CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 6
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER91910
EES01631
EES09201
EES13385
EES16322
KXG36270
KXG37587
KXG37588
OQU78227
OQU82060

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G23080.1	EES01631	AT2G41090.1	17360592
AT2G23080.1	EES09201	AT2G41090.1	17360592
AT2G23080.1	EES16322	AT2G41090.1	17360592
AT2G23080.1	OQU78227	AT2G41090.1	17360592
AT2G23080.1	EES01631	AT2G41100.1	17360592
AT2G23080.1	EES09201	AT2G41100.1	17360592
AT2G23080.1	EES16322	AT2G41100.1	17360592
AT2G23080.1	OQU78227	AT2G41100.1	17360592
AT2G23080.1	KXG37587	AT4G14640.1	17360592
AT2G23080.1	KXG37588	AT4G14640.1	17360592
AT2G23080.1	EES01631	AT5G21274.1	17360592
AT2G23080.1	EES09201	AT5G21274.1	17360592
AT2G23080.1	EES16322	AT5G21274.1	17360592
AT2G23080.1	OQU78227	AT5G21274.1	17360592
AT5G67380.1	EES13385	AT2G46830.1	14978263
AT5G67380.1	EES13385	AT2G46830.1	9724822
AT5G67380.1	EER91910	AT3G60250.1	10535927
AT5G67380.1	KXG36270	AT3G60250.1	10535927
AT5G67380.1	OQU82060	AT3G60250.1	10535927
AT5G67380.1	EER91910	AT5G47080.1	10535927
AT5G67380.1	KXG36270	AT5G47080.1	10535927
AT5G67380.1	OQU82060	AT5G47080.1	10535927

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER97857	Sorghum	cytosol	84.16	97.59
GSMUA_Achr5P01690_001	Banana	cytosol	82.34	95.2
KRH28388	Soybean	cytosol	82.08	94.89
KRH77093	Soybean	nucleus	81.82	94.59
Solyc03g044140.2.1	Tomato	cytosol, nucleus	81.82	94.59
Zm00001d034125_P002	Maize	mitochondrion, plastid	93.51	93.51
PGSC0003DMT400064191	Potato	cytosol	80.78	93.39
Solyc02g092640.2.1	Tomato	cytosol, nucleus	80.52	93.09
Zm00001d013217_P001	Maize	cytosol	92.21	92.69
CDY30613	Canola	cytosol	80.0	92.49
CDY57359	Canola	cytosol	79.74	92.47
Bra029986.1-P	Field mustard	cytosol	78.96	92.4
CDX83104	Canola	cytosol	78.96	92.4
CDY57680	Canola	cytosol	79.74	92.19
VIT_18s0001g09320.t01	Wine grape	cytosol	79.22	91.59
CDY70654	Canola	cytosol	40.52	90.7
AT2G23080.1	Thale cress	cytosol	77.92	90.09
HORVU5Hr1G097230.1	Barley	cytosol, plastid	89.35	90.05
TraesCS5A01G400100.1	Wheat	cytosol, mitochondrion	89.09	90.03
TraesCS5D01G410000.1	Wheat	plastid	88.83	89.76
TraesCS5B01G404900.1	Wheat	cytosol, mitochondrion	88.57	89.5
KRH04471	Soybean	nucleus	84.68	81.91
VIT_07s0129g00410.t01	Wine grape	golgi, plasma membrane	84.16	80.0
CDX98044	Canola	cytosol	33.25	80.0
Bra036044.1-P	Field mustard	plasma membrane	80.26	79.43
KRH58068	Soybean	mitochondrion	84.42	79.08
Bra036806.1-P	Field mustard	cytosol	69.09	78.93
AT3G50000.1	Thale cress	golgi, plasma membrane, vacuole	81.3	77.67
AT5G67380.1	Thale cress	golgi, plasma membrane	81.82	77.02
Bra031829.1-P	Field mustard	cytosol	52.21	73.36
CDY67469	Canola	vacuole	49.87	65.53
Os03t0762000-01	Rice	plastid	24.68	65.52
KXG37490	Sorghum	mitochondrion	69.61	65.21
CDY71648	Canola	plastid	27.01	64.6
CDY15289	Canola	vacuole	45.71	63.77
CDY29766	Canola	golgi, plasma membrane	57.4	62.43
CDY25489	Canola	golgi, plasma membrane	51.43	40.74
EES00093	Sorghum	cytosol	28.83	27.48
EES00498	Sorghum	cytosol	27.53	25.98
KXG32345	Sorghum	cytosol	27.01	25.68
EES06566	Sorghum	cytosol	27.79	25.66
EES18967	Sorghum	plastid	27.01	25.24
EER90544	Sorghum	cytosol	27.01	24.41
EER92044	Sorghum	cytosol, mitochondrion	27.79	22.77
EER89533	Sorghum	mitochondrion	2.08	6.72

