Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- endoplasmic reticulum 4
- plasma membrane 5
- vacuole 4
- golgi 5
- extracellular 4
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH28388 | Soybean | cytosol | 82.91 | 99.1 |
| KRH77093 | Soybean | nucleus | 82.66 | 98.8 |
| GSMUA_Achr6P16850_001 | Banana | cytosol | 80.9 | 96.7 |
| PGSC0003DMT400064191 | Potato | cytosol | 80.15 | 95.8 |
| Solyc03g044140.2.1 | Tomato | cytosol, nucleus | 80.15 | 95.8 |
| GSMUA_Achr10P... | Banana | cytosol | 80.15 | 95.8 |
| Os07t0114400-01 | Rice | plasma membrane | 79.9 | 95.5 |
| Solyc02g092640.2.1 | Tomato | cytosol, nucleus | 79.9 | 95.5 |
| GSMUA_Achr5P01690_001 | Banana | cytosol | 79.9 | 95.5 |
| EER97857 | Sorghum | cytosol | 79.65 | 95.48 |
| CDY30613 | Canola | cytosol | 79.65 | 95.2 |
| CDY57359 | Canola | cytosol | 79.4 | 95.18 |
| HORVU2Hr1G063420.1 | Barley | cytosol | 79.4 | 94.89 |
| TraesCS2D01G260500.1 | Wheat | cytosol | 79.4 | 94.89 |
| Bra029986.1-P | Field mustard | cytosol | 78.39 | 94.83 |
| CDX83104 | Canola | cytosol | 78.39 | 94.83 |
| CDY57680 | Canola | cytosol | 79.15 | 94.59 |
| Zm00001d007951_P001 | Maize | cytosol, nucleus | 78.14 | 93.67 |
| TraesCS2A01G263400.1 | Wheat | cytosol, nucleus | 80.4 | 93.57 |
| KRH58068 | Soybean | mitochondrion | 96.48 | 93.43 |
| CDY70654 | Canola | cytosol | 40.2 | 93.02 |
| AT2G23080.1 | Thale cress | cytosol | 77.39 | 92.49 |
| Os03t0207300-01 | Rice | cytosol | 74.37 | 89.16 |
| TraesCS4D01G254600.1 | Wheat | cytosol | 73.37 | 87.95 |
| TraesCS4B01G254800.1 | Wheat | cytosol | 72.61 | 87.84 |
| HORVU4Hr1G069390.1 | Barley | cytosol | 73.12 | 87.65 |
| TraesCS4A01G049900.1 | Wheat | cytosol | 72.86 | 87.35 |
| VIT_07s0129g00410.t01 | Wine grape | golgi, plasma membrane | 88.44 | 86.91 |
| EER90840 | Sorghum | plastid | 81.91 | 84.68 |
| Bra036044.1-P | Field mustard | plasma membrane | 82.16 | 84.06 |
| TraesCS5D01G410000.1 | Wheat | plastid | 79.9 | 83.46 |
| TraesCS5A01G400100.1 | Wheat | cytosol, mitochondrion | 79.9 | 83.46 |
| HORVU5Hr1G097230.1 | Barley | cytosol, plastid | 79.9 | 83.25 |
| TraesCS5B01G404900.1 | Wheat | cytosol, mitochondrion | 79.65 | 83.2 |
| KRH04448 | Soybean | nucleus | 72.36 | 83.0 |
| Zm00001d034125_P002 | Maize | mitochondrion, plastid | 80.15 | 82.86 |
| Zm00001d013217_P001 | Maize | cytosol | 79.65 | 82.77 |
| AT3G50000.1 | Thale cress | golgi, plasma membrane, vacuole | 83.17 | 82.13 |
