CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028053_P001	Maize	mitochondrion	100.0	100.0
EES06566	Sorghum	cytosol	10.08	2.88
EER90544	Sorghum	cytosol	10.08	2.82
EES00093	Sorghum	cytosol	9.24	2.72
EES00498	Sorghum	cytosol	8.4	2.45
EER97857	Sorghum	cytosol	6.72	2.41
EER92044	Sorghum	cytosol, mitochondrion	8.4	2.13
EER90840	Sorghum	plastid	6.72	2.08
KXG32345	Sorghum	cytosol	6.72	1.98
EES18967	Sorghum	plastid	6.72	1.94
KXG37490	Sorghum	mitochondrion	5.04	1.46
Os01t0252200-01	Rice	nucleus	0.84	0.6

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.2	EntrezGene:8065731	UniProt:C5Z7Y2	EnsemblPlants:EER89533	ProteinID:EER89533
ProteinID:EER89533.1	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005762	GO:GO:0005840	PFAM:PF05047
PANTHER:PTHR21396	InterPro:Ribosome/NADH_DH	SMART:SM00916	EnsemblPlantsGene:SORBI_3010G103900	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI0001A899B4	RefSeq:XP_002438166.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:9762551..9765008

Molecular Weight (calculated)

13762.0 Da

IEP (calculated)

11.225

GRAVY (calculated)

-0.489

Length

119 amino acids

Sequence
(BLAST)

001: MALRGVWQLQ KLVVNYCDWG GSSRGIRAFM EAHLPAFKEK NPHLEVVTEL VRGQHPNLKG IYKNHNERVV CVRNLPPEEI LLQATRLRNS LGRKVVKLRT
101: RHVTKRPSVQ GTWTTELKM

Best Arabidopsis Sequence Match ( AT3G59650.1 )
(BLAST)

001: MALRGVWQLK KLVVSYCNWG GSSRGIRAFM ESELPALKEK NPQLEVITEL SRGQHPYLKG IYRNRNERVV CVKNMDPEEV LLNATRLRNS LGRKVVKLRT
101: RHVTKHPSVQ GTWTTAVKF

Arabidopsis Description

Mitochondrial ribosomal protein L51/S25/CI-B8 family protein [Source:UniProtKB/TrEMBL;Acc:F4J9E4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.