Factsheet for GSMUA_Achr7P00230_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P00380_001	Banana	nucleus	57.61	66.36
GSMUA_Achr2P03040_001	Banana	nucleus	44.83	48.25
GSMUA_Achr8P01540_001	Banana	nucleus	46.25	45.06
KRH20862	Soybean	cytosol	23.94	43.87
KRH14411	Soybean	nucleus	52.94	37.83
TraesCS1B01G329400.1	Wheat	plastid	49.9	37.44
TraesCS1D01G317000.1	Wheat	nucleus, plastid	49.9	37.44
Solyc07g064580.2.1	Tomato	nucleus	50.91	37.3
GSMUA_Achr6P19720_001	Banana	nucleus	52.94	37.23
KRH73733	Soybean	nucleus	52.13	37.19
GSMUA_Achr10P...	Banana	nucleus, plastid	52.94	37.02
GSMUA_Achr4P23750_001	Banana	cytosol	30.63	37.01
TraesCS1A01G317000.1	Wheat	plastid	49.49	36.91
VIT_19s0090g00370.t01	Wine grape	plastid	53.35	36.68
EES19759	Sorghum	plastid	49.29	36.38
Os08t0190700-00	Rice	nucleus	43.2	35.92
HORVU1Hr1G066770.1	Barley	mitochondrion, plasma membrane	49.09	35.85
PGSC0003DMT400057488	Potato	nucleus	50.3	35.84
PGSC0003DMT400071667	Potato	nucleus	49.49	35.83
KRH46168	Soybean	nucleus	50.51	35.62
CDY22812	Canola	nucleus	47.46	35.45
KRG98777	Soybean	nucleus	50.1	35.34
GSMUA_Achr9P30230_001	Banana	nucleus, plastid	50.91	35.2
Zm00001d012593_P001	Maize	plastid	42.6	35.06
VIT_10s0116g01830.t01	Wine grape	nucleus	52.33	35.01
Solyc12g005010.1.1	Tomato	nucleus	47.46	34.87
Bra018866.1-P	Field mustard	nucleus	47.46	34.77
Zm00001d038595_P001	Maize	nucleus, plastid	47.46	34.72
CDY37111	Canola	nucleus	47.06	34.17
EES12886	Sorghum	plastid	47.87	34.1
AT1G50660.1	Thale cress	nucleus	49.7	33.79
Zm00001d002252_P001	Maize	plastid	46.65	33.53
Zm00001d026344_P001	Maize	plastid	46.25	33.19
Os04t0625000-01	Rice	nucleus	46.65	33.05
CDY25414	Canola	mitochondrion	42.6	32.97
Bra035788.1-P	Field mustard	mitochondrion	42.6	32.97
TraesCS2B01G492000.1	Wheat	plastid	45.44	32.7
Zm00001d043218_P001	Maize	plastid	44.62	32.69
CDY29821	Canola	mitochondrion	42.19	32.55
TraesCS2A01G469100.1	Wheat	plastid	45.44	32.32
EES01592	Sorghum	plastid	44.22	32.25
TraesCS2D01G469200.1	Wheat	plastid	45.03	32.13
AT3G20350.1	Thale cress	plastid	43.61	31.95
PGSC0003DMT400042430	Potato	nucleus	39.76	31.21
KRH02074	Soybean	plastid	26.77	31.13
KRH51081	Soybean	plastid	27.99	30.87
OQU80028	Sorghum	plastid	41.18	30.76
Solyc02g080520.2.1	Tomato	nucleus	38.54	30.02
KRH11424	Soybean	nucleus, plastid	22.92	29.35
Zm00001d000005_P002	Maize	plastid	40.57	29.03
TraesCS7D01G288600.1	Wheat	plastid	37.12	28.46
TraesCS7A01G295000.1	Wheat	plastid	36.11	28.34
TraesCS7B01G197400.1	Wheat	plastid	36.51	27.95
HORVU7Hr1G065950.7	Barley	vacuole	36.31	27.2
KRH11499	Soybean	plastid	31.44	23.07
KRH36516	Soybean	plastid	26.98	22.77
GSMUA_Achr6P16290_001	Banana	nucleus	20.28	16.21
GSMUA_Achr10P...	Banana	nucleus	19.07	14.26
GSMUA_Achr10P...	Banana	nucleus	19.27	14.1
GSMUA_Achr6P08260_001	Banana	nucleus	13.59	11.69

