CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG94975
KRH08190
KRH18664
KRH28715
KRH31638
KRH69070
KRH69884
KRH76747

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G06390.1	KRH08190	AT3G50910.1	21798944
AT1G06390.1	KRH28715	AT3G50910.1	21798944
AT1G06390.1	KRH69884	AT3G50910.1	21798944
AT1G06390.1	KRH76747	AT3G50910.1	21798944
AT2G30980.1	KRG89812	AT2G41090.1	17360592
AT2G30980.1	KRG94975	AT2G41090.1	17360592
AT2G30980.1	KRH18664	AT2G41090.1	17360592
AT2G30980.1	KRG89812	AT2G41100.1	17360592
AT2G30980.1	KRG94975	AT2G41100.1	17360592
AT2G30980.1	KRH18664	AT2G41100.1	17360592
AT2G30980.1	KRH31638	AT4G14640.1	17360592
AT2G30980.1	KRH69070	AT4G14640.1	17360592
AT2G30980.1	KRG89812	AT5G21274.1	17360592
AT2G30980.1	KRG94975	AT5G21274.1	17360592
AT2G30980.1	KRH18664	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH55721	Soybean	cytosol	97.38	97.61
CDY66894	Canola	cytosol	81.43	91.44
Os01t0205700-01	Rice	cytosol	49.52	89.27
KRH61707	Soybean	cytosol	79.52	87.89
Bra021685.1-P	Field mustard	cytosol	85.48	87.56
CDX97773	Canola	cytosol	85.48	87.56
AT1G06390.1	Thale cress	cytosol	84.76	87.47
KRH21245	Soybean	cytosol	77.86	87.43
KRH52380	Soybean	cytosol	78.81	87.11
KRH11042	Soybean	cytosol	78.33	86.58
AT2G30980.1	Thale cress	cytosol	84.76	86.41
TraesCS3A01G136500.1	Wheat	cytosol	76.9	85.45
Bra018285.1-P	Field mustard	cytosol	70.0	83.29
Os05t0207500-01	Rice	cytosol	79.29	82.84
TraesCS1B01G142300.1	Wheat	cytosol	78.81	82.34
TraesCS1D01G129000.2	Wheat	cytosol	78.81	82.34
TraesCS1A01G125000.1	Wheat	cytosol	78.57	82.09
EES00093	Sorghum	cytosol	78.33	81.44
PGSC0003DMT400052647	Potato	cytosol	84.05	81.34
CDY10766	Canola	extracellular, plasma membrane, vacuole	43.33	81.25
KRH27067	Soybean	cytosol	78.81	80.93
Solyc07g055200.2.1	Tomato	cytosol	84.05	80.78
Zm00001d008893_P001	Maize	cytosol	77.86	80.54
KRH22265	Soybean	cytosol	79.76	80.34
HORVU3Hr1G026020.3	Barley	mitochondrion	77.14	78.26
TraesCS3D01G137200.1	Wheat	cytosol	74.29	77.81
KRH42881	Soybean	cytosol	70.24	77.02
KRH58985	Soybean	cytosol	70.0	76.76
Zm00001d039407_P001	Maize	cytosol	77.86	76.22
KRG96686	Soybean	cytosol	71.9	74.38
KRH68409	Soybean	cytosol	71.9	74.38
KRH33767	Soybean	cytosol	71.9	73.66
KRH31752	Soybean	cytosol	71.43	73.35
KRG90477	Soybean	cytosol	71.9	70.89
HORVU6Hr1G046490.1	Barley	cytosol	20.95	69.84
KRH69166	Soybean	cytosol	72.38	67.41
HORVU6Hr1G008360.2	Barley	mitochondrion, peroxisome, plasma membrane	35.95	67.11
KRH26299	Soybean	cytosol	66.9	66.9
KRH06055	Soybean	cytosol	66.43	66.43
KRH21176	Soybean	cytosol	39.52	63.85
KRH40543	Soybean	mitochondrion	69.29	63.26
HORVU2Hr1G051860.1	Barley	cytosol	25.24	63.1
KRH48234	Soybean	cytosol, mitochondrion	70.48	62.98
KRH65140	Soybean	mitochondrion	69.05	61.7
KRH00638	Soybean	mitochondrion	68.1	61.24
KRH62838	Soybean	cytosol, mitochondrion	11.9	60.98
Solyc04g025600.1.1	Tomato	cytosol	15.0	58.88
KRH70115	Soybean	cytosol	47.14	57.06
KRH75231	Soybean	cytosol	12.38	52.0
TraesCS5A01G259000.1	Wheat	endoplasmic reticulum, extracellular, plastid	11.9	43.48
TraesCS1B01G361800.1	Wheat	endoplasmic reticulum, extracellular, plastid	11.67	42.61
KRH58078	Soybean	cytosol	1.9	42.11
TraesCS5B01G230700.1	Wheat	endoplasmic reticulum, extracellular, plastid	11.67	41.88
TraesCS4A01G365100.1	Wheat	endoplasmic reticulum, extracellular, plastid	11.43	41.03
KRH12527	Soybean	cytosol, endoplasmic reticulum, plasma membrane	21.43	39.65
KRH32741	Soybean	mitochondrion	18.57	34.36
KRH28388	Soybean	cytosol	24.52	30.93
KRH77093	Soybean	nucleus	24.52	30.93
KRH04448	Soybean	nucleus	24.05	29.11
KRH04471	Soybean	nucleus	25.0	26.38
KRH58068	Soybean	mitochondrion	25.24	25.79
KRH58076	Soybean	endoplasmic reticulum	23.57	25.26

