Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21789193
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d024546_P001 | |
| Zm00001d049543_P003 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU82060 | Sorghum | cytosol | 92.5 | 79.86 |
| TraesCS2A01G390500.1 | Wheat | cytosol | 85.83 | 74.37 |
| TraesCS2B01G408900.1 | Wheat | cytosol | 85.83 | 74.37 |
| HORVU2Hr1G092930.1 | Barley | cytosol | 85.83 | 74.37 |
| TraesCS2D01G388200.1 | Wheat | cytosol | 85.83 | 74.37 |
| Zm00001d029978_P001 | Maize | cytosol | 64.58 | 70.45 |
| KRH57540 | Soybean | nucleus | 67.08 | 61.69 |
| GSMUA_Achr4P26360_001 | Banana | cytosol | 69.17 | 59.29 |
| GSMUA_AchrUn_... | Banana | cytosol | 69.17 | 59.29 |
| KRH77278 | Soybean | nucleus | 70.0 | 58.95 |
| GSMUA_Achr4P30080_001 | Banana | cytosol | 68.75 | 58.93 |
| KRH28210 | Soybean | nucleus | 70.0 | 58.74 |
| CDY28980 | Canola | cytosol | 67.5 | 58.48 |
| KRH04253 | Soybean | nucleus | 64.17 | 58.33 |
| Zm00001d021557_P001 | Maize | cytosol | 66.25 | 58.24 |
| Bra022101.1-P | Field mustard | cytosol | 67.08 | 58.12 |
| VIT_02s0012g00080.t01 | Wine grape | cytosol | 64.17 | 57.89 |
| AT5G47080.1 | Thale cress | cytosol | 69.17 | 57.84 |
| PGSC0003DMT400004353 | Potato | cytosol | 69.58 | 57.39 |
| CDY40582 | Canola | cytosol | 65.83 | 57.25 |
| Solyc05g050680.2.1 | Tomato | nucleus | 67.5 | 56.84 |
| Solyc01g088740.2.1 | Tomato | cytosol | 67.5 | 56.64 |
| KRH57536 | Soybean | cytosol | 60.0 | 56.03 |
| AT4G17640.1 | Thale cress | cytosol | 65.83 | 56.03 |
| PGSC0003DMT400068359 | Potato | cytosol | 66.25 | 55.79 |
| Solyc06g061000.2.1 | Tomato | cytosol | 66.25 | 55.59 |
| CDX90462 | Canola | cytosol | 65.83 | 55.44 |
| Bra003407.1-P | Field mustard | cytosol | 61.67 | 55.43 |
| CDY64765 | Canola | cytosol | 61.67 | 55.43 |
| KRH04249 | Soybean | nucleus | 60.42 | 55.34 |
| Bra000359.1-P | Field mustard | cytosol | 63.33 | 55.27 |
| VIT_15s0021g01020.t01 | Wine grape | cytosol | 70.42 | 55.23 |
| CDY41181 | Canola | cytosol | 60.42 | 55.13 |
| Bra007520.1-P | Field mustard | cytosol | 60.42 | 55.13 |
| CDY09612 | Canola | cytosol | 65.42 | 55.09 |
| CDX83421 | Canola | cytosol | 62.92 | 54.91 |
| AT2G44680.1 | Thale cress | cytosol | 64.58 | 54.77 |
| CDX95610 | Canola | cytosol | 62.08 | 54.18 |
| CDX71824 | Canola | cytosol | 59.17 | 53.99 |
| CDX74677 | Canola | cytosol | 60.0 | 53.93 |
| Solyc10g061940.1.1 | Tomato | mitochondrion | 26.25 | 53.85 |
| Bra004856.1-P | Field mustard | cytosol | 58.33 | 53.44 |
| GSMUA_Achr8P14950_001 | Banana | cytosol | 62.92 | 53.17 |
| PGSC0003DMT400018024 | Potato | mitochondrion | 68.33 | 53.07 |
| CDX77739 | Canola | cytosol | 55.0 | 53.01 |
| CDY48249 | Canola | cytosol | 59.17 | 52.99 |
| Zm00001d006440_P003 | Maize | cytosol | 66.25 | 52.65 |
| AT3G60250.1 | Thale cress | cytosol | 59.17 | 51.45 |
| CDX78786 | Canola | cytosol | 60.0 | 51.43 |