Protein Annotations

EnsemblPlants:GSMUA_Achr7P00230_001	EnsemblPlants:GSMUA_Achr7T00230_001	EnsemblPlantsGene:GSMUA_Achr7G00230_001	ncoils:Coil	PANTHER:PTHR31071	PANTHER:PTHR31071:SF2
UniParc:UPI0002949522	UniProt:M0TDG3	MapMan:35.1	:	:	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G00230_001]

Coordinates

chr7:+:225657..227138

Molecular Weight (calculated)

55603.4 Da

IEP (calculated)

6.794

GRAVY (calculated)

-0.777

Length

493 amino acids

Sequence
(BLAST)

001: MFTNFALERT TKWEAGCSGS AEGIYHTFGH QKLLKDWLNT ASVVSVLQAE LEQAHCHINE LEKERESAKE KLDHFLKKLG EEKASWQINE HEKVRNIITS
101: IKDDLNRERK SRKRMEILNS KLVNELAEAK LSAKQYLQNY EKERKARELI EEVCDELAKE IGDDKAKVES LKRESTKIRE EVDEERKMLQ MAEVWREERV
201: QMKLVDAKLM LEEKYAELIK LQSDLDSFLK SCDITNANAS SLKEAEVLNV VASSMKFQDV EFLYQPPASG DFLVSDELKS RDEANERGIE KCYGYSPKSH
301: ASRIHTVSPE TDIFLESCVS HAEGQGSCNS PKGSDPSANG IHEESHASVS RTDWNLKSDA SNLKSETSEI CSGTTKQSRK KVPYIGKFWR SSCTSNSYNK
401: KTPLDISNGK LPNGGLLNAA LSPDMISGEA GLSSPSVEQG SSSNSINPHV GRGTKGYVEW SRDTKNHSLK TKLLGMRMEN QKVQLRHVLE HKS

Best Arabidopsis Sequence Match ( AT1G50660.1 )
(BLAST)

001: MKVTGKPYST ATLPAFESDK NLFSHGPDLR AIQRATTVTK RRARNPSLTR QRRSGPSGGR RSRPETPLLK WKVEDRNKER SGVVEDDDYE DDNHQVARSE
101: TTRRKDRRKI ARPVSVRKLA AGLWRLQVPD ASSSGGERKG KEGLGFQGNG GYMGVPYLYH HSDKPSGGQS NKIRQNPSTI ATTKNGFLCK LEPSMPFPHS
201: AMEGATKWDP VCLDTMEEVH QIYSNMKRID QQVNAVSLVS SLEAELEEAH ARIEDLESEK RSHKKKLEQF LRKVSEERAA WRSREHEKVR AIIDDMKTDM
301: NREKKTRQRL EIVNHKLVNE LADSKLAVKR YMQDYEKERK ARELIEEVCD ELAKEIGEDK AEIEALKRES MSLREEVDDE RRMLQMAEVW REERVQMKLI
401: DAKVALEERY SQMNKLVGDL ESFLRSRDIV TDVKEVREAE LLRETAASVN IQEIKEFTYV PANPDDIYAV FEEMNLGEAH DREMEKSVAY SPISHDSKVH
501: TVSLDANMMN KKGRHSDAYT HQNGDIEEDD SGWETVSHLE EQGSSYSPDG SIPSVNNKNH NHRHSNASSG GTESLGKVWD DTMTPTTEIS EVCSIPRRSS
601: KKVSSIAKLW RSTGASNGDR DSNYKVISME GMNGGRVSNG RKSSAGMVSP DRVSSKGGFS PMMDLVGQWN SSPESANHPH VNRGGMKGCI EWPRGAQKSS
701: LKSKLIEARI ESQKVQLKHV LKQRI

Arabidopsis Description

Actin cytoskeleton-regulatory complex pan-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LPT5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.