Factsheet for Bra018866.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22812	Canola	nucleus	97.47	99.39
AT1G50660.1	Thale cress	nucleus	87.07	80.83
Bra035788.1-P	Field mustard	mitochondrion	56.91	60.13
KRH46168	Soybean	nucleus	56.91	54.79
KRG98777	Soybean	nucleus	56.91	54.79
Solyc07g064580.2.1	Tomato	nucleus	53.94	53.94
KRH14411	Soybean	nucleus	55.13	53.77
VIT_19s0090g00370.t01	Wine grape	plastid	57.06	53.56
KRH73733	Soybean	nucleus	54.98	53.55
PGSC0003DMT400071667	Potato	nucleus	53.49	52.86
PGSC0003DMT400057488	Potato	nucleus	53.49	52.02
Solyc12g005010.1.1	Tomato	nucleus	51.71	51.86
GSMUA_Achr7P00230_001	Banana	nucleus	34.77	47.46
GSMUA_Achr6P00380_001	Banana	nucleus	30.16	47.43
GSMUA_Achr8P01540_001	Banana	nucleus	35.51	47.23
GSMUA_Achr6P19720_001	Banana	nucleus	48.14	46.22
GSMUA_Achr9P30230_001	Banana	nucleus, plastid	46.36	43.76
GSMUA_Achr10P...	Banana	nucleus, plastid	45.47	43.4
TraesCS1B01G329400.1	Wheat	plastid	40.56	41.55
GSMUA_Achr2P03040_001	Banana	nucleus	28.23	41.48
TraesCS1D01G317000.1	Wheat	nucleus, plastid	40.42	41.4
Zm00001d026344_P001	Maize	plastid	42.05	41.19
TraesCS1A01G317000.1	Wheat	plastid	40.42	41.15
EES12886	Sorghum	plastid	42.2	41.04
Zm00001d002252_P001	Maize	plastid	41.75	40.96
HORVU1Hr1G066770.1	Barley	mitochondrion, plasma membrane	40.42	40.3
Os04t0625000-01	Rice	nucleus	41.6	40.23
Zm00001d012593_P001	Maize	plastid	34.92	39.23
EES19759	Sorghum	plastid	38.93	39.22
TraesCS2B01G492000.1	Wheat	plastid	39.67	38.98
TraesCS2A01G469100.1	Wheat	plastid	39.82	38.67
Zm00001d043218_P001	Maize	plastid	38.48	38.48
TraesCS2D01G469200.1	Wheat	plastid	39.38	38.35
EES01592	Sorghum	plastid	38.04	37.87
Zm00001d038595_P001	Maize	nucleus, plastid	37.89	37.83
OQU80028	Sorghum	plastid	36.11	36.82
Os08t0190700-00	Rice	nucleus	32.24	36.59
Zm00001d000005_P002	Maize	plastid	35.22	34.4
TraesCS7A01G295000.1	Wheat	plastid	31.8	34.08
TraesCS7B01G197400.1	Wheat	plastid	31.8	33.23
TraesCS7D01G288600.1	Wheat	plastid	31.65	33.13
HORVU7Hr1G065950.7	Barley	vacuole	31.5	32.22
GSMUA_Achr4P23750_001	Banana	cytosol	18.72	30.88
Bra006620.1-P	Field mustard	nucleus	16.34	24.39
Bra034827.1-P	Field mustard	plastid	21.69	23.78
Bra002404.1-P	Field mustard	nucleus	16.34	22.73
Bra001412.1-P	Field mustard	nucleus	11.44	22.19
Bra004552.1-P	Field mustard	nucleus	13.52	22.09
Bra027683.1-P	Field mustard	nucleus	15.45	18.06
Bra025484.1-P	Field mustard	nucleus	15.6	17.65

Protein Annotations

EnsemblPlants:Bra018866.1	EnsemblPlants:Bra018866.1-P	EnsemblPlantsGene:Bra018866	ncoils:Coil	PANTHER:PTHR31071	PANTHER:PTHR31071:SF2
SEG:seg	UniParc:UPI000253EA83	UniProt:M4DQS3	MapMan:35.1	:	:

