Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX73678
CDX92401
CDX95314
CDY06478
CDY23174

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G30980.1 CDX73678 AT3G51920.1 17360592
AT2G30980.1 CDX95314 AT3G51920.1 17360592
AT2G30980.1 CDY23174 AT3G51920.1 17360592
AT2G30980.1 CDY06478 AT4G14640.1 17360592
AT2G30980.1 CDX92401 AT5G21274.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra021685.1-P Field mustard cytosol 100.0 100.0
CDY66894 Canola cytosol 90.98 99.73
AT2G30980.1 Thale cress cytosol 93.66 93.2
CDY52692 Canola cytosol, mitochondrion, nucleus 25.12 91.15
CDX78886 Canola cytosol 79.76 87.43
CDY70859 Canola cytosol 79.51 87.17
Os01t0205700-01 Rice cytosol 49.51 87.12
CDY69647 Canola cytosol 71.95 86.76
CDY64921 Canola cytosol 79.02 86.63
CDY34051 Canola cytosol 79.76 86.05
CDX99437 Canola cytosol 79.76 85.83
KRH25797 Soybean cytosol 87.56 85.48
KRH55721 Soybean cytosol 87.32 85.44
TraesCS3A01G136500.1 Wheat cytosol 77.8 84.39
CDY10766 Canola extracellular, plasma membrane, vacuole 45.37 83.04
CDY62551 Canola cytosol 52.93 82.2
Os05t0207500-01 Rice cytosol 80.49 82.09
TraesCS1D01G129000.2 Wheat cytosol 80.24 81.84
TraesCS1B01G142300.1 Wheat cytosol 80.24 81.84
TraesCS1A01G125000.1 Wheat cytosol 80.0 81.59
KRH27067 Soybean cytosol 80.0 80.2
EES00093 Sorghum cytosol 78.54 79.7
KRH22265 Soybean cytosol 80.73 79.38
PGSC0003DMT400052647 Potato cytosol 83.66 79.03
Zm00001d008893_P001 Maize cytosol 77.8 78.57
Solyc07g055200.2.1 Tomato cytosol 83.41 78.26
HORVU3Hr1G026020.3 Barley mitochondrion 78.29 77.54
TraesCS3D01G137200.1 Wheat cytosol 74.88 76.56
Zm00001d039407_P001 Maize cytosol 78.29 74.83
CDX70574 Canola cytosol 74.63 74.82
CDX78587 Canola cytosol 74.63 74.63
CDX88238 Canola cytosol 72.44 73.7
CDX80585 Canola cytosol 71.95 73.38
CDY19757 Canola cytosol 72.2 72.91
CDX87033 Canola cytosol 72.2 72.91
CDY05202 Canola cytosol 72.2 72.2
CDX74129 Canola cytosol 71.95 71.78
CDY49981 Canola cytosol 71.95 71.78
HORVU6Hr1G046490.1 Barley cytosol 21.95 71.43
CDY18828 Canola cytosol 67.8 68.81
HORVU6Hr1G008360.2 Barley mitochondrion, peroxisome, plasma membrane 37.56 68.44
CDY72370 Canola cytosol 17.56 67.92
HORVU2Hr1G051860.1 Barley cytosol 26.34 64.29
CDX93471 Canola cytosol 63.66 62.59
CDX94939 Canola cytosol 63.66 62.59
CDY65729 Canola plastid 63.9 62.23
CDY31060 Canola plastid 63.66 62.0
CDX91895 Canola mitochondrion 68.54 60.3
CDY45686 Canola mitochondrion 63.17 59.95
CDX67856 Canola mitochondrion 63.17 59.95
CDX74346 Canola cytosol, mitochondrion 68.29 59.83
Solyc04g025600.1.1 Tomato cytosol 15.61 59.81
CDY07202 Canola mitochondrion 68.54 59.66
CDY52332 Canola mitochondrion 63.17 59.27
CDY51144 Canola mitochondrion 69.02 59.2
CDY65303 Canola mitochondrion 62.44 58.58
CDY27737 Canola cytosol 72.2 57.59
CDX77348 Canola plastid 23.66 55.43
