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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • plastid 1
  • mitochondrion 3
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra001412.1-P
Bra001717.1-P
Bra001896.1-P
Bra002404.1-P
Bra002606.1-P
Bra006620.1-P
Bra006738.1-P
Bra011462.1-P
Bra012987.1-P
Bra020343.1-P
Bra022347.1-P
Bra023780.1-P
Bra032645.1-P
Bra033247.1-P
Bra034827.1-P
Bra037568.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G22310.1 Bra032645.1-P AT1G01630.1 21798944
AT5G22310.1 Bra033247.1-P AT1G01630.1 21798944
AT5G22310.1 Bra001412.1-P AT3G11590.1 21798944
AT5G22310.1 Bra034827.1-P AT3G11590.1 21798944
AT5G22310.1 Bra001717.1-P AT3G18710.1 21798944
AT5G22310.1 Bra022347.1-P AT3G18710.1 21798944
AT5G22310.1 Bra037568.1-P AT3G18710.1 21798944
AT5G22310.1 Bra001896.1-P AT3G22960.1 21798944
AT5G22310.1 Bra023780.1-P AT3G22960.1 21798944
AT5G22310.1 Bra011462.1-P AT4G33690.1 21798944
AT5G22310.1 Bra002404.1-P AT5G22310.1 21798944
AT5G22310.1 Bra006620.1-P AT5G22310.1 21798944
AT5G22310.1 Bra002606.1-P AT5G58950.1 21798944
AT5G22310.1 Bra006738.1-P AT5G58950.1 21798944
AT5G22310.1 Bra020343.1-P AT5G58950.1 21798944
AT5G22310.1 Bra012987.1-P AT5G61010.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX88802 Canola nucleus 96.01 92.52
AT5G22310.1 Thale cress nucleus 80.04 75.05
Bra002404.1-P Field mustard nucleus 78.94 73.55
Bra034827.1-P Field mustard plastid 37.69 27.69
VIT_06s0080g00930.t01 Wine grape plastid 39.69 27.45
Solyc11g068720.1.1 Tomato nucleus 35.26 25.08
KRH25284 Soybean plastid 36.14 24.73
KRH30384 Soybean plastid 35.48 24.17
PGSC0003DMT400067737 Potato nucleus 29.93 23.64
Os02t0506100-00 Rice plastid 22.84 23.62
Bra001412.1-P Field mustard nucleus 17.52 22.77
Solyc06g074190.2.1 Tomato nucleus 26.83 22.32
TraesCS2B01G299400.1 Wheat nucleus, plastid 27.49 22.26
TraesCS7B01G035800.1 Wheat nucleus 28.16 21.97
GSMUA_Achr6P16290_001 Banana nucleus 29.93 21.88
TraesCS7D01G134000.1 Wheat nucleus 27.94 21.76
TraesCS2A01G282200.1 Wheat nucleus 27.27 21.73
TraesCS7A01G134600.1 Wheat nucleus 27.72 21.59
TraesCS2D01G281000.1 Wheat nucleus, plastid 27.05 21.55
EES11990 Sorghum nucleus 27.05 21.48
PGSC0003DMT400015076 Potato nucleus 27.05 21.44
Zm00001d003996_P001 Maize nucleus 26.61 21.09
HORVU2Hr1G069400.8 Barley nucleus 23.73 21.02
Os04t0382800-00 Rice nucleus 25.72 20.32
Zm00001d025208_P002 Maize nucleus 26.16 20.14
GSMUA_Achr6P08260_001 Banana nucleus 24.83 19.55
KXG30263 Sorghum mitochondrion 25.72 18.65
Bra004552.1-P Field mustard nucleus 15.96 17.48
Zm00001d000402_P001 Maize mitochondrion 21.06 17.34
Bra027683.1-P Field mustard nucleus 21.51 16.84
Bra025484.1-P Field mustard nucleus 21.95 16.64
Bra018866.1-P Field mustard nucleus 24.39 16.34
Bra035788.1-P Field mustard mitochondrion 21.51 15.23
Protein Annotations
EnsemblPlants:Bra006620.1EnsemblPlants:Bra006620.1-PEnsemblPlantsGene:Bra006620ncoils:CoilPANTHER:PTHR31071PANTHER:PTHR31071:SF16
SEG:segUniParc:UPI0002540138UniProt:M4CQX9MapMan:35.2::
Description
AT5G22310 (E=3e-124) | unknown protein
Coordinates
chrA03:-:4303099..4304630
Molecular Weight (calculated)
51642.5 Da
IEP (calculated)
9.997
GRAVY (calculated)
-0.973
Length
451 amino acids
Sequence
(BLAST)
001: MDRKKGCKIR KRGGSSSSSS SLARQNRFKR AIFAGKRAAQ DNGGSGTPVK SISAAKTPVL LSLSPEKHSV DQFQKLPMSA RKLAATLWEI SDGGTDPALN
101: SDRDNLRSKK PSRNIRKKPT EISSNHIQLN SSDPISRFGS ERTILHERAT DPQKQKLIEY KTTGTNSVKT RFKNINDGLK TSKELVKVLK RIGKLGDDHK
201: TASNRLISAL VCELDRARSS LKHLMSEFDA EEEERRSLIE KLREEAVVER KLRQRTEKMN RKLGRELEEA KERERKMKEE MEREKRSRDV LEEVCDELAR
301: GIGEDKKDME KEREMMRIAD VLREERVQMK LMEAKFEFEE KHAAVERLKK DLRRVLEGKG SSEIGRVLEI IDGSDDESDL KSIELNMESG SKWGYVEDDD
401: PVEKRSVVVD NGERDESLKT LKEYIVSNMR FIGSSSSEQW NHRHLPSVEF V
Best Arabidopsis Sequence Match ( AT5G22310.1 )
(BLAST)
001: MEQRKKGCKI RKRGGSSSSS SSLARRNRFK RAIFAGKRAA QDDGGSGTPV KSITAAKTPV LLSFSPENLP IDHHQLQKSC VSARKLAATL WEINDDADPP
101: VNSDKDCLRS KKPSRYRAKK STEFSSIDFP PRSSDPISRL SSERIDLCDD MIRRRSTNPQ KLNPIEYKII GANSVKTRFK NVSDGLTTSK ELVKVLKRIG
201: ELGDDHKTAS NRLISALLCE LDRARSSLKH LMSELDEEEE EKRRLIESLQ EEAMVERKLR RRTEKMNRRL GRELTEAKET ERKMKEEMKR EKRAKDVLEE
301: VCDELTKGIG DDKKEMEKER EMMHIADVLR EERVQMKLTE AKFEFEDKYA AVERLKKELR RVLDGEEGKG SSEIRRILEV IDGSGSDDDE ESDLKSIELN
401: MESGSKWGYV DSLKDRRRFD GSGGDDDDDD PVEKRSVIVE NGERDESLKT LRDYIVSNVR CIGPSSSEQW NHRNLPSSEF V
Arabidopsis Description
AT5g22310/MWD9_9 [Source:UniProtKB/TrEMBL;Acc:Q93ZM2]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.