CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67469	Canola	vacuole	95.29	89.76
CDX98044	Canola	cytosol	33.7	58.12
CDY29766	Canola	golgi, plasma membrane	72.83	56.78
Os03t0762000-01	Rice	plastid	29.35	55.86
CDY57359	Canola	cytosol	66.67	55.42
CDX83104	Canola	cytosol	65.94	55.32
CDY30613	Canola	cytosol	66.67	55.26
CDY57680	Canola	cytosol	65.94	54.65
PGSC0003DMT400064191	Potato	cytosol	63.41	52.55
Solyc03g044140.2.1	Tomato	cytosol, nucleus	63.04	52.25
Solyc02g092640.2.1	Tomato	cytosol, nucleus	63.04	52.25
KRH28388	Soybean	cytosol	63.04	52.25
EER97857	Sorghum	cytosol	62.68	52.11
Os07t0114400-01	Rice	plasma membrane	62.68	51.95
KRH77093	Soybean	nucleus	62.68	51.95
TraesCS2D01G260500.1	Wheat	cytosol	62.32	51.65
GSMUA_Achr5P01690_001	Banana	cytosol	62.32	51.65
HORVU2Hr1G063420.1	Barley	cytosol	62.32	51.65
Zm00001d007951_P001	Maize	cytosol, nucleus	61.96	51.51
GSMUA_Achr10P...	Banana	cytosol	61.96	51.35
GSMUA_Achr6P16850_001	Banana	cytosol	61.96	51.35
TraesCS2A01G263400.1	Wheat	cytosol, nucleus	62.32	50.29
CDY70654	Canola	cytosol	30.43	48.84
Os03t0207300-01	Rice	cytosol	58.33	48.49
TraesCS4B01G254800.1	Wheat	cytosol	57.25	48.02
TraesCS4A01G049900.1	Wheat	cytosol	57.61	47.89
TraesCS4D01G254600.1	Wheat	cytosol	57.61	47.89
HORVU4Hr1G069390.1	Barley	cytosol	57.25	47.59
CDX76880	Canola	cytosol, mitochondrion	59.78	47.55
AT3G50000.1	Thale cress	golgi, plasma membrane, vacuole	68.84	47.15
Zm00001d034125_P002	Maize	mitochondrion, plastid	63.77	45.71
EER90840	Sorghum	plastid	63.77	45.71
Zm00001d013217_P001	Maize	cytosol	63.41	45.69
Zm00001d018669_P004	Maize	cytosol	61.96	45.48
KRH04471	Soybean	nucleus	64.86	44.97
TraesCS5A01G400100.1	Wheat	cytosol, mitochondrion	61.96	44.88
TraesCS5D01G410000.1	Wheat	plastid	61.96	44.88
HORVU5Hr1G097230.1	Barley	cytosol, plastid	61.96	44.76
TraesCS5B01G404900.1	Wheat	cytosol, mitochondrion	61.59	44.62
VIT_07s0129g00410.t01	Wine grape	golgi, plasma membrane	64.86	44.2
KRH58068	Soybean	mitochondrion	65.22	43.8
TraesCS2B01G278700.2	Wheat	cytosol	57.61	42.06
CDY38928	Canola	plastid	60.87	41.9
CDY49445	Canola	plastid	61.59	40.38
CDX89544	Canola	plastid	60.87	40.29
CDY71648	Canola	plastid	17.75	30.43
CDY25489	Canola	golgi, plasma membrane	49.28	27.98
CDX80585	Canola	cytosol	24.64	16.92
CDX88238	Canola	cytosol	24.64	16.87
CDY19757	Canola	cytosol	24.64	16.75
CDX87033	Canola	cytosol	24.28	16.5
CDY05202	Canola	cytosol	23.55	15.85
CDY49981	Canola	cytosol	23.55	15.82
CDX74129	Canola	cytosol	23.55	15.82
CDX70574	Canola	cytosol	23.19	15.65
CDY10766	Canola	extracellular, plasma membrane, vacuole	12.68	15.62
CDX78587	Canola	cytosol	23.19	15.61
CDY18828	Canola	cytosol	22.46	15.35
CDY34051	Canola	cytosol	20.29	14.74
CDY69647	Canola	cytosol	18.12	14.71
CDY66894	Canola	cytosol	19.57	14.44
CDY07202	Canola	mitochondrion	24.64	14.44
CDX91895	Canola	mitochondrion	24.28	14.38
CDX74346	Canola	cytosol, mitochondrion	24.28	14.32
CDX99437	Canola	cytosol	19.57	14.17
CDY64921	Canola	cytosol	19.2	14.17
CDY70859	Canola	cytosol	19.2	14.17
CDX78886	Canola	cytosol	19.2	14.17
CDY72370	Canola	cytosol	5.43	14.15
CDY51144	Canola	mitochondrion	24.28	14.02
CDX97773	Canola	cytosol	20.65	13.9
CDY65303	Canola	mitochondrion	21.74	13.73
CDX77348	Canola	plastid	8.7	13.71
CDX93471	Canola	cytosol	20.65	13.67
CDX94939	Canola	cytosol	20.65	13.67
CDY52332	Canola	mitochondrion	21.38	13.5
CDX67856	Canola	mitochondrion	21.01	13.43
CDY45686	Canola	mitochondrion	21.01	13.43
CDY31060	Canola	plastid	20.29	13.3
CDY65729	Canola	plastid	20.29	13.3
CDY27737	Canola	cytosol	23.55	12.65
CDX78658	Canola	cytosol, nucleus, peroxisome	21.74	10.56
CDY62551	Canola	cytosol	9.42	9.85
CDY52692	Canola	cytosol, mitochondrion, nucleus	1.45	3.54

