CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
extracellular 1
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG92440
KRG93968
KRG96225
KRH07089
KRH10674
KRH13893
KRH13899
KRH21674
KRH22265
KRH25284
KRH25797
KRH27067
KRH27396
KRH30384
KRH34357
KRH36899
KRH43397
KRH43461
KRH53869
KRH54704
KRH55721
KRH58237
KRH59546
KRH63230
KRH67971

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G22310.1	KRH22265	AT1G06390.1	21798944
AT5G22310.1	KRH25797	AT1G06390.1	21798944
AT5G22310.1	KRH27067	AT1G06390.1	21798944
AT5G22310.1	KRH55721	AT1G06390.1	21798944
AT5G22310.1	KRG93968	AT3G01690.1	21798944
AT5G22310.1	KRH07089	AT3G01690.1	21798944
AT5G22310.1	KRH58237	AT3G01690.1	21798944
AT5G22310.1	KRG96225	AT3G11590.1	21798944
AT5G22310.1	KRH67971	AT3G11590.1	21798944
AT5G22310.1	KRH36899	AT3G18710.1	21798944
AT5G22310.1	KRH43397	AT3G18710.1	21798944
AT5G22310.1	KRH53869	AT3G18710.1	21798944
AT5G22310.1	KRH59546	AT3G18710.1	21798944
AT5G22310.1	KRG92440	AT3G22960.1	21798944
AT5G22310.1	KRH34357	AT3G22960.1	21798944
AT5G22310.1	KRH10674	AT4G33690.1	21798944
AT5G22310.1	KRH21674	AT4G33690.1	21798944
AT5G22310.1	KRH25284	AT5G22310.1	21798944
AT5G22310.1	KRH30384	AT5G22310.1	21798944
AT5G22310.1	KRH13893	AT5G58950.1	21798944
AT5G22310.1	KRH13899	AT5G58950.1	21798944
AT5G22310.1	KRH27396	AT5G58950.1	21798944
AT5G22310.1	KRH43461	AT5G58950.1	21798944
AT5G22310.1	KRH54704	AT5G61010.1	21798944
AT5G22310.1	KRH63230	AT5G61010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH30384	Soybean	plastid	92.41	91.99
VIT_06s0080g00930.t01	Wine grape	plastid	50.38	50.92
Solyc11g068720.1.1	Tomato	nucleus	43.7	45.43
PGSC0003DMT400067737	Potato	nucleus	39.0	45.01
KRG96225	Soybean	nucleus	42.03	42.29
KRH67971	Soybean	plastid	41.73	41.67
Solyc06g074190.2.1	Tomato	nucleus	32.63	39.67
PGSC0003DMT400015076	Potato	nucleus	33.38	38.66
Bra006620.1-P	Field mustard	nucleus	24.73	36.14
AT5G22310.1	Thale cress	nucleus	26.25	35.97
CDX92367	Canola	mitochondrion, plastid	25.8	35.42
CDY67997	Canola	mitochondrion, plastid	25.19	35.24
CDX88802	Canola	nucleus	24.73	34.83
CDX70996	Canola	nucleus	24.89	34.53
Bra002404.1-P	Field mustard	nucleus	25.19	34.3
GSMUA_Achr6P16290_001	Banana	nucleus	29.89	31.93
GSMUA_Achr6P08260_001	Banana	nucleus	24.58	28.27
Os04t0382800-00	Rice	nucleus	24.28	28.02
TraesCS7D01G134000.1	Wheat	nucleus	24.58	27.98
TraesCS2B01G299400.1	Wheat	nucleus, plastid	23.52	27.83
TraesCS7A01G134600.1	Wheat	nucleus	24.43	27.81
Os02t0506100-00	Rice	plastid	18.36	27.75
Zm00001d025208_P002	Maize	nucleus	24.58	27.65
EES11990	Sorghum	nucleus	23.82	27.64
TraesCS2D01G281000.1	Wheat	nucleus, plastid	23.67	27.56
TraesCS2A01G282200.1	Wheat	nucleus	23.67	27.56
KRH20862	Soybean	cytosol	11.23	27.51
HORVU2Hr1G069400.8	Barley	nucleus	21.24	27.5
TraesCS7B01G035800.1	Wheat	nucleus	23.98	27.34
Zm00001d003996_P001	Maize	nucleus	23.52	27.24
KXG30263	Sorghum	mitochondrion	24.13	25.56
Zm00001d000402_P001	Maize	mitochondrion	20.79	25.0
KRH11424	Soybean	nucleus, plastid	14.57	24.94
KRG98777	Soybean	nucleus	23.22	21.89
KRH14411	Soybean	nucleus	22.91	21.88
KRH73733	Soybean	nucleus	22.91	21.85
KRH02074	Soybean	plastid	13.81	21.46
KRH46168	Soybean	nucleus	22.61	21.32
KRH51081	Soybean	plastid	14.42	21.25
KRH06548	Soybean	nucleus	20.49	20.49
KRH47994	Soybean	nucleus	20.18	20.27
KRH27868	Soybean	nucleus	20.49	20.18
KRH77618	Soybean	nucleus	19.88	19.67
KRH68854	Soybean	nucleus	17.6	19.56
KRH36516	Soybean	plastid	16.39	18.49
KRG97105	Soybean	nucleus	17.91	18.35
KRH11499	Soybean	plastid	17.3	16.96

