CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EER91910
EES01631
EES09201
EES13385
EES16322
KXG36270
KXG37587
KXG37588
OQU78227
OQU82060

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G23080.1	EES01631	AT2G41090.1	17360592
AT2G23080.1	EES09201	AT2G41090.1	17360592
AT2G23080.1	EES16322	AT2G41090.1	17360592
AT2G23080.1	OQU78227	AT2G41090.1	17360592
AT2G23080.1	EES01631	AT2G41100.1	17360592
AT2G23080.1	EES09201	AT2G41100.1	17360592
AT2G23080.1	EES16322	AT2G41100.1	17360592
AT2G23080.1	OQU78227	AT2G41100.1	17360592
AT2G23080.1	KXG37587	AT4G14640.1	17360592
AT2G23080.1	KXG37588	AT4G14640.1	17360592
AT2G23080.1	EES01631	AT5G21274.1	17360592
AT2G23080.1	EES09201	AT5G21274.1	17360592
AT2G23080.1	EES16322	AT5G21274.1	17360592
AT2G23080.1	OQU78227	AT5G21274.1	17360592
AT5G67380.1	EES13385	AT2G46830.1	14978263
AT5G67380.1	EES13385	AT2G46830.1	9724822
AT5G67380.1	EER91910	AT3G60250.1	10535927
AT5G67380.1	KXG36270	AT3G60250.1	10535927
AT5G67380.1	OQU82060	AT3G60250.1	10535927
AT5G67380.1	EER91910	AT5G47080.1	10535927
AT5G67380.1	KXG36270	AT5G47080.1	10535927
AT5G67380.1	OQU82060	AT5G47080.1	10535927

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G063420.1	Barley	cytosol	98.49	98.2
Os07t0114400-01	Rice	plasma membrane	98.49	98.2
TraesCS2D01G260500.1	Wheat	cytosol	98.49	98.2
GSMUA_Achr5P01690_001	Banana	cytosol	96.08	95.8
TraesCS2A01G263400.1	Wheat	cytosol, nucleus	98.49	95.61
KRH28388	Soybean	cytosol	95.18	94.89
KRH77093	Soybean	nucleus	94.88	94.59
Solyc03g044140.2.1	Tomato	cytosol, nucleus	94.88	94.59
PGSC0003DMT400064191	Potato	cytosol	93.98	93.69
Solyc02g092640.2.1	Tomato	cytosol, nucleus	93.67	93.39
CDY57359	Canola	cytosol	93.07	93.07
Bra029986.1-P	Field mustard	cytosol	92.17	93.01
CDX83104	Canola	cytosol	92.17	93.01
CDY57680	Canola	cytosol	93.07	92.79
CDY30613	Canola	cytosol	93.07	92.79
VIT_18s0001g09320.t01	Wine grape	cytosol	93.07	92.79
CDY70654	Canola	cytosol	47.29	91.28
AT2G23080.1	Thale cress	cytosol	90.06	89.79
EER90840	Sorghum	plastid	97.59	84.16
Zm00001d018669_P004	Maize	cytosol	93.07	82.18
TraesCS2B01G278700.2	Wheat	cytosol	91.57	80.42
CDX98044	Canola	cytosol	38.55	80.0
KRH04471	Soybean	nucleus	95.48	79.65
Bra036044.1-P	Field mustard	plasma membrane	93.07	79.43
Bra036806.1-P	Field mustard	cytosol	80.42	79.23
VIT_07s0129g00410.t01	Wine grape	golgi, plasma membrane	95.48	78.27
KRH58068	Soybean	mitochondrion	95.48	77.13
AT3G50000.1	Thale cress	golgi, plasma membrane, vacuole	93.37	76.92
AT5G67380.1	Thale cress	golgi, plasma membrane	93.37	75.79
Bra031829.1-P	Field mustard	cytosol	60.84	73.72
CDY71648	Canola	plastid	31.93	65.84
CDY67469	Canola	vacuole	56.93	64.51
KXG37490	Sorghum	mitochondrion	77.71	62.77
CDY15289	Canola	vacuole	52.11	62.68
CDY29766	Canola	golgi, plasma membrane	65.36	61.3
CDY25489	Canola	golgi, plasma membrane	58.13	39.71
EES00093	Sorghum	cytosol	32.23	26.49
EES00498	Sorghum	cytosol	31.93	25.98
KXG32345	Sorghum	cytosol	31.02	25.43
EES06566	Sorghum	cytosol	31.33	24.94
EES18967	Sorghum	plastid	30.72	24.76
EER90544	Sorghum	cytosol	30.72	23.94
EER92044	Sorghum	cytosol, mitochondrion	31.33	22.13
EER89533	Sorghum	mitochondrion	2.41	6.72

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.9.1	Gene3D:3.30.200.20	EntrezGene:8081615	UniProt:C5X7B1	EnsemblPlants:EER97857
ProteinID:EER97857	ProteinID:EER97857.1	GO:GO:0000003	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009628	GO:GO:0009648	GO:GO:0009791
GO:GO:0009987	GO:GO:0010229	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24054
PANTHER:PTHR24054:SF33	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	EnsemblPlantsGene:SORBI_3002G010300	SUPFAM:SSF56112
unigene:Sbi.14647	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A83662	RefSeq:XP_002461336.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr2:-:982093..988818

Molecular Weight (calculated)

39159.1 Da

IEP (calculated)

8.700

GRAVY (calculated)

-0.528

Length

332 amino acids

Sequence
(BLAST)

001: MSKARVYADV NVLRPKEYWD YEALTVQWGE QDDYEVVRKV GRGKYSEVFE GINVNNNEKC IIKILKPVKK KKIKREIKIL QNLCGGPNIV KLLDIVRDQH
101: SKTPSLIFEY VNNTDFKVLY PTLTDYDIRY YIYELLKALD YCHSQGIMHR DVKPHNVMID HELRKLRLID WGLAEFYHPG KEYNVRVASR YFKGPELLVD
201: LQDYDYSLDM WSLGCMFAGM IFRKEPFFYG HDNHDQLVKI AKVLGTDGLN AYLNKYRIEL DPQLEALVGR HSRKPWSKFI NADNQHLVSP EAIDFLDKLL
301: RYDHQDRLTA REAMAHPYFQ QVRAAENSRT RA

Best Arabidopsis Sequence Match ( AT5G67380.1 )
(BLAST)

001: MIDTLFFLFF LFFDSPLRRL LLLCAVLALR APTAHSPILR SSIVTPTARA VSEVSGCTTI DPDFLVEISD SNQTRAMSKA RVYTEVNVIR PKDYWDYESL
101: IVQWGEQDDY EVVRKVGRGK YSEVFEGINV NSKEKCIIKI LKPVKKKKIR REIKILQNLC GGPNIVKLLD VVRDQHSKTP SLIFEYVNST DFKVLYPTLT
201: DYDIRYYIYE LLKALDFCHS QGIMHRDVKP HNVMIDHELR KLRLIDWGLA EFYHPGKEYN VRVASRYFKG PELLVDLQDY DYSLDMWSLG CMFAGMIFRK
301: EPFFYGHDNQ DQLVKIAKVL GTDELNAYLN KYQLELDPQL EALVGRHSRK PWSKFINADN QHLVSPEAID FLDKLLRYDH QDRLTAKEAM AHAYFAQVRA
401: AETSRMRSQ

Arabidopsis Description

CKA1Casein kinase II subunit alpha-1 [Source:UniProtKB/Swiss-Prot;Acc:Q08467]
SUBAcon: [plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.