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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS7A01G299400.3
TraesCS7B01G188000.1
TraesCS7D01G295400.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G60250.1 TraesCS7A01G299400.3 AT2G46830.1 10535927
AT3G60250.1 TraesCS7B01G188000.1 AT2G46830.1 10535927
AT3G60250.1 TraesCS7D01G295400.1 AT2G46830.1 10535927
AT3G60250.1 TraesCS7A01G299400.3 AT2G46830.1 14978263
AT3G60250.1 TraesCS7B01G188000.1 AT2G46830.1 14978263
AT3G60250.1 TraesCS7D01G295400.1 AT2G46830.1 14978263
AT3G60250.1 TraesCS7A01G299400.3 AT2G46830.1 9724822
AT3G60250.1 TraesCS7B01G188000.1 AT2G46830.1 9724822
AT3G60250.1 TraesCS7D01G295400.1 AT2G46830.1 9724822
AT4G17640.1 TraesCS7A01G299400.3 AT2G46830.1 9724822
AT4G17640.1 TraesCS7B01G188000.1 AT2G46830.1 9724822
AT4G17640.1 TraesCS7D01G295400.1 AT2G46830.1 9724822
AT5G47080.1 TraesCS7A01G299400.3 AT2G46830.1 9724822
AT5G47080.1 TraesCS7B01G188000.1 AT2G46830.1 9724822
AT5G47080.1 TraesCS7D01G295400.1 AT2G46830.1 9724822
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G245100.1 Wheat cytosol 99.63 98.89
Zm00001d021557_P001 Maize cytosol 93.68 92.31
KXG36270 Sorghum cytosol 92.94 90.91
Solyc10g061940.1.1 Tomato mitochondrion 39.03 89.74
Os07t0495100-01 Rice cytosol 94.05 87.85
Zm00001d006440_P003 Maize cytosol 92.19 82.12
KRH57540 Soybean nucleus 76.95 79.31
GSMUA_Achr4P30080_001 Banana cytosol 82.53 79.29
GSMUA_Achr4P26360_001 Banana cytosol 81.78 78.57
GSMUA_AchrUn_... Banana cytosol 81.41 78.21
VIT_02s0012g00080.t01 Wine grape cytosol 77.32 78.2
KRH04253 Soybean nucleus 76.58 78.03
KRH77278 Soybean nucleus 79.55 75.09
PGSC0003DMT400004353 Potato cytosol 81.04 74.91
KRH28210 Soybean nucleus 79.55 74.83
Solyc01g088740.2.1 Tomato cytosol 79.55 74.83
Solyc05g050680.2.1 Tomato nucleus 79.18 74.74
Bra003407.1-P Field mustard cytosol 73.98 74.53
CDY64765 Canola cytosol 73.23 73.78
Bra007520.1-P Field mustard cytosol 72.12 73.76
CDY41181 Canola cytosol 72.12 73.76
CDX71824 Canola cytosol 71.38 73.0
PGSC0003DMT400068359 Potato cytosol 77.32 72.98
Solyc06g061000.2.1 Tomato cytosol 77.32 72.73
CDX83421 Canola cytosol 74.35 72.73
Bra000359.1-P Field mustard cytosol 74.35 72.73
CDX95610 Canola cytosol 73.98 72.36
GSMUA_Achr8P14950_001 Banana cytosol 75.84 71.83
KRH57536 Soybean cytosol 68.4 71.6
Bra004856.1-P Field mustard cytosol 69.52 71.37
KRH04249 Soybean nucleus 69.52 71.37
CDX74677 Canola cytosol 70.63 71.16
AT2G44680.1 Thale cress cytosol 74.72 71.02
CDY48249 Canola cytosol 70.63 70.9
CDX78786 Canola cytosol 73.61 70.71
TraesCS2D01G388200.1 Wheat cytosol 72.49 70.4
