Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003407.1-P | Field mustard | cytosol | 94.76 | 94.76 |
| CDY41181 | Canola | cytosol | 89.89 | 91.25 |
| CDX71824 | Canola | cytosol | 88.02 | 89.35 |
| AT3G60250.1 | Thale cress | cytosol | 89.51 | 86.59 |
| CDX74677 | Canola | cytosol | 78.28 | 78.28 |
| CDX83421 | Canola | cytosol | 80.52 | 78.18 |
| CDY48249 | Canola | cytosol | 78.28 | 77.99 |
| CDX95610 | Canola | cytosol | 79.78 | 77.45 |
| Solyc01g088740.2.1 | Tomato | cytosol | 80.9 | 75.52 |
| VIT_02s0012g00080.t01 | Wine grape | cytosol | 74.91 | 75.19 |
| PGSC0003DMT400004353 | Potato | cytosol | 80.15 | 73.54 |
| EER91910 | Sorghum | cytosol | 71.91 | 73.28 |
| TraesCS2D01G242000.2 | Wheat | cytosol | 73.78 | 73.23 |
| TraesCS2A01G245100.1 | Wheat | cytosol | 73.78 | 72.69 |
| Zm00001d021557_P001 | Maize | cytosol | 74.16 | 72.53 |
| KXG36270 | Sorghum | cytosol | 74.16 | 72.0 |
| Solyc05g050680.2.1 | Tomato | nucleus | 76.03 | 71.23 |
| Zm00001d029978_P001 | Maize | cytosol | 58.43 | 70.91 |
| Os10t0564900-01 | Rice | cytosol | 72.28 | 69.18 |
| Os07t0495100-01 | Rice | cytosol | 74.53 | 69.1 |
| HORVU1Hr1G055250.1 | Barley | cytosol | 71.16 | 69.09 |
| TraesCSU01G007300.1 | Wheat | cytosol | 71.16 | 69.09 |
| TraesCS1B01G229200.1 | Wheat | cytosol | 71.16 | 69.09 |
| TraesCS1A01G215700.1 | Wheat | cytosol | 71.16 | 69.09 |
| CDY28980 | Canola | cytosol | 71.54 | 68.95 |
| CDX78786 | Canola | cytosol | 71.91 | 68.57 |
| CDY40582 | Canola | cytosol | 70.79 | 68.48 |
| HORVU2Hr1G092930.1 | Barley | cytosol | 69.29 | 66.79 |
| TraesCS2A01G390500.1 | Wheat | cytosol | 69.29 | 66.79 |
| TraesCS2B01G408900.1 | Wheat | cytosol | 69.29 | 66.79 |
| TraesCS2D01G388200.1 | Wheat | cytosol | 69.29 | 66.79 |
| TraesCSU01G129600.1 | Wheat | cytosol, mitochondrion | 62.92 | 66.4 |
| CDY38414 | Canola | cytosol | 70.41 | 66.2 |
| TraesCS5A01G545600.3 | Wheat | cytosol, mitochondrion | 62.55 | 65.75 |
| Zm00001d006440_P003 | Maize | cytosol | 73.03 | 64.57 |
| OQU82060 | Sorghum | cytosol | 67.04 | 64.39 |
| CDX77739 | Canola | cytosol | 59.93 | 64.26 |
| CDX90462 | Canola | cytosol | 68.16 | 63.86 |
| TraesCS4B01G379300.1 | Wheat | cytosol, mitochondrion | 52.06 | 63.76 |
| CDY09612 | Canola | cytosol | 67.79 | 63.51 |
| Zm00001d002778_P001 | Maize | nucleus | 55.43 | 61.67 |
| HORVU4Hr1G090280.3 | Barley | cytosol | 62.55 | 61.62 |
| PGSC0003DMT400018024 | Potato | mitochondrion | 68.91 | 59.55 |
