Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G254600.1 | Wheat | cytosol | 91.87 | 91.87 |
| TraesCS4A01G049900.1 | Wheat | cytosol | 91.87 | 91.87 |
| TraesCS4B01G254800.1 | Wheat | cytosol | 90.96 | 91.79 |
| HORVU4Hr1G069390.1 | Barley | cytosol | 91.57 | 91.57 |
| Os07t0114400-01 | Rice | plasma membrane | 89.76 | 89.49 |
| GSMUA_Achr10P... | Banana | cytosol | 89.76 | 89.49 |
| VIT_18s0001g09320.t01 | Wine grape | cytosol | 89.46 | 89.19 |
| GSMUA_Achr6P16850_001 | Banana | cytosol | 89.46 | 89.19 |
| KRH28388 | Soybean | cytosol | 88.86 | 88.59 |
| KRH77093 | Soybean | nucleus | 88.55 | 88.29 |
| Solyc03g044140.2.1 | Tomato | cytosol, nucleus | 88.25 | 87.99 |
| CDY57359 | Canola | cytosol | 87.95 | 87.95 |
| CDY30613 | Canola | cytosol | 87.95 | 87.69 |
| Solyc02g092640.2.1 | Tomato | cytosol, nucleus | 87.65 | 87.39 |
| PGSC0003DMT400064191 | Potato | cytosol | 87.65 | 87.39 |
| CDX83104 | Canola | cytosol | 86.14 | 86.93 |
| Bra029986.1-P | Field mustard | cytosol | 86.14 | 86.93 |
| CDY57680 | Canola | cytosol | 87.05 | 86.79 |
| AT2G23080.1 | Thale cress | cytosol | 84.94 | 84.68 |
| CDY70654 | Canola | cytosol | 43.37 | 83.72 |
| Bra036044.1-P | Field mustard | plasma membrane | 87.95 | 75.06 |
| CDX98044 | Canola | cytosol | 35.84 | 74.38 |
| KRH04471 | Soybean | nucleus | 89.16 | 74.37 |
| Bra036806.1-P | Field mustard | cytosol | 75.0 | 73.89 |
| VIT_07s0129g00410.t01 | Wine grape | golgi, plasma membrane | 89.16 | 73.09 |
| AT3G50000.1 | Thale cress | golgi, plasma membrane, vacuole | 87.65 | 72.21 |
| KRH58068 | Soybean | mitochondrion | 89.16 | 72.02 |
| AT5G67380.1 | Thale cress | golgi, plasma membrane | 87.05 | 70.66 |
| Bra031829.1-P | Field mustard | cytosol | 57.53 | 69.71 |
| CDY71648 | Canola | plastid | 29.52 | 60.87 |
| CDY67469 | Canola | vacuole | 53.31 | 60.41 |
| Os03t0763000-01 | Rice | plastid | 74.1 | 60.29 |
| CDY15289 | Canola | vacuole | 48.49 | 58.33 |
| CDY29766 | Canola | golgi, plasma membrane | 61.14 | 57.34 |
| Os03t0762000-01 | Rice | plastid | 24.7 | 56.55 |
| CDY25489 | Canola | golgi, plasma membrane | 55.72 | 38.07 |
| Os01t0205700-01 | Rice | cytosol | 21.99 | 31.33 |
| Os05t0207500-01 | Rice | cytosol | 31.63 | 26.12 |
| Os01t0252100-02 | Rice | cytosol, plasma membrane | 31.02 | 25.25 |
| Os02t0236200-01 | Rice | cytosol | 29.82 | 24.69 |
| Os03t0841800-01 | Rice | mitochondrion | 31.33 | 24.53 |
| Os05t0134000-03 | Rice | cytosol | 29.82 | 24.09 |
| Os06t0547900-02 | Rice | cytosol | 29.22 | 24.07 |
| Os01t0296100-01 | Rice | cytosol | 29.52 | 24.02 |
| Os10t0521700-01 | Rice | cytosol, mitochondrion | 31.63 | 22.39 |
