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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • plastid 4
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:nucleus, plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:nucleus
TargetP:plastid
YLoc:plastid
vacuole: 16581873
msms PMID: 16581873 doi
A Endler, S Meyer, S Schelbert, T Schneider, W Weschke, SW Peters, F Keller, S Baginsky, E Martinoia, UG Schmidt
University of Zurich, Institute of Plant Biology, CH-8008 Zurich, Switzerland.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7A01G295000.1 Wheat plastid 81.31 85.19
TraesCS7B01G197400.1 Wheat plastid 81.91 83.7
TraesCS7D01G288600.1 Wheat plastid 81.0 82.89
Os08t0190700-00 Rice nucleus 51.52 57.17
OQU80028 Sorghum plastid 55.47 55.3
Zm00001d000005_P002 Maize plastid 54.86 52.39
GSMUA_Achr6P00380_001 Banana nucleus 25.08 38.55
GSMUA_Achr7P00230_001 Banana nucleus 27.2 36.31
GSMUA_Achr2P03040_001 Banana nucleus 24.47 35.15
Solyc07g064580.2.1 Tomato nucleus 33.89 33.14
KRH20862 Soybean cytosol 13.07 31.97
PGSC0003DMT400057488 Potato nucleus 33.43 31.79
Bra018866.1-P Field mustard nucleus 32.22 31.5
VIT_19s0090g00370.t01 Wine grape plastid 34.19 31.38
CDY37111 Canola nucleus 32.22 31.22
CDY22812 Canola nucleus 31.31 31.21
PGSC0003DMT400071667 Potato nucleus 31.61 30.54
KRH14411 Soybean nucleus 31.76 30.29
HORVU1Hr1G066770.1 Barley mitochondrion, plasma membrane 31.0 30.22
Bra035788.1-P Field mustard mitochondrion 29.18 30.14
CDY25414 Canola mitochondrion 29.18 30.14
Solyc12g005010.1.1 Tomato nucleus 30.7 30.1
KRH73733 Soybean nucleus 31.61 30.1
KRG98777 Soybean nucleus 31.76 29.9
VIT_10s0116g01830.t01 Wine grape nucleus 33.28 29.72
KRH46168 Soybean nucleus 31.46 29.61
CDY29821 Canola mitochondrion 28.72 29.58
AT3G20350.1 Thale cress plastid 30.24 29.57
AT1G50660.1 Thale cress nucleus 32.52 29.52
KRH11424 Soybean nucleus, plastid 15.65 26.75
PGSC0003DMT400042430 Potato nucleus 24.47 25.64
KRH51081 Soybean plastid 17.33 25.5
KRH02074 Soybean plastid 16.26 25.24
Solyc02g080520.2.1 Tomato nucleus 24.16 25.12
GSMUA_Achr4P23750_001 Banana cytosol 15.2 24.51
KRH36516 Soybean plastid 19.6 22.09
KRH11499 Soybean plastid 21.88 21.43
HORVU2Hr1G069400.8 Barley nucleus 14.74 19.06
HORVU7Hr1G080670.9 Barley nucleus, plastid 14.89 11.65
Protein Annotations
EnsemblPlants:HORVU7Hr1G065950.7EnsemblPlantsGene:HORVU7Hr1G065950ncoils:CoilPANTHER:PTHR31071PANTHER:PTHR31071:SF12SEG:seg
UniParc:UPI000B46598AUniProt:A0A287WQY7MapMan:35.2:::
Description
No Description!
Coordinates
chrchr7H:-:330348071..330351447
Molecular Weight (calculated)
74832.6 Da
IEP (calculated)
6.829
GRAVY (calculated)
-0.757
Length
658 amino acids
Sequence
(BLAST)
001: VAAASNGSPL RPHVYTTAGT LTPTMPRSAI SLRVPSRRRF LKTPIAPSSV NYSSAASGRP GGPCTPKLRW SFRESQEGVS EQKAPIASSV RRLGAAVWRL
101: RPSEEAPAVE RQGKSRVDLE FIPRHLQVQL LRKHHLGHKH GLKVETSSPN SVLEQHSEEL HKVQLHLAPA LMPITTLENA TKWESESVKG DELDGAYVIA
201: NQLDLIEKQQ GQTHANILHM ELQRAQDRVD KLEAERSSAK KQLDRLSAKK QLDRLLEKLR EEKAAWWRRE HKKAQSVLED MKADLDHEKK NRRQLENINL
301: KLIDELKEVK LAANNLLEEY DKERKMREMT EEVCNKLARE VEEQKSDIEV LERNFVKLRG EVDEDRKLLQ MAEVWREERV QMKLVDARLT LEDKYGELCK
401: LQQDAEAFVA SLGCAKGDIS ILVGEAENII REIGLVRDQE IQFKYETPAA SEEILAIFEE LLPSHELGRC KAQRADIWLE NPTNRNPCQD SEIEDGNSWE
501: TTSHQDVQGS SFSWNGNGSE PSVNNVVCDG ISWTSGDDSE EVWQNDMSNI KVVEHKKKQS AISKFWGHCP RKNHGIQEVE VENSLNRGNM YYYSGEAANR
601: GMGQSSPSME PWSSPDSMNC GFRGCMELVQ RHSLKAKLLE ARMESQKIKL RRVLNQTT
Best Arabidopsis Sequence Match ( AT1G50660.1 )
(BLAST)
001: MKVTGKPYST ATLPAFESDK NLFSHGPDLR AIQRATTVTK RRARNPSLTR QRRSGPSGGR RSRPETPLLK WKVEDRNKER SGVVEDDDYE DDNHQVARSE
101: TTRRKDRRKI ARPVSVRKLA AGLWRLQVPD ASSSGGERKG KEGLGFQGNG GYMGVPYLYH HSDKPSGGQS NKIRQNPSTI ATTKNGFLCK LEPSMPFPHS
201: AMEGATKWDP VCLDTMEEVH QIYSNMKRID QQVNAVSLVS SLEAELEEAH ARIEDLESEK RSHKKKLEQF LRKVSEERAA WRSREHEKVR AIIDDMKTDM
301: NREKKTRQRL EIVNHKLVNE LADSKLAVKR YMQDYEKERK ARELIEEVCD ELAKEIGEDK AEIEALKRES MSLREEVDDE RRMLQMAEVW REERVQMKLI
401: DAKVALEERY SQMNKLVGDL ESFLRSRDIV TDVKEVREAE LLRETAASVN IQEIKEFTYV PANPDDIYAV FEEMNLGEAH DREMEKSVAY SPISHDSKVH
501: TVSLDANMMN KKGRHSDAYT HQNGDIEEDD SGWETVSHLE EQGSSYSPDG SIPSVNNKNH NHRHSNASSG GTESLGKVWD DTMTPTTEIS EVCSIPRRSS
601: KKVSSIAKLW RSTGASNGDR DSNYKVISME GMNGGRVSNG RKSSAGMVSP DRVSSKGGFS PMMDLVGQWN SSPESANHPH VNRGGMKGCI EWPRGAQKSS
701: LKSKLIEARI ESQKVQLKHV LKQRI
Arabidopsis Description
Actin cytoskeleton-regulatory complex pan-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LPT5]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.