNIEDG EVENGNEEGS GESDLHSIEL NIDNKSYKWP YGEENRGRKS TPRKSLSLQR SISDCVDWVV QSEKLQKSGD GGLDWGRSID
401: VEPKGYIDET QAYKPNKASS KDHHILSGSR LSNFRGGSVS KSRLSDASKG ENQNARKSRW
Arabidopsis Description
At3g11590/F24K9_26 [Source:UniProtKB/TrEMBL;Acc:Q9CAW9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.