Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G254600.1 | Wheat | cytosol | 98.49 | 98.49 |
| TraesCS4B01G254800.1 | Wheat | cytosol | 97.29 | 98.18 |
| HORVU4Hr1G069390.1 | Barley | cytosol | 97.89 | 97.89 |
| Os03t0207300-01 | Rice | cytosol | 91.87 | 91.87 |
| GSMUA_Achr6P16850_001 | Banana | cytosol | 88.55 | 88.29 |
| GSMUA_Achr10P... | Banana | cytosol | 87.65 | 87.39 |
| VIT_18s0001g09320.t01 | Wine grape | cytosol | 87.35 | 87.09 |
| Solyc03g044140.2.1 | Tomato | cytosol, nucleus | 87.35 | 87.09 |
| KRH28388 | Soybean | cytosol | 87.05 | 86.79 |
| KRH77093 | Soybean | nucleus | 86.75 | 86.49 |
| CDY57359 | Canola | cytosol | 86.45 | 86.45 |
| Bra029986.1-P | Field mustard | cytosol | 85.54 | 86.32 |
| CDX83104 | Canola | cytosol | 85.54 | 86.32 |
| PGSC0003DMT400064191 | Potato | cytosol | 86.45 | 86.19 |
| Solyc02g092640.2.1 | Tomato | cytosol, nucleus | 86.45 | 86.19 |
| CDY30613 | Canola | cytosol | 86.45 | 86.19 |
| CDY57680 | Canola | cytosol | 86.14 | 85.89 |
| TraesCS2A01G263400.1 | Wheat | cytosol, nucleus | 88.25 | 85.67 |
| CDY70654 | Canola | cytosol | 43.67 | 84.3 |
| AT2G23080.1 | Thale cress | cytosol | 83.73 | 83.48 |
| TraesCS5A01G400100.1 | Wheat | cytosol, mitochondrion | 86.14 | 75.07 |
| Bra036806.1-P | Field mustard | cytosol | 75.0 | 73.89 |
| Bra036044.1-P | Field mustard | plasma membrane | 86.45 | 73.78 |
| CDX98044 | Canola | cytosol | 35.24 | 73.12 |
| KRH04471 | Soybean | nucleus | 87.35 | 72.86 |
| VIT_07s0129g00410.t01 | Wine grape | golgi, plasma membrane | 87.95 | 72.1 |
| AT3G50000.1 | Thale cress | golgi, plasma membrane, vacuole | 87.35 | 71.96 |
| AT5G67380.1 | Thale cress | golgi, plasma membrane | 87.05 | 70.66 |
| KRH58068 | Soybean | mitochondrion | 87.35 | 70.56 |
| Bra031829.1-P | Field mustard | cytosol | 56.63 | 68.61 |
| CDY71648 | Canola | plastid | 29.52 | 60.87 |
| CDY67469 | Canola | vacuole | 52.71 | 59.73 |
| TraesCS5A01G400900.1 | Wheat | mitochondrion, plastid | 73.19 | 58.98 |
| CDY15289 | Canola | vacuole | 47.89 | 57.61 |
| CDY29766 | Canola | golgi, plasma membrane | 59.64 | 55.93 |
| CDY25489 | Canola | golgi, plasma membrane | 54.52 | 37.24 |
| TraesCS3A01G136500.1 | Wheat | cytosol | 30.42 | 26.72 |
| TraesCS3A01G164200.1 | Wheat | cytosol | 30.12 | 24.63 |
| TraesCS1A01G125000.1 | Wheat | cytosol | 29.82 | 24.63 |
| TraesCS1A01G077200.1 | Wheat | cytosol | 29.82 | 24.15 |
| TraesCS1A01G407700.5 | Wheat | cytosol | 30.42 | 23.6 |
| TraesCS4A01G345500.1 | Wheat | cytosol | 30.42 | 23.6 |
| TraesCS4A01G361100.1 | Wheat | cytosol | 28.31 | 23.04 |
