CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH14411	Soybean	nucleus	93.63	93.77
KRG98777	Soybean	nucleus	74.1	73.25
KRH46168	Soybean	nucleus	73.66	72.82
VIT_19s0090g00370.t01	Wine grape	plastid	63.53	61.23
Solyc07g064580.2.1	Tomato	nucleus	55.14	56.61
PGSC0003DMT400057488	Potato	nucleus	55.43	55.35
AT1G50660.1	Thale cress	nucleus	57.74	55.03
Bra018866.1-P	Field mustard	nucleus	53.55	54.98
CDY22812	Canola	nucleus	52.24	54.7
CDY37111	Canola	nucleus	53.69	54.64
PGSC0003DMT400071667	Potato	nucleus	52.53	53.3
GSMUA_Achr6P00380_001	Banana	nucleus	32.42	52.34
Solyc12g005010.1.1	Tomato	nucleus	50.65	52.16
GSMUA_Achr7P00230_001	Banana	nucleus	37.19	52.13
AT3G20350.1	Thale cress	plastid	48.91	50.22
CDY25414	Canola	mitochondrion	45.3	49.14
Bra035788.1-P	Field mustard	mitochondrion	45.3	49.14
CDY29821	Canola	mitochondrion	45.15	48.83
GSMUA_Achr8P01540_001	Banana	nucleus	35.46	48.42
GSMUA_Achr6P19720_001	Banana	nucleus	48.34	47.65
GSMUA_Achr9P30230_001	Banana	nucleus, plastid	46.6	45.16
GSMUA_Achr10P...	Banana	nucleus, plastid	46.02	45.11
GSMUA_Achr2P03040_001	Banana	nucleus	29.38	44.32
KRH20862	Soybean	cytosol	16.93	43.49
TraesCS1B01G329400.1	Wheat	plastid	41.1	43.23
TraesCS1D01G317000.1	Wheat	nucleus, plastid	40.52	42.62
TraesCS1A01G317000.1	Wheat	plastid	40.67	42.51
Zm00001d026344_P001	Maize	plastid	42.11	42.36
EES12886	Sorghum	plastid	42.26	42.2
Zm00001d002252_P001	Maize	plastid	41.24	41.55
Os04t0625000-01	Rice	nucleus	41.68	41.38
HORVU1Hr1G066770.1	Barley	mitochondrion, plasma membrane	40.23	41.19
Zm00001d012593_P001	Maize	plastid	35.6	41.07
EES19759	Sorghum	plastid	39.51	40.87
Zm00001d038595_P001	Maize	nucleus, plastid	39.65	40.65
Zm00001d043218_P001	Maize	plastid	38.93	39.97
EES01592	Sorghum	plastid	38.64	39.5
TraesCS2B01G492000.1	Wheat	plastid	39.07	39.42
TraesCS2A01G469100.1	Wheat	plastid	39.22	39.11
TraesCS2D01G469200.1	Wheat	plastid	38.78	38.78
Os08t0190700-00	Rice	nucleus	32.71	38.11
KRH11424	Soybean	nucleus, plastid	21.13	37.92
OQU80028	Sorghum	plastid	35.75	37.42
KRH02074	Soybean	plastid	22.87	37.26
KRH51081	Soybean	plastid	23.73	36.69
Zm00001d000005_P002	Maize	plastid	35.46	35.56
TraesCS7A01G295000.1	Wheat	plastid	29.52	32.48
TraesCS7D01G288600.1	Wheat	plastid	30.1	32.35
GSMUA_Achr4P23750_001	Banana	cytosol	18.96	32.11
TraesCS7B01G197400.1	Wheat	plastid	29.52	31.68
HORVU7Hr1G065950.7	Barley	vacuole	30.1	31.61
KRH11499	Soybean	plastid	30.39	31.25
KRH36516	Soybean	plastid	26.05	30.82
KRG96225	Soybean	nucleus	24.89	26.26
KRH67971	Soybean	plastid	24.75	25.91
KRH25284	Soybean	plastid	21.85	22.91
KRH30384	Soybean	plastid	20.98	21.9
KRH68854	Soybean	nucleus	17.8	20.74
KRG97105	Soybean	nucleus	18.96	20.37
KRH77618	Soybean	nucleus	19.25	19.97
KRH27868	Soybean	nucleus	18.96	19.58
KRH47994	Soybean	nucleus	18.52	19.51
KRH06548	Soybean	nucleus	18.52	19.42