Protein Annotations

EMBL:ACUP02007228	EnsemblPlants:KRH25284	EnsemblPlantsGene:GLYMA_12G092200	EntrezGene:100780458	ncoils:Coil	PANTHER:PTHR31071
PANTHER:PTHR31071:SF16	ProteinID:KRH25284	ProteinID:KRH25284.1	SEG:seg	UniParc:UPI000233C5D1	UniProt:K7LTV9
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr12:+:7545266..7548844

Molecular Weight (calculated)

74762.0 Da

IEP (calculated)

8.420

GRAVY (calculated)

-0.962

Length

659 amino acids

Sequence
(BLAST)

001: MPSSHYTTTN NNLNNKTRKR GCSSSSSSSL VRRYRFKRAI LVGKKGGSST PVPMWKTNTS SSPSVPTQRQ QQQQQHHTKP LLHSSGSMLP SKDKELSVSA
101: RKLAATLWEI NDLPPSRVKK EFEVDPMRGC KEKVRSREKK GVGLSRSGLL RPQMSDPSHS PASERMKGLE GGSCKRRVSR FSHQLLSGDY YLDALDAHSS
201: ANFIEEVENQ LRSKKNRGKG TGDVRNRLKE ARSGLSTSKK LLKVLSQMCL REQQASSMPL VLALGSELDR VCHQIDQLIH EQCSNQNDIE YVMKHFAEEK
301: AAWKRKERER IHHAIKHVAE ELAVEKKLRR QTERLNKKIA KEMASVKASH LKASKEIERE KRAKEILEQI CDELAKGIGE DRAQVEELKR ESAKVREEVE
401: KEREMLQLAD VLREERVQMK LSEAKYQFEE KNAFLEKLRT ELEDFMRTKD GQNEDVSPEC KKIKDLESYF KNVCWGFQNA EKEDDSDVEN DVGHEGDDDS
501: DDSDLHSIEL NMDDDSKGYK WSFACENVGQ DKRFSIDKES IGRKSFSEKI LWGSICFNKG TSSGRKRDFS INIQEVSDHF DPDRSIEFLS QATLQDDKDE
601: TQSNRSNKGL QDTVSCANSD KRNNLLLALQ CAGGEAGENA LALEGDNLKQ EVAGKKSGC

Best Arabidopsis Sequence Match ( AT3G11590.1 )
(BLAST)

001: MPRQNQSVEN LLLLGKIRKR GCSSPTSSTS SILREGYRFK RAIVVGKRGG STTPVPTWRL MGRSPSPRAS GALHAAASPS SHCGSKTGKV SAPAPVSARK
101: LAATLWEMNE MPSPRVVEEA APMIRKSRKE RIAPLPPPRS SVHSGSLPPH LSDPSHSPVS ERMERSGTGS RQRRASSTVQ KLRLGDCNVG ARDPINSGSF
201: MDIETRSRVE TPTGSTVGVK TRLKDCSNAL TTSKELLKII NRMWGQDDRP SSSMSLVSAL HSELERARLQ VNQLIHEHKP ENNDISYLMK RFAEEKAVWK
301: SNEQEVVEAA IESVAGELEV ERKLRRRFES LNKKLGKELA ETKSALMKAV KEIENEKRAR VMVEKVCDEL ARDISEDKAE VEELKRESFK VKEEVEKERE
401: MLQLADALRE ERVQMKLSEA KHQLEEKNAA VDKLRNQLQT YLKAKRCKEK TREPPQTQLH NEEAGDYLNH HISFGSYNIE DGEVENGNEE GSGESDLHSI
501: ELNIDNKSYK WPYGEENRGR KSTPRKSLSL QRSISDCVDW VVQSEKLQKS GDGGLDWGRS IDVEPKGYID ETQAYKPNKA SSKDHHILSG SRLSNFRGGS
601: VSKSRLSDAS KGENQNARKS RW

Arabidopsis Description

At3g11590/F24K9_26 [Source:UniProtKB/TrEMBL;Acc:Q9CAW9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.