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100810924	MapMan:11.3.2.3	MapMan:18.4.3.4	Gene3D:3.30.200.20	EMBL:ACUP02007327
EnsemblPlantsGene:GLYMA_12G129600	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	UniProt:I1LSH6	InterPro:IPR000719
EnsemblPlants:KRH25797	ProteinID:KRH25797	ProteinID:KRH25797.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24057	PANTHER:PTHR24057:SF12	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000233CB9B	SEG:seg	:

Description

hypothetical protein

Coordinates

chr12:+:14402324..14407760

Molecular Weight (calculated)

47536.6 Da

IEP (calculated)

8.472

GRAVY (calculated)

-0.285

Length

420 amino acids

Sequence
(BLAST)

001: MASLPLGHHH HHHKPAAAAI HPSQPPQSQP QPEVPRRSSD METDKDMSAT VIEGNDAVTG HIISTTIGGK NGEPKETISY MAERVVGTGS FGVVFQAKCL
101: ETGEAVAIKK VLQDRRYKNR ELQLMRLMDH PNVISLKHCF FSTTSRDELF LNLVMEYVPE SMYRVIKHYT TMNQRMPLIY VKLYTYQIFR GLAYIHTALG
201: VCHRDVKPQN LLVHPLTHQV KLCDFGSAKV LVKGESNISY ICSRYYRAPE LIFGATEYTA SIDIWSAGCV LAELLLGQPL FPGENQVDQL VEIIKVLGTP
301: TREEIRCMNP NYTEFRFPQI KAHPWHKVFH KRMPPEAIDL ASRLLQYSPS LRCTALEACA HPFFDELREP NARLPNGRPL PPLFNFKQEL AGASPELINR
401: LIPEHIRRQM GLSFPHSAGT

Best Arabidopsis Sequence Match ( AT2G30980.1 )
(BLAST)

001: MTSIPLGPPQ PPSLAPQPPH LHGGDSLKRR PDIDNDKEMS AAVIEGNDAV TGHIISTTIG GKNGEPKQTI SYMAERVVGT GSFGIVFQAK CLETGESVAI
101: KKVLQDRRYK NRELQLMRLM DHPNVVSLKH CFFSTTTRDE LFLNLVMEYV PETLYRVLKH YTSSNQRMPI FYVKLYTYQI FRGLAYIHTA PGVCHRDVKP
201: QNLLVDPLTH QCKLCDFGSA KVLVKGEANI SYICSRYYRA PELIFGATEY TSSIDIWSAG CVLAELLLGQ PLFPGENSVD QLVEIIKVLG TPTREEIRCM
301: NPNYTDFRFP QIKAHPWHKV FHKRMPPEAI DLASRLLQYS PSLRCTALEA CAHPFFNELR EPNARLPNGR PLPPLFNFKQ ELSGASPELI NRLIPEHVRR
401: QMNGGFPFQA GP

Arabidopsis Description

ASK6SKdZeta [Source:UniProtKB/TrEMBL;Acc:A0A178W1X9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.