| AT5G67380.1 | Thale cress | golgi, plasma membrane | 84.17 | 81.91 |
| CDX98044 | Canola | cytosol | 32.41 | 80.62 |
| Bra036806.1-P | Field mustard | cytosol | 67.84 | 80.12 |
| Zm00001d018669_P004 | Maize | cytosol | 75.38 | 79.79 |
| TraesCS2B01G278700.2 | Wheat | cytosol | 74.62 | 78.57 |
| Bra031829.1-P | Field mustard | cytosol | 51.01 | 74.09 |
| KRH58076 | Soybean | endoplasmic reticulum | 70.6 | 71.68 |
| KRH58078 | Soybean | cytosol | 3.27 | 68.42 |
| CDY71648 | Canola | plastid | 27.14 | 67.08 |
| CDY67469 | Canola | vacuole | 49.25 | 66.89 |
| CDY15289 | Canola | vacuole | 44.97 | 64.86 |
| CDY29766 | Canola | golgi, plasma membrane | 57.04 | 64.12 |
| Os03t0762000-01 | Rice | plastid | 22.61 | 62.07 |
| CDY25489 | Canola | golgi, plasma membrane | 50.5 | 41.36 |
| KRH62838 | Soybean | cytosol, mitochondrion | 7.29 | 35.37 |
| KRH31752 | Soybean | cytosol | 27.14 | 26.41 |
| KRH33767 | Soybean | cytosol | 27.14 | 26.34 |
| KRH11042 | Soybean | cytosol | 25.13 | 26.32 |
| KRH21245 | Soybean | cytosol | 24.62 | 26.2 |
| KRG96686 | Soybean | cytosol | 26.63 | 26.11 |
| KRH61707 | Soybean | cytosol | 24.87 | 26.05 |
| KRH52380 | Soybean | cytosol | 24.87 | 26.05 |
| KRH68409 | Soybean | cytosol | 26.38 | 25.86 |
| KRH27067 | Soybean | cytosol | 26.38 | 25.67 |
| KRH22265 | Soybean | cytosol | 26.88 | 25.66 |
| KRG90477 | Soybean | cytosol | 27.39 | 25.59 |
| KRH25797 | Soybean | cytosol | 26.38 | 25.0 |
| KRH55721 | Soybean | cytosol | 25.88 | 24.58 |
| KRH26299 | Soybean | cytosol | 25.63 | 24.29 |
| KRH06055 | Soybean | cytosol | 25.63 | 24.29 |
| KRH69166 | Soybean | cytosol | 27.39 | 24.17 |
| KRH42881 | Soybean | cytosol | 23.12 | 24.02 |
| KRH58985 | Soybean | cytosol | 23.12 | 24.02 |
| KRH48234 | Soybean | cytosol, mitochondrion | 27.64 | 23.4 |
| KRH65140 | Soybean | mitochondrion | 27.14 | 22.98 |
| KRH75231 | Soybean | cytosol | 5.53 | 22.0 |
| KRH40543 | Soybean | mitochondrion | 25.38 | 21.96 |
| KRH00638 | Soybean | mitochondrion | 25.38 | 21.63 |
| KRH21176 | Soybean | cytosol | 13.57 | 20.77 |
| KRH12527 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 9.55 | 16.74 |
| KRH70115 | Soybean | cytosol | 14.32 | 16.43 |
| KRH32741 | Soybean | mitochondrion | 7.54 | 13.22 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.3.9.1 | Gene3D:3.30.200.20 | EMBL:ACUP02010419 | EnsemblPlantsGene:GLYMA_17G163700 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 |
