Factsheet for Bra040171.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78786	Canola	cytosol	96.44	96.79
TraesCS2D01G242000.2	Wheat	cytosol	70.11	73.23
TraesCS2A01G245100.1	Wheat	cytosol	70.11	72.69
Bra022101.1-P	Field mustard	cytosol	71.53	72.56
Bra007520.1-P	Field mustard	cytosol	67.26	71.86
Zm00001d021557_P001	Maize	cytosol	69.39	71.43
Bra003407.1-P	Field mustard	cytosol	67.26	70.79
EER91910	Sorghum	cytosol	65.84	70.61
KXG36270	Sorghum	cytosol	69.04	70.55
Bra000359.1-P	Field mustard	cytosol	69.04	70.55
Bra004856.1-P	Field mustard	cytosol	64.06	68.7
Os07t0495100-01	Rice	cytosol	69.04	67.36
TraesCSU01G007300.1	Wheat	cytosol	65.84	67.27
HORVU1Hr1G055250.1	Barley	cytosol	65.84	67.27
TraesCS1B01G229200.1	Wheat	cytosol	65.84	67.27
TraesCS1A01G215700.1	Wheat	cytosol	65.84	67.27
Os10t0564900-01	Rice	cytosol	66.55	67.03
Zm00001d029978_P001	Maize	cytosol	51.96	66.36
HORVU2Hr1G092930.1	Barley	cytosol	64.77	65.7
TraesCS2A01G390500.1	Wheat	cytosol	64.77	65.7
TraesCS2B01G408900.1	Wheat	cytosol	64.77	65.7
TraesCS2D01G388200.1	Wheat	cytosol	64.77	65.7
Zm00001d006440_P003	Maize	cytosol	69.39	64.57
TraesCSU01G129600.1	Wheat	cytosol, mitochondrion	56.94	63.24
TraesCS5A01G545600.3	Wheat	cytosol, mitochondrion	56.94	62.99
OQU82060	Sorghum	cytosol	61.57	62.23
TraesCS4B01G379300.1	Wheat	cytosol, mitochondrion	48.04	61.93
Zm00001d002778_P001	Maize	nucleus	51.25	60.0
Bra025515.1-P	Field mustard	cytosol	57.3	59.85
Bra025463.1-P	Field mustard	cytosol	58.36	58.57
HORVU4Hr1G090280.3	Barley	cytosol	55.87	57.93
Bra012652.1-P	Field mustard	cytosol	60.85	52.45
Zm00001d000052_P004	Maize	cytosol	49.82	48.44

Protein Annotations

Gene3D:1.10.1820.10	MapMan:18.4.3.9.2	Gene3D:2.20.25.20	EnsemblPlantsGene:Bra040171	EnsemblPlants:Bra040171.1	EnsemblPlants:Bra040171.1-P
InterPro:Casein_kin_II_reg-sub_N	InterPro:Casein_kinase_II_beta_like	InterPro:Casein_kinase_II_reg-sub	GO:GO:0003674	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005956	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0019538	GO:GO:0019887	GO:GO:0030234	GO:GO:0045859	InterPro:IPR016149	UniProt:M4FGE3
PFAM:PF01214	PRINTS:PR00472	ScanProsite:PS01101	PANTHER:PTHR11740	PANTHER:PTHR11740:SF15	SMART:SM01085
SUPFAM:SSF57798	UniParc:UPI0002545CC5	SEG:seg	:	:	:

Description

AT4G17640 (E=7e-121) CKB2 | CKB2; protein kinase CK2 regulator

Coordinates

chrA01:+:4456003..4457421

Molecular Weight (calculated)

31867.3 Da

IEP (calculated)

6.576

GRAVY (calculated)

-0.642

Length

281 amino acids

Sequence
(BLAST)

001: MYKERGTRGS KSEVVVVDQK RVNKAHDNHR ASHSMSHAVN GKGKAVAIGK QLHDHNARPS SLSKPTISDD VSDTDSEESE VSGSEGEDTS WVSWFCNLRG
101: NEFFCEVDED YIQDDFNLCG LNHQVPYYDY ALDLILDVDF SQGERFTDEQ NELVESAAEM LYGMIHARYI LTSKGLASML DKYKNYDFGR CPRVYCCGQP
201: CLPVGQSDIP RSSTVKIYCP KCEDVYYPRS KYQGKKKTDI DGAYFGTTFP HLFLMTYGHL KPQKAAQSYV PRVFGFKLHK P

Best Arabidopsis Sequence Match ( AT4G17640.1 )
(BLAST)

001: MYRERGMVGS KSEVVDRKRI NEIHDNRPSH SMSQPVNGKG KVTSTSVLMG KQQLHDKESS RSGSISKTNI SDAVDISDTD SEESEVSGSD GEDTSWISWF
101: CNLRGNEFFC EVDDDYIQDD FNLCGLSHQV PYYDYALDLI LDVESSHGEM FTEEQNELIE SAAEMLYGMI HARFILTSKG LASMLDKYKN YDFGRCPRVY
201: CCGQPCLPVG QSDIPRASTV KIYCPKCEDV YYPRSKYQGN IDGAYFGTTF PHLFLMTYGH LKPQKASQSY TQRVFGFKLH KP

Arabidopsis Description

CKB2Casein kinase II subunit beta-2 [Source:UniProtKB/Swiss-Prot;Acc:P40229]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.