CDX78658 Canola cytosol, nucleus, peroxisome 66.1 47.71
TraesCS5A01G259000.1 Wheat endoplasmic reticulum, extracellular, plastid 12.44 44.35
TraesCS1B01G361800.1 Wheat endoplasmic reticulum, extracellular, plastid 12.2 43.48
TraesCS5B01G230700.1 Wheat endoplasmic reticulum, extracellular, plastid 11.95 41.88
TraesCS4A01G365100.1 Wheat endoplasmic reticulum, extracellular, plastid 11.71 41.03
CDY70654 Canola cytosol 16.1 38.37
CDX83104 Canola cytosol 25.61 31.91
CDY30613 Canola cytosol 25.85 31.83
CDY57680 Canola cytosol 25.85 31.83
CDY57359 Canola cytosol 25.61 31.63
CDX98044 Canola cytosol 11.46 29.38
CDX76880 Canola cytosol, mitochondrion 24.63 29.11
CDY71648 Canola plastid 10.73 27.33
CDY38928 Canola plastid 24.88 25.44
CDX89544 Canola plastid 25.85 25.42
CDY49445 Canola plastid 25.12 24.47
CDY67469 Canola vacuole 15.37 21.5
CDY29766 Canola golgi, plasma membrane 18.05 20.9
CDY15289 Canola vacuole 13.9 20.65
CDY25489 Canola golgi, plasma membrane 16.1 13.58
Protein Annotations
Gene3D:1.10.510.10MapMan:11.3.2.3MapMan:18.4.3.4Gene3D:3.30.200.20GO:A0A078EEH0EnsemblPlants:CDX97773
ProteinID:CDX97773ProteinID:CDX97773.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00105053001
InterPro:IPR000719InterPro:Kinase-like_dom_sfPFAM:PF00069ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011
PANTHER:PTHR24057PANTHER:PTHR24057:SF12InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_ASUniParc:UPI00025449A6SEG:seg:::
Description
BnaC04g41660D
Coordinates
chrLK031901:+:260165..263478
Molecular Weight (calculated)
46284.9 Da
IEP (calculated)
8.597
GRAVY (calculated)
-0.300
Length
410 amino acids
Sequence
(BLAST)
001: MTSLSLGPQP PATAQPPQLR DGDASRRRSD MDTDKDMSAA VIEGNDAVTG HIISTTIGGK NGEPKQTISY MAERVVGQGS FGIVFQAKCL ETGESVAIKK
101: VLQDRRYKNR ELQLMRLMDH PNVVSLKHCF FSTTSRDELF LNLVMEYVPE TLYRVLKHYT SSSQRMPIFY VKLYTYQIFR GLAYIHTVPG VCHRDVKPQN
201: LLVDPLTHQC KLCDFGSAKV LVKGEANISY ICSRYYRAPE LIFGATEYTS SIDIWSAGCV LAELLLGQPL FPGENSVDQL VEIIKVLGTP TREEIRCMNP
301: NYTDFRFPQI KAHPWHKVFH KRMPPEAIDL ASRLLQYSPS LRYTALEACA HPFFNELREP NARLPNGRPL PALFNFKQEL AGASPELINR LIPEHIRRQM
401: SGGFPSQPGH
Best Arabidopsis Sequence Match ( AT2G30980.1 )
(BLAST)
001: MTSIPLGPPQ PPSLAPQPPH LHGGDSLKRR PDIDNDKEMS AAVIEGNDAV TGHIISTTIG GKNGEPKQTI SYMAERVVGT GSFGIVFQAK CLETGESVAI
101: KKVLQDRRYK NRELQLMRLM DHPNVVSLKH CFFSTTTRDE LFLNLVMEYV PETLYRVLKH YTSSNQRMPI FYVKLYTYQI FRGLAYIHTA PGVCHRDVKP
201: QNLLVDPLTH QCKLCDFGSA KVLVKGEANI SYICSRYYRA PELIFGATEY TSSIDIWSAG CVLAELLLGQ PLFPGENSVD QLVEIIKVLG TPTREEIRCM
301: NPNYTDFRFP QIKAHPWHKV FHKRMPPEAI DLASRLLQYS PSLRCTALEA CAHPFFNELR EPNARLPNGR PLPPLFNFKQ ELSGASPELI NRLIPEHVRR
401: QMNGGFPFQA GP
Arabidopsis Description
ASK6SKdZeta [Source:UniProtKB/TrEMBL;Acc:A0A178W1X9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.