Bra040171.1-P Field mustard cytosol 73.23 70.11
AT3G60250.1 Thale cress cytosol 71.38 69.57
Bra022101.1-P Field mustard cytosol 70.63 68.59
AT5G47080.1 Thale cress cytosol 72.86 68.29
CDY28980 Canola cytosol 70.26 68.23
CDY38414 Canola cytosol 71.75 67.96
CDY40582 Canola cytosol 69.52 67.75
AT4G17640.1 Thale cress cytosol 70.26 67.02
GSMUA_Achr2P10400_001 Banana cytosol 80.3 66.46
CDX90462 Canola cytosol 69.52 65.61
CDY09612 Canola cytosol 69.52 65.61
CDX77739 Canola cytosol 58.74 63.45
VIT_15s0021g01020.t01 Wine grape cytosol 69.89 61.44
GSMUA_Achr4P17850_001 Banana endoplasmic reticulum, extracellular, plasma membrane 52.04 59.83
PGSC0003DMT400018024 Potato mitochondrion 68.03 59.22
Bra025515.1-P Field mustard cytosol 57.99 57.99
CDY64781 Canola cytosol 57.25 57.89
CDY48948 Canola cytosol 57.62 57.2
Bra025463.1-P Field mustard cytosol 57.25 55.0
Solyc10g061930.1.1 Tomato nucleus 33.46 54.22
GSMUA_Achr4P17860_001 Banana cytosol 31.23 47.73
Bra012652.1-P Field mustard cytosol 54.65 45.09
Protein Annotations
Gene3D:1.10.1820.10MapMan:18.4.3.9.2Gene3D:2.20.25.20InterPro:Casein_kin_II_reg-sub_NInterPro:Casein_kinase_II_beta_likeInterPro:Casein_kinase_II_reg-sub
GO:GO:0003674GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005956GO:GO:0006464
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0019538GO:GO:0019887GO:GO:0030234
InterPro:IPR016149PFAM:PF01214PRINTS:PR00472ScanProsite:PS01101PANTHER:PTHR11740PANTHER:PTHR11740:SF15
SMART:SM01085SUPFAM:SSF57798EnsemblPlantsGene:TraesCS2D01G242000EnsemblPlants:TraesCS2D01G242000.2SEG:seg:
Description
No Description!
Coordinates
chr2D:+:267693819..267702584
Molecular Weight (calculated)
30076.1 Da
IEP (calculated)
5.601
GRAVY (calculated)
-0.535
Length
269 amino acids
Sequence
(BLAST)
001: MYKQGAAGGA GLDRKRISDA LDKHLEKAAA SPSTSRGSAG ARGNHNRVVV PSSIPKGRCS EGESESDSEA SDVSGSDGED TSWISWYCNL RGNEFFCEVD
101: DDYIQDDFNL CGLSSQVPYY DYALDLILDI ESSHGDIFTE EQNELVESAA EMLYGLIHAR YILTSKGLAA MLEKYKNYDF GRCPRVYCCG QPCLPVGQSD
201: IHRSSTVKIY CPKCEDIYYP RSKYQGNIDG AYFGTTFPHL FLMTYDHLKP QKPSQRYVPR VFGFKLHKP
Best Arabidopsis Sequence Match ( AT2G44680.1 )
(BLAST)
001: MYKDRSGGGI MGGGGSSRSE ILGGAIDRKR INDALDKHLK KSSPSTSRVF TSKDKDSVPS TSTAKSQLHS RSPDVESDTD SEGSDVSGSE GDDTSWISWF
101: CNLRGNEFFC EVDEDYIQDD FNLCGLSGQV PYYDYALDLI LDVESSNGDM FTEEQHEMVE SAAEMLYGLI HVRYILTTKG MAAMMEKYKN YDFGRCPRVF
201: CCGQSCLPVG QSDIPRSSTV KIYCPKCEDI YYPRSKYQGN IDGAYFGTTF PHLFLMAYGN MKPQKPAQNY VPKIFGFKVH NKQ
Arabidopsis Description
CKB4Putative casein kinase II subunit beta-4 [Source:UniProtKB/Swiss-Prot;Acc:O80507]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.