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	GO:A0A078FQY5	UniProt:A0A078FQY5	EnsemblPlants:CDY15289
ProteinID:CDY15289	ProteinID:CDY15289.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00085522001	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	PFscan:PS50011	PFscan:PS51257	PANTHER:PTHR24054
PANTHER:PTHR24054:SF33	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI0004EE2A1A	SEG:seg	:	:	:

Description

BnaC06g07750DBnaC06g07750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FQY5]

Coordinates

chrLK032053:+:262255..263960

Molecular Weight (calculated)

31858.3 Da

IEP (calculated)

6.863

GRAVY (calculated)

-0.233

Length

276 amino acids

Sequence
(BLAST)

001: MRLITSSSSS SYFPFASLLR VLLLCGAIFI SCALSAHSPT SPSTVVTNGS SFDPHLDPYS LDDEISLRTM MSKAHVYTDV NVIRPKEYWD YESVNVDWGE
101: QNDYEVVRKV GKGKYSEVFE GINMNSNEKC IIKILKLVKK RKIRREIKIL QNLCGGPNIV KLLDVALDYC HSQDWSLAEF YHPGKEYNVR VVSRYFKEHE
201: LLVDLQDYDY SLDMWSLGCM FAGMIFRKEP FFYGHDNQDQ LVKIAKIPGT DELNAYLNKY QLELDAQLAL KRRFLL

Best Arabidopsis Sequence Match ( AT2G23070.1 )
(BLAST)

001: MALRPCTGFT ISSLRNASAA NNNLFSLLSF SSSSPAKRNL LLSSLQDNLR RFASSASLYR QHLRNQQQQH QQQQQSRVKE KSETLAQKIG KSIRRAGAPS
101: KARVYADVNV VRPKDYWDYE SLAVQWGVQD DYEVVRKVGR GKYSEVFEGI HATDNEKCVI KILKPVKKKK IKREIKILQN LCGGPNIVKL LDIVRDQQSK
201: TPSLIFEHVN NKDFKVLYPT LSDYDVRYYI FELLKALDFC HSRGIMHRDV KPHNVMIDHE QRKLRLIDWG LAEFYHPGKE YNVRVASRYF KGPELLVDLQ
301: DYDYSLDLWS LGCMFAGMIF RKEPFFYGHD NYDQLVKIAK VLGTDELNAY LNKYRIELDP NLTSLVGRHS RKPWTKFINS ENQHLAVPEA VDFVDKLLRY
401: DHQERPTAKE AMAHPYFYPI RNAESSRTPR SQ

Arabidopsis Description

CKA4Casein kinase II subunit alpha-4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64816]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.