Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P00230_001 | Banana | nucleus | 66.36 | 57.61 |
| GSMUA_Achr2P03040_001 | Banana | nucleus | 54.67 | 51.09 |
| GSMUA_Achr8P01540_001 | Banana | nucleus | 51.4 | 43.48 |
| KRH20862 | Soybean | cytosol | 25.93 | 41.26 |
| GSMUA_Achr6P19720_001 | Banana | nucleus | 58.18 | 35.52 |
| TraesCS1B01G329400.1 | Wheat | plastid | 53.04 | 34.55 |
| GSMUA_Achr10P... | Banana | nucleus, plastid | 56.78 | 34.47 |
| TraesCS1D01G317000.1 | Wheat | nucleus, plastid | 52.8 | 34.4 |
| GSMUA_Achr9P30230_001 | Banana | nucleus, plastid | 56.31 | 33.8 |
| TraesCS1A01G317000.1 | Wheat | plastid | 52.1 | 33.74 |
| GSMUA_Achr4P23750_001 | Banana | cytosol | 32.01 | 33.58 |
| HORVU1Hr1G066770.1 | Barley | mitochondrion, plasma membrane | 51.64 | 32.74 |
| Solyc07g064580.2.1 | Tomato | nucleus | 51.4 | 32.69 |
| EES19759 | Sorghum | plastid | 50.93 | 32.63 |
| KRH14411 | Soybean | nucleus | 52.34 | 32.46 |
| KRH73733 | Soybean | nucleus | 52.34 | 32.42 |
| Os08t0190700-00 | Rice | nucleus | 44.86 | 32.38 |
| VIT_19s0090g00370.t01 | Wine grape | plastid | 54.21 | 32.36 |
| KRH46168 | Soybean | nucleus | 52.57 | 32.19 |
| Zm00001d012593_P001 | Maize | plastid | 44.86 | 32.05 |
| Zm00001d038595_P001 | Maize | nucleus, plastid | 50.47 | 32.05 |
| KRG98777 | Soybean | nucleus | 52.34 | 32.05 |
| PGSC0003DMT400057488 | Potato | nucleus | 50.93 | 31.5 |
| Zm00001d026344_P001 | Maize | plastid | 50.23 | 31.3 |
| VIT_10s0116g01830.t01 | Wine grape | nucleus | 52.8 | 30.66 |
| CDY22812 | Canola | nucleus | 47.2 | 30.61 |
| EES12886 | Sorghum | plastid | 49.07 | 30.35 |
| Zm00001d002252_P001 | Maize | plastid | 48.6 | 30.32 |
| Bra018866.1-P | Field mustard | nucleus | 47.43 | 30.16 |
| Zm00001d043218_P001 | Maize | plastid | 47.43 | 30.16 |
| EES01592 | Sorghum | plastid | 47.2 | 29.88 |
| CDY37111 | Canola | nucleus | 47.2 | 29.75 |
| Os04t0625000-01 | Rice | nucleus | 48.36 | 29.74 |
| Solyc12g005010.1.1 | Tomato | nucleus | 46.5 | 29.66 |
| Bra035788.1-P | Field mustard | mitochondrion | 43.93 | 29.51 |
| CDY25414 | Canola | mitochondrion | 43.93 | 29.51 |
| CDY29821 | Canola | mitochondrion | 43.93 | 29.42 |
| AT1G50660.1 | Thale cress | nucleus | 49.77 | 29.38 |
| PGSC0003DMT400071667 | Potato | nucleus | 46.73 | 29.37 |
| TraesCS2B01G492000.1 | Wheat | plastid | 46.26 | 28.91 |
| AT3G20350.1 | Thale cress | plastid | 45.33 | 28.83 |
| OQU80028 | Sorghum | plastid | 44.39 | 28.79 |
| TraesCS2A01G469100.1 | Wheat | plastid | 46.5 | 28.72 |
| TraesCS2D01G469200.1 | Wheat | plastid | 46.03 | 28.51 |
| KRH11424 | Soybean | nucleus, plastid | 25.0 | 27.79 |
| Zm00001d000005_P002 | Maize | plastid | 44.63 | 27.72 |
| PGSC0003DMT400042430 | Potato | nucleus | 40.42 | 27.55 |