| CDY64781 | Canola | cytosol | 55.06 | 55.26 |
| GSMUA_Achr4P17850_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 47.94 | 54.7 |
| CDY48948 | Canola | cytosol | 54.31 | 53.51 |
| Zm00001d000052_P004 | Maize | cytosol | 56.55 | 52.25 |
Protein Annotations
| Gene3D:1.10.1820.10 | MapMan:18.4.3.9.2 | Gene3D:2.20.25.20 | GO:A0A078JEB7 | UniProt:A0A078JEB7 | EnsemblPlants:CDY64765 |
| ProteinID:CDY64765 | ProteinID:CDY64765.1 | InterPro:Casein_kin_II_reg-sub_N | InterPro:Casein_kinase_II_beta_like | InterPro:Casein_kinase_II_reg-sub | GO:GO:0003674 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005956 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0019887 | GO:GO:0030234 | GO:GO:0045859 |
| EnsemblPlantsGene:GSBRNA2T00042694001 | InterPro:IPR016149 | PFAM:PF01214 | PRINTS:PR00472 | ScanProsite:PS01101 | PANTHER:PTHR11740 |
| PANTHER:PTHR11740:SF15 | SMART:SM01085 | SUPFAM:SSF57798 | UniParc:UPI0004EEC653 | SEG:seg | : |
Description
BnaC06g42820DCasein kinase II subunit beta [Source:UniProtKB/TrEMBL;Acc:A0A078JEB7]
Coordinates
chrLK034544:+:26353..27954
Molecular Weight (calculated)
29825.9 Da
IEP (calculated)
4.667
GRAVY (calculated)
-0.512
Length
267 amino acids
Sequence
(BLAST)
(BLAST)
001: MYKERSGGGG GGSSRSEILN GAVDRKRIND ALTKKLEKSS PSTSRAFAST AKPQLLDVES ETDSEEGSDV SGSEGDDDTS WISWFCNLRG NDFFCEVDED
101: YIQDDFNLCG LSGQVPYYDY ALDLILDVES SNSEMFTEEQ NELVESAAEM LYGLIHVRYI LTTKGMAAMT EKYKNCDFGR CPRVFCCGQS CLPVGQSDIP
201: RSSTVKIYCP KCEDISYPRS KFQGNIDGAY FGTTFPHLFL MTYGNLKPQK PTQKYVPRIF GFKVHKP
101: YIQDDFNLCG LSGQVPYYDY ALDLILDVES SNSEMFTEEQ NELVESAAEM LYGLIHVRYI LTTKGMAAMT EKYKNCDFGR CPRVFCCGQS CLPVGQSDIP
201: RSSTVKIYCP KCEDISYPRS KFQGNIDGAY FGTTFPHLFL MTYGNLKPQK PTQKYVPRIF GFKVHKP
001: MYKERSGGGG GGSSRSEILG GAIDRKRIND ALNKKLEKSS TSTTTSRVFS SKDKDPFSFT STKTQLPDVE SETDSEGSDV SGSEGDDTSW ISWFCNLRGN
101: DFFCEVDEDY IQDDFNLCGL SGQVPYYDYA LDLILDVDAS NSEMFTDEQH EMVESAAEML YGLIHVRYIL TTKGMAAMTE KYKNCDFGRC PRVFCCGQSC
201: LPVGQSDIPR SSTVKIYCPK CEDISYPRSK FQGNIDGAYF GTTFPHLFLM TYGNLKPQKP TQSYVPKIFG FKVHKP
101: DFFCEVDEDY IQDDFNLCGL SGQVPYYDYA LDLILDVDAS NSEMFTDEQH EMVESAAEML YGLIHVRYIL TTKGMAAMTE KYKNCDFGRC PRVFCCGQSC
201: LPVGQSDIPR SSTVKIYCPK CEDISYPRSK FQGNIDGAYF GTTFPHLFLM TYGNLKPQKP TQSYVPKIFG FKVHKP
Arabidopsis Description
CKB3Casein kinase II subunit beta-3 [Source:UniProtKB/Swiss-Prot;Acc:O81275]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.