| Bra040171.1-P | Field mustard | cytosol | 60.0 | 51.25 |
| Zm00001d000052_P004 | Maize | cytosol | 61.25 | 50.87 |
| CDY38414 | Canola | cytosol | 60.0 | 50.7 |
| Solyc10g061930.1.1 | Tomato | nucleus | 35.0 | 50.6 |
| GSMUA_Achr2P10400_001 | Banana | cytosol | 68.33 | 50.46 |
| GSMUA_Achr4P17860_001 | Banana | cytosol | 35.83 | 48.86 |
| CDY64781 | Canola | cytosol | 53.33 | 48.12 |
| Bra025515.1-P | Field mustard | cytosol | 53.75 | 47.96 |
| CDY48948 | Canola | cytosol | 53.75 | 47.6 |
| Bra012652.1-P | Field mustard | cytosol | 59.58 | 43.87 |
| Bra025463.1-P | Field mustard | cytosol | 50.42 | 43.21 |
| GSMUA_Achr4P17850_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 36.25 | 37.18 |
Protein Annotations
| Gene3D:1.10.1820.10 | MapMan:18.4.3.9.2 | Gene3D:2.20.25.20 | UniProt:A0A1D6E472 | InterPro:Casein_kin_II_reg-sub_N | InterPro:Casein_kinase_II_beta_like |
| InterPro:Casein_kinase_II_reg-sub | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005956 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 |
| GO:GO:0016310 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0019887 | GO:GO:0030234 | GO:GO:0045859 |
| InterPro:IPR016149 | ProteinID:ONM15312.1 | PFAM:PF01214 | PRINTS:PR00472 | ScanProsite:PS01101 | PANTHER:PTHR11740 |
| PANTHER:PTHR11740:SF15 | SMART:SM01085 | SUPFAM:SSF57798 | UniParc:UPI000844D8F9 | EnsemblPlantsGene:Zm00001d002778 | EnsemblPlants:Zm00001d002778_P001 |
| EnsemblPlants:Zm00001d002778_T001 | SEG:seg | : | : | : | : |
Description
CK2 regulatory subunit B1 CK2 regulatory subunit B1
Coordinates
chr2:-:22322661..22328202
Molecular Weight (calculated)
26595.0 Da
IEP (calculated)
4.414
GRAVY (calculated)
-0.537
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MHRDRGVSAA AIPGDRKRIG EPMDRSSPST SWGFSGGREK ERIGVGKQPE MPRSGGGSTA MSKSKLSDAE SETDSEESDV SGSDGEDTSW ISWFCSLKGN
101: EFFCEVDDDY IQDDFNLCGL SNQVPYYDYA LDLILDVESS HGDMLTEEQN ELIESAAEML YGLIHVRYII TSKGLSAMLD KYRNVEFGRC PRVNCSGQPC
201: LPVGQSDVPR SSTVKIYCPR CEDIYTPRSK YLSSILSFPL
101: EFFCEVDDDY IQDDFNLCGL SNQVPYYDYA LDLILDVESS HGDMLTEEQN ELIESAAEML YGLIHVRYII TSKGLSAMLD KYRNVEFGRC PRVNCSGQPC
201: LPVGQSDVPR SSTVKIYCPR CEDIYTPRSK YLSSILSFPL
001: MYRERGMVGS KSEVVDRKRI NEIHDNRPSH SMSQPVNGKG KVTSTSVLMG KQQLHDKESS RSGSISKTNI SDAVDISDTD SEESEVSGSD GEDTSWISWF
101: CNLRGNEFFC EVDDDYIQDD FNLCGLSHQV PYYDYALDLI LDVESSHGEM FTEEQNELIE SAAEMLYGMI HARFILTSKG LASMLDKYKN YDFGRCPRVY
201: CCGQPCLPVG QSDIPRASTV KIYCPKCEDV YYPRSKYQGN IDGAYFGTTF PHLFLMTYGH LKPQKASQSY TQRVFGFKLH KP
101: CNLRGNEFFC EVDDDYIQDD FNLCGLSHQV PYYDYALDLI LDVESSHGEM FTEEQNELIE SAAEMLYGMI HARFILTSKG LASMLDKYKN YDFGRCPRVY
201: CCGQPCLPVG QSDIPRASTV KIYCPKCEDV YYPRSKYQGN IDGAYFGTTF PHLFLMTYGH LKPQKASQSY TQRVFGFKLH KP
Arabidopsis Description
CKB2Casein kinase II subunit beta-2 [Source:UniProtKB/Swiss-Prot;Acc:P40229]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.