CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, plastid

Predictor Summary:

plastid 4
cytosol 1
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20862	Soybean	cytosol	57.66	82.53
KRH36516	Soybean	plastid	56.1	36.99
KRH11499	Soybean	plastid	59.22	33.93
KRH51081	Soybean	plastid	34.55	29.75
KRH02074	Soybean	plastid	31.69	28.77
GSMUA_Achr6P00380_001	Banana	nucleus	27.79	25.0
GSMUA_Achr7P00230_001	Banana	nucleus	29.35	22.92
GSMUA_Achr2P03040_001	Banana	nucleus	26.49	22.27
KRH14411	Soybean	nucleus	38.7	21.59
KRH46168	Soybean	nucleus	38.96	21.46
KRH73733	Soybean	nucleus	37.92	21.13
VIT_10s0116g01830.t01	Wine grape	nucleus	40.26	21.03
KRG98777	Soybean	nucleus	38.18	21.03
GSMUA_Achr8P01540_001	Banana	nucleus	27.27	20.75
GSMUA_Achr6P19720_001	Banana	nucleus	34.55	18.97
PGSC0003DMT400042430	Potato	nucleus	30.91	18.95
TraesCS1B01G329400.1	Wheat	plastid	31.95	18.72
Solyc02g080520.2.1	Tomato	nucleus	30.65	18.64
Zm00001d026344_P001	Maize	plastid	33.25	18.63
Zm00001d012593_P001	Maize	plastid	28.83	18.53
TraesCS1A01G317000.1	Wheat	plastid	31.69	18.46
GSMUA_Achr10P...	Banana	nucleus, plastid	33.77	18.44
TraesCS1D01G317000.1	Wheat	nucleus, plastid	31.43	18.42
Zm00001d002252_P001	Maize	plastid	32.73	18.37
GSMUA_Achr4P23750_001	Banana	cytosol	19.22	18.14
Zm00001d043218_P001	Maize	plastid	31.69	18.13
GSMUA_Achr9P30230_001	Banana	nucleus, plastid	33.51	18.09
EES12886	Sorghum	plastid	32.47	18.06
HORVU1Hr1G066770.1	Barley	mitochondrion, plasma membrane	31.17	17.78
EES19759	Sorghum	plastid	30.65	17.66
Zm00001d038595_P001	Maize	nucleus, plastid	30.65	17.51
EES01592	Sorghum	plastid	30.65	17.46
TraesCS2B01G492000.1	Wheat	plastid	30.91	17.37
Os04t0625000-01	Rice	nucleus	31.17	17.24
TraesCS2D01G469200.1	Wheat	plastid	30.91	17.22
Os08t0190700-00	Rice	nucleus	26.49	17.2
TraesCS2A01G469100.1	Wheat	plastid	30.91	17.17
OQU80028	Sorghum	plastid	29.09	16.97
TraesCS7A01G295000.1	Wheat	plastid	26.49	16.24
TraesCS7D01G288600.1	Wheat	plastid	26.75	16.02
Zm00001d000005_P002	Maize	plastid	28.57	15.97
TraesCS7B01G197400.1	Wheat	plastid	26.23	15.68
HORVU7Hr1G065950.7	Barley	vacuole	26.75	15.65
KRH67971	Soybean	plastid	26.23	15.3
KRG96225	Soybean	nucleus	25.97	15.27
KRH25284	Soybean	plastid	24.94	14.57
KRH30384	Soybean	plastid	24.42	14.2
KRH47994	Soybean	nucleus	22.34	13.11
KRH06548	Soybean	nucleus	22.08	12.9
KRH68854	Soybean	nucleus	19.22	12.48
KRG97105	Soybean	nucleus	20.78	12.44
KRH27868	Soybean	nucleus	19.48	11.21
KRH77618	Soybean	nucleus	18.96	10.96

Protein Annotations

EMBL:ACUP02009209	EnsemblPlants:KRH11424	EnsemblPlantsGene:GLYMA_15G107500	ncoils:Coil	PANTHER:PTHR31071	PANTHER:PTHR31071:SF14
ProteinID:KRH11424	ProteinID:KRH11424.1	SEG:seg	UniParc:UPI000294B35E	UniProt:K7MAR6	MapMan:35.2

Description

hypothetical protein

Coordinates

chr15:+:8435042..8443925

Molecular Weight (calculated)

44603.7 Da

IEP (calculated)

8.375

GRAVY (calculated)

-0.710

Length

385 amino acids

Sequence
(BLAST)

001: MASSNNIQAI PRHRRRGTQT KHSGDGSCSS PVNSWELGSK KNEVSARKLA AGLWQMQCMQ VSRDHAAAFG RSSLPSSVSQ LANGNVRIRF LHYDKPEEKF
101: QDTKDQLKRP ITILRSRNRL RCELESSIPH LNGSKGVATI WNPTRNEASN EFIMIHSRKL LEDKKVVGNH NSVVSTLLEE LLQAQRSINK LKAEQKSLKK
201: NVEHFLQNLK VENIFLKHKE HYKIKATLDD LKGMLERERR SRERMELLNT KLVHELAEAN LLAKQFMTNC EKEKKERELM EEMCEELAMQ IGEDKAKFTV
301: VLSESMRICE KVEEERNMMQ MAELWREERV QMKLADAQLV LEDKYNQLVQ LYASLEMFFM SRGTELETTE LEDAESIKQE VESIN

Best Arabidopsis Sequence Match ( AT1G50660.1 )
(BLAST)

001: MKVTGKPYST ATLPAFESDK NLFSHGPDLR AIQRATTVTK RRARNPSLTR QRRSGPSGGR RSRPETPLLK WKVEDRNKER SGVVEDDDYE DDNHQVARSE
101: TTRRKDRRKI ARPVSVRKLA AGLWRLQVPD ASSSGGERKG KEGLGFQGNG GYMGVPYLYH HSDKPSGGQS NKIRQNPSTI ATTKNGFLCK LEPSMPFPHS
201: AMEGATKWDP VCLDTMEEVH QIYSNMKRID QQVNAVSLVS SLEAELEEAH ARIEDLESEK RSHKKKLEQF LRKVSEERAA WRSREHEKVR AIIDDMKTDM
301: NREKKTRQRL EIVNHKLVNE LADSKLAVKR YMQDYEKERK ARELIEEVCD ELAKEIGEDK AEIEALKRES MSLREEVDDE RRMLQMAEVW REERVQMKLI
401: DAKVALEERY SQMNKLVGDL ESFLRSRDIV TDVKEVREAE LLRETAASVN IQEIKEFTYV PANPDDIYAV FEEMNLGEAH DREMEKSVAY SPISHDSKVH
501: TVSLDANMMN KKGRHSDAYT HQNGDIEEDD SGWETVSHLE EQGSSYSPDG SIPSVNNKNH NHRHSNASSG GTESLGKVWD DTMTPTTEIS EVCSIPRRSS
601: KKVSSIAKLW RSTGASNGDR DSNYKVISME GMNGGRVSNG RKSSAGMVSP DRVSSKGGFS PMMDLVGQWN SSPESANHPH VNRGGMKGCI EWPRGAQKSS
701: LKSKLIEARI ESQKVQLKHV LKQRI

Arabidopsis Description

Actin cytoskeleton-regulatory complex pan-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LPT5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.