| KRH02074 | Soybean | plastid | 26.4 | 26.65 |
| Solyc02g080520.2.1 | Tomato | nucleus | 39.25 | 26.54 |
| TraesCS7D01G288600.1 | Wheat | plastid | 39.25 | 26.13 |
| TraesCS7A01G295000.1 | Wheat | plastid | 37.85 | 25.8 |
| KRH51081 | Soybean | plastid | 26.87 | 25.73 |
| TraesCS7B01G197400.1 | Wheat | plastid | 38.32 | 25.47 |
| HORVU7Hr1G065950.7 | Barley | vacuole | 38.55 | 25.08 |
| KRH36516 | Soybean | plastid | 28.27 | 20.72 |
| KRH11499 | Soybean | plastid | 30.84 | 19.64 |
| GSMUA_Achr6P16290_001 | Banana | nucleus | 22.43 | 15.56 |
| GSMUA_Achr10P... | Banana | nucleus | 20.79 | 13.51 |
| GSMUA_Achr10P... | Banana | nucleus | 20.09 | 12.76 |
| GSMUA_Achr6P08260_001 | Banana | nucleus | 15.19 | 11.34 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P00380_001 | EnsemblPlants:GSMUA_Achr6T00380_001 | EnsemblPlantsGene:GSMUA_Achr6G00380_001 | ncoils:Coil | PANTHER:PTHR31071 | PANTHER:PTHR31071:SF2 |
| SEG:seg | UniParc:UPI0002963FE9 | UniProt:M0T2Y6 | MapMan:35.2 | : | : |
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G00380_001]
Coordinates
chr6:+:277130..278620
Molecular Weight (calculated)
49711.6 Da
IEP (calculated)
5.916
GRAVY (calculated)
-0.889
Length
428 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKATKWEAG CLRSSDKVYH NDGHLKLPKD WLTTTSIISI LQAELKQARH RINELENERR SAKEKLNHFL RKLAVEKASW QNRESREHEK VLNIIEVIKD
101: DLSRERKGRK RVEIMNSKLV HELAEAKLLA KQYLQDYEKE KKERELIEEV CNQFAKEIGH DKAEAESLKR ESTKIQEELD EERRMLQMAE VWREERVQMK
201: LVDAKLMLEE KYAELSELQA DLDAFLRAHS DSNGNMSLLK EAEAFREAAS LLKFQDIKFH YQPPPSSGDI FSIFEELQPR EETIEREIDP CCGYSPASHA
301: SKIHTVSPET DIFLENPMKM RDEDHSDLES MSYAEGQGSC NSPEAHEESV ASVSGTDCDM KRDNDSLNSE ISEVCSRTTR QSRKVSSIGR FWRSTSREAK
401: NHSLKAKLLE ARMENWKIQL CDVMKHNS
101: DLSRERKGRK RVEIMNSKLV HELAEAKLLA KQYLQDYEKE KKERELIEEV CNQFAKEIGH DKAEAESLKR ESTKIQEELD EERRMLQMAE VWREERVQMK
201: LVDAKLMLEE KYAELSELQA DLDAFLRAHS DSNGNMSLLK EAEAFREAAS LLKFQDIKFH YQPPPSSGDI FSIFEELQPR EETIEREIDP CCGYSPASHA
301: SKIHTVSPET DIFLENPMKM RDEDHSDLES MSYAEGQGSC NSPEAHEESV ASVSGTDCDM KRDNDSLNSE ISEVCSRTTR QSRKVSSIGR FWRSTSREAK
401: NHSLKAKLLE ARMENWKIQL CDVMKHNS
001: MESITEWDLG SLRTYYSVEP SENFQEDEFL DFNLVPCLQT ELWKAQTRIK ELEAEKFKSE ETIRCLIRNQ RNEKEETTNP FVDYLKEKLS KEREEKKRVK
101: AENSRLKKKI LDMESSVNRL RRERDTMEKV CEELVTRIDE LKVNTRRVWD ETEEERQMLQ MAEMWREERV RVKFMDAKLA LQEKYEEMNL FVVELEKCLE
201: TAREVGGIEE KRLRHGEGLI KMAKSMEVVD SKIDFERFEF VSDEGNV
101: AENSRLKKKI LDMESSVNRL RRERDTMEKV CEELVTRIDE LKVNTRRVWD ETEEERQMLQ MAEMWREERV RVKFMDAKLA LQEKYEEMNL FVVELEKCLE
201: TAREVGGIEE KRLRHGEGLI KMAKSMEVVD SKIDFERFEF VSDEGNV
Arabidopsis Description
BRANCHLESS TRICHOME-like protein [Source:UniProtKB/TrEMBL;Acc:Q9SAA8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.