| GO:GO:0016740 | GO:GO:0019538 | UniProt:I1MVP2 | InterPro:IPR000719 | EnsemblPlants:KRH04471 | ProteinID:KRH04471 |
| ProteinID:KRH04471.1 | InterPro:Kinase-like_dom_sf | PFAM:PF00069 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 |
| PANTHER:PTHR24054 | PANTHER:PTHR24054:SF33 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 |
| InterPro:Ser/Thr_kinase_AS | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000233EDBF | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr17:+:14613303..14621128
Molecular Weight (calculated)
46634.3 Da
IEP (calculated)
9.179
GRAVY (calculated)
-0.408
Length
398 amino acids
Sequence
(BLAST)
(BLAST)
001: MRIAHEAPAA LLLRFLLVCT IVALRAPVAQ PPILRIPNHL IETTNTFTIV HQRYRTQISG SNRRAMSKAR VYTDVNVLRP KEYWDYESLT VQWGDQDDYE
101: VVRKVGRGKY SEVFEGINVN SNERCVIKIL KPVKKKKIKR EIKILQNLCG GPNIVKLLDI VRDQHSKTPS LIFEYVNSTD FKVLYPTLTD YDIRYYIYEL
201: LKALDYCHSQ GIMHRDVKPH NVMIDHELRK LRLIDWGLAE FYHPGKEYNV RVASRYFKGP ELLVDLQDYD YSLDMWSLGC MFAGMIFRKE PFFYGHDNHD
301: QLVKIAKVLG TDELNAYLNK YHLELDPQLD ALVGRHSRKP WSKFINADNQ HLVSPEAIDF LDKLLRYDHQ DRLTAREAMA HPYFSQVRAA ESSRMRTQ
101: VVRKVGRGKY SEVFEGINVN SNERCVIKIL KPVKKKKIKR EIKILQNLCG GPNIVKLLDI VRDQHSKTPS LIFEYVNSTD FKVLYPTLTD YDIRYYIYEL
201: LKALDYCHSQ GIMHRDVKPH NVMIDHELRK LRLIDWGLAE FYHPGKEYNV RVASRYFKGP ELLVDLQDYD YSLDMWSLGC MFAGMIFRKE PFFYGHDNHD
301: QLVKIAKVLG TDELNAYLNK YHLELDPQLD ALVGRHSRKP WSKFINADNQ HLVSPEAIDF LDKLLRYDHQ DRLTAREAMA HPYFSQVRAA ESSRMRTQ
001: MIDTLFFLFF LFFDSPLRRL LLLCAVLALR APTAHSPILR SSIVTPTARA VSEVSGCTTI DPDFLVEISD SNQTRAMSKA RVYTEVNVIR PKDYWDYESL
101: IVQWGEQDDY EVVRKVGRGK YSEVFEGINV NSKEKCIIKI LKPVKKKKIR REIKILQNLC GGPNIVKLLD VVRDQHSKTP SLIFEYVNST DFKVLYPTLT
201: DYDIRYYIYE LLKALDFCHS QGIMHRDVKP HNVMIDHELR KLRLIDWGLA EFYHPGKEYN VRVASRYFKG PELLVDLQDY DYSLDMWSLG CMFAGMIFRK
301: EPFFYGHDNQ DQLVKIAKVL GTDELNAYLN KYQLELDPQL EALVGRHSRK PWSKFINADN QHLVSPEAID FLDKLLRYDH QDRLTAKEAM AHAYFAQVRA
401: AETSRMRSQ
101: IVQWGEQDDY EVVRKVGRGK YSEVFEGINV NSKEKCIIKI LKPVKKKKIR REIKILQNLC GGPNIVKLLD VVRDQHSKTP SLIFEYVNST DFKVLYPTLT
201: DYDIRYYIYE LLKALDFCHS QGIMHRDVKP HNVMIDHELR KLRLIDWGLA EFYHPGKEYN VRVASRYFKG PELLVDLQDY DYSLDMWSLG CMFAGMIFRK
301: EPFFYGHDNQ DQLVKIAKVL GTDELNAYLN KYQLELDPQL EALVGRHSRK PWSKFINADN QHLVSPEAID FLDKLLRYDH QDRLTAKEAM AHAYFAQVRA
401: AETSRMRSQ
Arabidopsis Description
CKA1Casein kinase II subunit alpha-1 [Source:UniProtKB/Swiss-Prot;Acc:Q08467]
SUBAcon: [golgi,plasma membrane]
SUBAcon: [golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.