| Os01t0252200-01 | Rice | nucleus | 7.83 | 15.57 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.3.9.1 | Gene3D:3.30.200.20 | EntrezGene:4332003 | ProteinID:ABF94561.1 | ProteinID:BAF11239.1 |
| ProteinID:BAS82878.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 |
| InterPro:Kinase-like_dom_sf | EnsemblPlantsGene:Os03g0207300 | EnsemblPlants:Os03t0207300-01 | PFAM:PF00069 | ScanProsite:PS00107 | ScanProsite:PS00108 |
| PFscan:PS50011 | PANTHER:PTHR24054 | PANTHER:PTHR24054:SF35 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | UniProt:Q10Q71 |
| SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI0000DB48CB | RefSeq:XP_015628436.1 | SEG:seg |
Description
casein kinase II alpha-subunit 3, CK2 alpha-subunit 3, CK2 alpha subunit 3Similar to Casein kinase II alpha subunit. (Os03t0207300-01);Similar to predicted protein. (Os03t0207300-02)
Coordinates
chr3:-:5616064..5620692
Molecular Weight (calculated)
39410.4 Da
IEP (calculated)
8.198
GRAVY (calculated)
-0.495
Length
332 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTARVYADV NVHRPREYWD YEALAVEWGE QDDYEVVRKV GRGKYSEVFE GINVTNDERC IIKILKPVKK KKIKREIKIL QNLCGGPNIV KLHNIVRDQQ
101: SKTPSLIFEY VNSTDFKVLY PTLTDYDIRF YIYELLKALD YCHSQGIMHR DVKPHNVMID HELRKLRLID WGLAEFYFPE KEYNVRVASR YFKGPELLVD
201: FQSYDYSLDM WSLGCMFAGM IFRKEPFFYG HDNHDQLVKI AKVLGTDQLN AYLNKYRIAL DPQLEALIGR HTRKPWSKFI NPENRHLVSP EAIDFLDKLI
301: RFDHHDRLTA REAMAHPYFE QVRAAEDCRM RT
101: SKTPSLIFEY VNSTDFKVLY PTLTDYDIRF YIYELLKALD YCHSQGIMHR DVKPHNVMID HELRKLRLID WGLAEFYFPE KEYNVRVASR YFKGPELLVD
201: FQSYDYSLDM WSLGCMFAGM IFRKEPFFYG HDNHDQLVKI AKVLGTDQLN AYLNKYRIAL DPQLEALIGR HTRKPWSKFI NPENRHLVSP EAIDFLDKLI
301: RFDHHDRLTA REAMAHPYFE QVRAAEDCRM RT
001: MHLIFFFSYF LRRYLLLLCA ILILRAPLAH SLIPPLTCVN TGTVESDVTG IRFDRCLDTD SLAKISLSTV MSKARVYTDV NVIRPKDYWD YESLNVQWGE
101: QDDYEVVRKV GRGKYSEVFE GINMNNNEKC IIKILKPVKK KKIRREIKIL QNLCGGPNIV KLLDVVRDQH SKTPSLIFEY VNSTDFKVLY PTLTDYDIRY
201: YIYELLKALD FCHSQGIMHR DVKPHNVMID HELRKLRLID WGLAEFYHPG KEYNVRVASR YFKGPELLVD LQDYDYSLDM WSLGCMFAGM IFRKEPFFYG
301: HDNQDQLVKI AKVLGTDELN AYLNKYQLEL DTQLEALVGR HSRKPWSKFI NADNRHLVSP EAIDYLDKLL RYDHQDRLTA KEAMAHPYFA QVRAAESSRM
401: RTQ
101: QDDYEVVRKV GRGKYSEVFE GINMNNNEKC IIKILKPVKK KKIRREIKIL QNLCGGPNIV KLLDVVRDQH SKTPSLIFEY VNSTDFKVLY PTLTDYDIRY
201: YIYELLKALD FCHSQGIMHR DVKPHNVMID HELRKLRLID WGLAEFYHPG KEYNVRVASR YFKGPELLVD LQDYDYSLDM WSLGCMFAGM IFRKEPFFYG
301: HDNQDQLVKI AKVLGTDELN AYLNKYQLEL DTQLEALVGR HSRKPWSKFI NADNRHLVSP EAIDYLDKLL RYDHQDRLTA KEAMAHPYFA QVRAAESSRM
401: RTQ
Arabidopsis Description
CKA2Casein kinase II subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:Q08466]
SUBAcon: [plasma membrane,golgi,vacuole]
SUBAcon: [plasma membrane,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.