CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0205700-01	Rice	cytosol	77.88	37.77
CDY10766	Canola	extracellular, plasma membrane, vacuole	68.14	34.38
CDY66894	Canola	cytosol	91.15	27.54
CDY69647	Canola	cytosol	78.76	26.18
CDX97773	Canola	cytosol	91.15	25.12
CDX78886	Canola	cytosol	79.65	24.06
CDY70859	Canola	cytosol	79.65	24.06
CDY64921	Canola	cytosol	78.76	23.8
CDY34051	Canola	cytosol	78.76	23.42
CDX99437	Canola	cytosol	78.76	23.36
TraesCS3A01G136500.1	Wheat	cytosol	77.88	23.28
Os05t0207500-01	Rice	cytosol	81.42	22.89
TraesCS1B01G142300.1	Wheat	cytosol	79.65	22.39
TraesCS1D01G129000.2	Wheat	cytosol	79.65	22.39
TraesCS1A01G125000.1	Wheat	cytosol	78.76	22.14
TraesCS3D01G137200.1	Wheat	cytosol	77.88	21.95
Solyc04g025600.1.1	Tomato	cytosol	20.35	21.5
PGSC0003DMT400052647	Potato	cytosol	82.3	21.43
EES00093	Sorghum	cytosol	76.11	21.29
Solyc07g055200.2.1	Tomato	cytosol	82.3	21.28
HORVU3Hr1G026020.3	Barley	mitochondrion	77.88	21.26
Zm00001d008893_P001	Maize	cytosol	76.11	21.18
CDY62551	Canola	cytosol	48.67	20.83
Zm00001d039407_P001	Maize	cytosol	76.11	20.05
CDX70574	Canola	cytosol	70.8	19.56
CDX78587	Canola	cytosol	70.8	19.51
CDX74129	Canola	cytosol	68.14	18.73
CDY49981	Canola	cytosol	68.14	18.73
CDY05202	Canola	cytosol	67.26	18.54
CDX88238	Canola	cytosol	65.49	18.36
CDY19757	Canola	cytosol	65.49	18.23
CDX87033	Canola	cytosol	65.49	18.23
CDX80585	Canola	cytosol	64.6	18.16
CDX93471	Canola	cytosol	66.37	17.99
CDX94939	Canola	cytosol	66.37	17.99
CDY31060	Canola	plastid	66.37	17.81
CDY65729	Canola	plastid	66.37	17.81
CDX91895	Canola	mitochondrion	70.8	17.17
CDY18828	Canola	cytosol	61.06	17.08
CDX67856	Canola	mitochondrion	64.6	16.9
CDY45686	Canola	mitochondrion	64.6	16.9
CDX74346	Canola	cytosol, mitochondrion	69.91	16.88
CDY70654	Canola	cytosol	25.66	16.86
CDY51144	Canola	mitochondrion	70.8	16.74
CDY65303	Canola	mitochondrion	64.6	16.7
CDY52332	Canola	mitochondrion	64.6	16.7
CDY07202	Canola	mitochondrion	69.03	16.56
CDY71648	Canola	plastid	21.24	14.91
CDX77348	Canola	plastid	23.01	14.86
CDY27737	Canola	cytosol	67.26	14.79
CDY57680	Canola	cytosol	25.66	8.71
CDX78658	Canola	cytosol, nucleus, peroxisome	43.36	8.63
CDY72370	Canola	cytosol	7.96	8.49
CDY30613	Canola	cytosol	24.78	8.41
CDX83104	Canola	cytosol	23.89	8.21
CDY57359	Canola	cytosol	23.89	8.13
CDX76880	Canola	cytosol, mitochondrion	23.01	7.49
CDX89544	Canola	plastid	23.89	6.47
CDY49445	Canola	plastid	23.01	6.18
HORVU6Hr1G008360.2	Barley	mitochondrion, peroxisome, plasma membrane	11.5	5.78
CDY38928	Canola	plastid	20.35	5.74
TraesCS1B01G361800.1	Wheat	endoplasmic reticulum, extracellular, plastid	3.54	3.48
TraesCS5A01G259000.1	Wheat	endoplasmic reticulum, extracellular, plastid	3.54	3.48
TraesCS4A01G365100.1	Wheat	endoplasmic reticulum, extracellular, plastid	3.54	3.42
TraesCS5B01G230700.1	Wheat	endoplasmic reticulum, extracellular, plastid	3.54	3.42
CDY29766	Canola	golgi, plasma membrane	7.08	2.26
CDY25489	Canola	golgi, plasma membrane	8.85	2.06
CDY15289	Canola	vacuole	3.54	1.45
CDY67469	Canola	vacuole	3.54	1.37
HORVU6Hr1G046490.1	Barley	cytosol	0.0	0.0
HORVU2Hr1G051860.1	Barley	cytosol	0.0	0.0
CDX98044	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDY52692	EnsemblPlantsGene:GSBRNA2T00007602001	Gene3D:1.10.510.10	InterPro:Kinase-like_dom_sf	PANTHER:PTHR24057	PANTHER:PTHR24057:SF12
ProteinID:CDY52692	ProteinID:CDY52692.1	SUPFAM:SSF56112	UniParc:UPI0004EE00BF	UniProt:A0A078IRU0	MapMan:50.2.7

Description

BnaC04g54320DBnaC04g54320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IRU0]

Coordinates

chrLK033118:-:28314..30261

Molecular Weight (calculated)

13027.8 Da

IEP (calculated)

9.848

GRAVY (calculated)

-0.516

Length

113 amino acids

Sequence
(BLAST)

001: MNPNYTDFRF PQIKAHPWHK VFHKRMPPET IDLASRLLQY SPSLRCTALE ACAHPFFSEL REPNARLPNG RPLPPLFNFK QELSGASLEL IDRLIPEHVR
101: RQMSGGFPLQ AGH

Best Arabidopsis Sequence Match ( AT1G06390.1 )
(BLAST)

001: MASLPLGPQP HALAPPLQLH DGDALKRRPE LDSDKEMSAA VIEGNDAVTG HIISTTIGGK NGEPKQTISY MAERVVGTGS FGIVFQAKCL ETGESVAIKK
101: VLQDRRYKNR ELQLMRPMDH PNVISLKHCF FSTTSRDELF LNLVMEYVPE TLYRVLRHYT SSNQRMPIFY VKLYTYQIFR GLAYIHTVPG VCHRDVKPQN
201: LLVDPLTHQV KLCDFGSAKV LVKGEPNISY ICSRYYRAPE LIFGATEYTA SIDIWSAGCV LAELLLGQPL FPGENSVDQL VEIIKVLGTP TREEIRCMNP
301: NYTDFRFPQI KAHPWHKVFH KRMPPEAIDL ASRLLQYSPS LRCTALEACA HPFFNELREP NARLPNGRPL PPLFNFKQEL GGASMELINR LIPEHVRRQM
401: STGLQNS

Arabidopsis Description

ASK9SK22 [Source:UniProtKB/TrEMBL;Acc:A0A178WCN5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.