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.9.1	Gene3D:3.30.200.20	EntrezGene:8085835	UniProt:C5X044	EnsemblPlants:EER90840
ProteinID:EER90840	ProteinID:EER90840.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24054
PANTHER:PTHR24054:SF33	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	EnsemblPlantsGene:SORBI_3001G080700	SUPFAM:SSF56112
unigene:Sbi.21124	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A822EE	RefSeq:XP_002463842.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:+:6233845..6241226

Molecular Weight (calculated)

44281.5 Da

IEP (calculated)

9.178

GRAVY (calculated)

-0.361

Length

385 amino acids

Sequence
(BLAST)

001: MIGAPPPWNR LPTGIAKPAA AAAVVVAALA SSFLALPRPR AAAPPPAGSG PLMSKARVYT DVNVLRPKEY WDYEALTVQW GEQDDYEVVR KVGRGKYSEV
101: FEGINVNNNE KCIIKILKPV KKKKIKREIK ILQNLCGGPN IVKLLDIVRD QHSKTPSLIF EFVNNTDFKV LYPTLTDYDI RYYIYELLKA LDYCHSQGIM
201: HRDVKPHNVM IDHELRKLRL IDWGLAEFYH PGKEYNVRVA SRYFKGPELL VDLQDYDYSL DMWSLGCMFA GMIFRKEPFF YGHDNHDQLV KIAKVLGTDG
301: LNAYLNKYHI ELDPQLEALV GRHSRKPWAK FINADNQHLV SPEAIDFLDK LLRYDHQDRL TAREAMAHPY FLQVRAVENS RSRPQ

Best Arabidopsis Sequence Match ( AT5G67380.1 )
(BLAST)

001: MIDTLFFLFF LFFDSPLRRL LLLCAVLALR APTAHSPILR SSIVTPTARA VSEVSGCTTI DPDFLVEISD SNQTRAMSKA RVYTEVNVIR PKDYWDYESL
101: IVQWGEQDDY EVVRKVGRGK YSEVFEGINV NSKEKCIIKI LKPVKKKKIR REIKILQNLC GGPNIVKLLD VVRDQHSKTP SLIFEYVNST DFKVLYPTLT
201: DYDIRYYIYE LLKALDFCHS QGIMHRDVKP HNVMIDHELR KLRLIDWGLA EFYHPGKEYN VRVASRYFKG PELLVDLQDY DYSLDMWSLG CMFAGMIFRK
301: EPFFYGHDNQ DQLVKIAKVL GTDELNAYLN KYQLELDPQL EALVGRHSRK PWSKFINADN QHLVSPEAID FLDKLLRYDH QDRLTAKEAM AHAYFAQVRA
401: AETSRMRSQ

Arabidopsis Description

CKA1Casein kinase II subunit alpha-1 [Source:UniProtKB/Swiss-Prot;Acc:Q08467]
SUBAcon: [plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.