Description

AT1G50660 (E=9e-199) | unknown protein

Coordinates

chrA06:-:1529443..1532121

Molecular Weight (calculated)

76186.9 Da

IEP (calculated)

7.928

GRAVY (calculated)

-0.901

Length

673 amino acids

Sequence
(BLAST)

001: MKVTGKPYPT ATLQASESET KLFTNPPDLR AIQRATTTVT KRRARNPSLT RQRRSAAPGG RRSRPETPLL KWKVEDRKTE RGGGVVEEDD DYEDERETST
101: RRKDRRKTTR PVSVRKLAAG LWRLQVPDAV VSGGERKVKE GLGFQGGVPY LYHHSDKASG GSKNRIRQNP STIATTKNGF LCTLEPSMPF PHSAMEGATK
201: WDPVCMDTTE EVHQIYSNMK RIDQQVNAVS LVTSLEAELE EAHARIDELE SEKRSHKKKL EQFLRKVSEE RAAWRSREHE KVRAIIDDMK ADMSREKKTR
301: QRLEIVNHKL VNELADAKLA AKRYMQDFEK ERKARELIEE VCDELAKEIG EDKAEIEALK RESMSLREEV DDERRMLQMA EVWREERVQM KLIDAKVALE
401: EKYSQMNKLV AGLDSFLKTR DVVVDVKEVR EAEVLRETAA SVDIQEIKEF AYEPANPDDI FAMLEEMNLG EGHDDKEMEK KPVAYTHQNE EDDSGWETVS
501: HVEEQGSSYS PDGSIPSVNN HRESNASSCG KGWEETPTTE ISEVCSVPRR SSSRKVSSIA KLWRSSGASN NGDRDNNSFK VISMEGRKSS VGMVSSPERG
601: SSKGGFSPMM DLVGQWSSSP ESASHPHVNR GGMKGCIEWP RGAAQKHSLK AKLIEARIES QKVQLKHVLK QKI

Best Arabidopsis Sequence Match ( AT1G50660.1 )
(BLAST)

001: MKVTGKPYST ATLPAFESDK NLFSHGPDLR AIQRATTVTK RRARNPSLTR QRRSGPSGGR RSRPETPLLK WKVEDRNKER SGVVEDDDYE DDNHQVARSE
101: TTRRKDRRKI ARPVSVRKLA AGLWRLQVPD ASSSGGERKG KEGLGFQGNG GYMGVPYLYH HSDKPSGGQS NKIRQNPSTI ATTKNGFLCK LEPSMPFPHS
201: AMEGATKWDP VCLDTMEEVH QIYSNMKRID QQVNAVSLVS SLEAELEEAH ARIEDLESEK RSHKKKLEQF LRKVSEERAA WRSREHEKVR AIIDDMKTDM
301: NREKKTRQRL EIVNHKLVNE LADSKLAVKR YMQDYEKERK ARELIEEVCD ELAKEIGEDK AEIEALKRES MSLREEVDDE RRMLQMAEVW REERVQMKLI
401: DAKVALEERY SQMNKLVGDL ESFLRSRDIV TDVKEVREAE LLRETAASVN IQEIKEFTYV PANPDDIYAV FEEMNLGEAH DREMEKSVAY SPISHDSKVH
501: TVSLDANMMN KKGRHSDAYT HQNGDIEEDD SGWETVSHLE EQGSSYSPDG SIPSVNNKNH NHRHSNASSG GTESLGKVWD DTMTPTTEIS EVCSIPRRSS
601: KKVSSIAKLW RSTGASNGDR DSNYKVISME GMNGGRVSNG RKSSAGMVSP DRVSSKGGFS PMMDLVGQWN SSPESANHPH VNRGGMKGCI EWPRGAQKSS
701: LKSKLIEARI ESQKVQLKHV LKQRI

Arabidopsis Description

Actin cytoskeleton-regulatory complex pan-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LPT5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.