Protein Annotations

EMBL:ACUP02001288	EnsemblPlants:KRH73733	EnsemblPlantsGene:GLYMA_02G290700	EntrezGene:100799140	ncoils:Coil	PANTHER:PTHR31071
PANTHER:PTHR31071:SF2	ProteinID:KRH73733	ProteinID:KRH73733.1	UniParc:UPI0002336F15	UniProt:I1JJ88	MapMan:35.1

Description

hypothetical protein

Coordinates

chr2:-:47021251..47025852

Molecular Weight (calculated)

77827.7 Da

IEP (calculated)

7.570

GRAVY (calculated)

-0.881

Length

691 amino acids

Sequence
(BLAST)

001: MKYSGKGSLP AGIASRSVNN NPSPDSDLEP AKPFQRWKPR TPGTRLRRHG GKRSRPETPL LKWKIHDDPL EDDRKSSVAG SRRRTCRSAK KQAEVAVSAR
101: RLAAGLWRLH LPETAANDDR KGLEHKHGIG HAGLQFLGHP NGMTHGSDMK KNPSQSPRSI FGTKNGHFCE PECFQFSNNE MEGATKWDPL CSKTADEAQH
201: IYSHMKHVDQ KASAVSVISA LGAELEQART RIQELETEHH SSKKKLEHFL KKVSEERAQW KSKEHEKIRA YIDDIKAELN QERKNRQRIE IVNSRLVNEL
301: ADVKLSAKRY MLDYEKERKA RELIEEVCDE LAKEIGEDKA EVEALKRESM KFREEVEEER KMLQMAEVWR EERVQMKLID AKVALEEKYS QMNKLVAELE
401: SFIRSKSAEP NTMEMKEAQS LQQAAAAMNI QDIKGFSYEP PNSDDIFAIF EDANFGEANE REIEPCVSHS PASLASNIHM VSPEANAISK GGIQRHSDVF
501: LDDNGDIEGD ESGWETVSHV EDQGSSYSPE GSTRSLNRNH RESNVSGRSV LEWEETAGEE TPITEISEVC SIPTKQAKKV SSITRLWRST YPNNGDNYKI
601: ISVEGMNGRL SNGMLSNGGI MSPDHGSGKG GLSPQDLLYQ LSPESGSPHA HRGMKGCIPR TVQKNSLKAR LMEARMESQK VQLRHVLKQK I

Best Arabidopsis Sequence Match ( AT1G50660.1 )
(BLAST)

001: MKVTGKPYST ATLPAFESDK NLFSHGPDLR AIQRATTVTK RRARNPSLTR QRRSGPSGGR RSRPETPLLK WKVEDRNKER SGVVEDDDYE DDNHQVARSE
101: TTRRKDRRKI ARPVSVRKLA AGLWRLQVPD ASSSGGERKG KEGLGFQGNG GYMGVPYLYH HSDKPSGGQS NKIRQNPSTI ATTKNGFLCK LEPSMPFPHS
201: AMEGATKWDP VCLDTMEEVH QIYSNMKRID QQVNAVSLVS SLEAELEEAH ARIEDLESEK RSHKKKLEQF LRKVSEERAA WRSREHEKVR AIIDDMKTDM
301: NREKKTRQRL EIVNHKLVNE LADSKLAVKR YMQDYEKERK ARELIEEVCD ELAKEIGEDK AEIEALKRES MSLREEVDDE RRMLQMAEVW REERVQMKLI
401: DAKVALEERY SQMNKLVGDL ESFLRSRDIV TDVKEVREAE LLRETAASVN IQEIKEFTYV PANPDDIYAV FEEMNLGEAH DREMEKSVAY SPISHDSKVH
501: TVSLDANMMN KKGRHSDAYT HQNGDIEEDD SGWETVSHLE EQGSSYSPDG SIPSVNNKNH NHRHSNASSG GTESLGKVWD DTMTPTTEIS EVCSIPRRSS
601: KKVSSIAKLW RSTGASNGDR DSNYKVISME GMNGGRVSNG RKSSAGMVSP DRVSSKGGFS PMMDLVGQWN SSPESANHPH VNRGGMKGCI EWPRGAQKSS
701: LKSKLIEARI ESQKVQLKHV LKQRI

Arabidopsis Description

Actin cytoskeleton-regulatory complex pan-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LPT5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.