CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 4
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038595_P001	Maize	nucleus, plastid	87.87	87.09
TraesCS1B01G329400.1	Wheat	plastid	73.8	75.04
TraesCS1D01G317000.1	Wheat	nucleus, plastid	73.35	74.58
TraesCS1A01G317000.1	Wheat	plastid	72.9	73.68
HORVU1Hr1G066770.1	Barley	mitochondrion, plasma membrane	72.75	72.0
EES01592	Sorghum	plastid	61.23	60.5
GSMUA_Achr6P00380_001	Banana	nucleus	32.63	50.93
GSMUA_Achr7P00230_001	Banana	nucleus	36.38	49.29
GSMUA_Achr2P03040_001	Banana	nucleus	32.34	47.16
VIT_19s0090g00370.t01	Wine grape	plastid	43.56	40.59
KRH14411	Soybean	nucleus	41.47	40.14
Solyc07g064580.2.1	Tomato	nucleus	40.27	39.97
KRH73733	Soybean	nucleus	40.87	39.51
EES12886	Sorghum	plastid	40.72	39.31
CDY22812	Canola	nucleus	38.47	38.94
Bra018866.1-P	Field mustard	nucleus	39.22	38.93
CDY37111	Canola	nucleus	39.52	38.88
KRH20862	Soybean	cytosol	15.57	38.66
KRH46168	Soybean	nucleus	40.42	38.63
AT1G50660.1	Thale cress	nucleus	41.92	38.62
PGSC0003DMT400057488	Potato	nucleus	39.82	38.44
KRG98777	Soybean	nucleus	39.97	38.2
CDY29821	Canola	mitochondrion	35.63	37.25
Bra035788.1-P	Field mustard	mitochondrion	35.48	37.21
CDY25414	Canola	mitochondrion	35.48	37.21
OQU80028	Sorghum	plastid	36.53	36.97
PGSC0003DMT400071667	Potato	nucleus	37.57	36.86
VIT_10s0116g01830.t01	Wine grape	nucleus	40.27	36.5
AT3G20350.1	Thale cress	plastid	36.68	36.4
Solyc12g005010.1.1	Tomato	nucleus	36.53	36.36
PGSC0003DMT400042430	Potato	nucleus	30.09	32.01
Solyc02g080520.2.1	Tomato	nucleus	29.64	31.28
GSMUA_Achr4P23750_001	Banana	cytosol	18.86	30.88
KRH11424	Soybean	nucleus, plastid	17.66	30.65
KRH02074	Soybean	plastid	18.86	29.72
KRH51081	Soybean	plastid	19.61	29.31
EER97816	Sorghum	mitochondrion, plastid	24.1	27.06
KRH36516	Soybean	plastid	21.41	24.49
KRH11499	Soybean	plastid	24.55	24.4
EES11990	Sorghum	nucleus	16.92	19.89
KXG30263	Sorghum	mitochondrion	16.32	17.52
KXG29970	Sorghum	nucleus	17.52	16.71
OQU76466	Sorghum	nucleus	17.22	16.13

Protein Annotations

EnsemblPlants:EES19759	EnsemblPlantsGene:SORBI_3009G185900	EntrezGene:8080063	ncoils:Coil	PANTHER:PTHR31071	PANTHER:PTHR31071:SF31
ProteinID:EES19759	ProteinID:EES19759.1	RefSeq:XP_002441329.1	SEG:seg	UniParc:UPI0001A88FE1	UniProt:C5Z0D9
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:53897584..53901409

Molecular Weight (calculated)

74511.4 Da

IEP (calculated)

9.074

GRAVY (calculated)

-0.933

Length

668 amino acids

Sequence
(BLAST)

001: MARPRRSSPV AMTRSPARAA HGRAAATPRQ ASPSSRHPRR GRRLLRVQSP SLASSSARRA PAPAPAHAPP PATPPLRWPG DAVAPRGAGA AAAAAVRRIA
101: ASLWRAHPPP REPGKPRQRL EPSPRHLHTP DRCNYYKAVL EGRTGTKPLG NAIIREVGPY SPSPRIEMEV ATKWDRPCLN TSGGADYDFC DRHAAAADGE
201: ISALKEELMQ AHNRIHELEA ESRSAKKKLD HLVKNLAEEK ASWRSREHDK VRSILDAVKG DLNRERKNRQ RAEVMNSKLM DEFSELKSLA KRYLQDYEKE
301: RKARELMEEV CDELAKEIAD DKAEVEALKK ESMKIRDEVE EERKMLQMAE VWREERVQMK LVDAKLTLDS KYSQLSELQA NLESFLSFHR GSSVDKETVR
401: DGERLREAIS SMKLHGKEFS YKPPPPSEDI FAVFEELRQR EDISEKEIGQ CNGDTPMSHA TKIHTVSPET DIFLEKPANK YSTQPCARNE DDDDSGWETV
501: SHVEEQGSSN SPDGSEPSVN GFCGGNGASA SETDWEEDNC ENCRSNSGIC STTGENHRKG SSFARLWRSS NGDGRRKTGS DLLNGRLSSS RMPNAALSPD
601: LKNSEVCQVS PSVGDWSPDL LNPRVVRAMK GGVEWPQGTQ KRTQKSKLIN ARTNGRKVQL RQALEQKI

Best Arabidopsis Sequence Match ( AT1G50660.1 )
(BLAST)

001: MKVTGKPYST ATLPAFESDK NLFSHGPDLR AIQRATTVTK RRARNPSLTR QRRSGPSGGR RSRPETPLLK WKVEDRNKER SGVVEDDDYE DDNHQVARSE
101: TTRRKDRRKI ARPVSVRKLA AGLWRLQVPD ASSSGGERKG KEGLGFQGNG GYMGVPYLYH HSDKPSGGQS NKIRQNPSTI ATTKNGFLCK LEPSMPFPHS
201: AMEGATKWDP VCLDTMEEVH QIYSNMKRID QQVNAVSLVS SLEAELEEAH ARIEDLESEK RSHKKKLEQF LRKVSEERAA WRSREHEKVR AIIDDMKTDM
301: NREKKTRQRL EIVNHKLVNE LADSKLAVKR YMQDYEKERK ARELIEEVCD ELAKEIGEDK AEIEALKRES MSLREEVDDE RRMLQMAEVW REERVQMKLI
401: DAKVALEERY SQMNKLVGDL ESFLRSRDIV TDVKEVREAE LLRETAASVN IQEIKEFTYV PANPDDIYAV FEEMNLGEAH DREMEKSVAY SPISHDSKVH
501: TVSLDANMMN KKGRHSDAYT HQNGDIEEDD SGWETVSHLE EQGSSYSPDG SIPSVNNKNH NHRHSNASSG GTESLGKVWD DTMTPTTEIS EVCSIPRRSS
601: KKVSSIAKLW RSTGASNGDR DSNYKVISME GMNGGRVSNG RKSSAGMVSP DRVSSKGGFS PMMDLVGQWN SSPESANHPH VNRGGMKGCI EWPRGAQKSS
701: LKSKLIEARI ESQKVQLKHV LKQRI

Arabidopsis Description

Actin cytoskeleton-regulatory complex pan-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LPT5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.