| TraesCS1A01G189000.1 | Wheat | cytosol, mitochondrion | 30.42 | 21.54 |
| TraesCS4A01G365100.1 | Wheat | endoplasmic reticulum, extracellular, plastid | 5.42 | 15.38 |
| TraesCS5A01G259000.1 | Wheat | endoplasmic reticulum, extracellular, plastid | 5.12 | 14.78 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.3.9.1 | Gene3D:3.30.200.20 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 |
| InterPro:Kinase-like_dom_sf | PFAM:PF00069 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24054 |
| PANTHER:PTHR24054:SF35 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS |
| EnsemblPlantsGene:TraesCS4A01G049900 | EnsemblPlants:TraesCS4A01G049900.1 | TIGR:cd14132 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr4A:-:40538552..40544144
Molecular Weight (calculated)
39388.3 Da
IEP (calculated)
7.995
GRAVY (calculated)
-0.473
Length
332 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTARVYADV NVRRPRDYWD YEALSVQWGE QDDYEVVRKV GRGKYSEVFE GINVTNDERC IIKILKPVKK KKIKREIKIL QNLCGGPNII KLLNVVRDQQ
101: SKIPSLVFEY VNSTDFKVLY PTFTDYDIRF YIYELLKALD YCHSQGIMHR DVKPHNVMID HELRKLRLID WGLAEFYFPE KEYNVRVASR YFKGPELLVD
201: FQGYDYSLDM WSLGCMFAGM IFRKEPFFYG HDNHDQLFKI AKVLGTDELN AYLVKYRIVL DPQLEALIGR HNRKPWSKFV NAENRHLVSE EAIDFLDKLL
301: RFDHQDRLTA EEAMAHEYFH QVRAAENSRG RT
101: SKIPSLVFEY VNSTDFKVLY PTFTDYDIRF YIYELLKALD YCHSQGIMHR DVKPHNVMID HELRKLRLID WGLAEFYFPE KEYNVRVASR YFKGPELLVD
201: FQGYDYSLDM WSLGCMFAGM IFRKEPFFYG HDNHDQLFKI AKVLGTDELN AYLVKYRIVL DPQLEALIGR HNRKPWSKFV NAENRHLVSE EAIDFLDKLL
301: RFDHQDRLTA EEAMAHEYFH QVRAAENSRG RT
001: MALRPCTGFT ISSLRNASAA NNNLFSLLSF SSSSPAKRNL LLSSLQDNLR RFASSASLYR QHLRNQQQQH QQQQQSRVKE KSETLAQKIG KSIRRAGAPS
101: KARVYADVNV VRPKDYWDYE SLAVQWGVQD DYEVVRKVGR GKYSEVFEGI HATDNEKCVI KILKPVKKKK IKREIKILQN LCGGPNIVKL LDIVRDQQSK
201: TPSLIFEHVN NKDFKVLYPT LSDYDVRYYI FELLKALDFC HSRGIMHRDV KPHNVMIDHE QRKLRLIDWG LAEFYHPGKE YNVRVASRYF KGPELLVDLQ
301: DYDYSLDLWS LGCMFAGMIF RKEPFFYGHD NYDQLVKIAK VLGTDELNAY LNKYRIELDP NLTSLVGRHS RKPWTKFINS ENQHLAVPEA VDFVDKLLRY
401: DHQERPTAKE AMAHPYFYPI RNAESSRTPR SQ
101: KARVYADVNV VRPKDYWDYE SLAVQWGVQD DYEVVRKVGR GKYSEVFEGI HATDNEKCVI KILKPVKKKK IKREIKILQN LCGGPNIVKL LDIVRDQQSK
201: TPSLIFEHVN NKDFKVLYPT LSDYDVRYYI FELLKALDFC HSRGIMHRDV KPHNVMIDHE QRKLRLIDWG LAEFYHPGKE YNVRVASRYF KGPELLVDLQ
301: DYDYSLDLWS LGCMFAGMIF RKEPFFYGHD NYDQLVKIAK VLGTDELNAY LNKYRIELDP NLTSLVGRHS RKPWTKFINS ENQHLAVPEA VDFVDKLLRY
401: DHQERPTAKE AMAHPYFYPI RNAESSRTPR SQ
Arabidopsis Description
CKA4Casein kinase II subunit alpha-4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64816]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.